| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 561,696 | (G)6→7 | coding (2000/2604 nt) | sfmD → | putative outer membrane export usher protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 561,690 | 1 | . | G | 99.0% | 378.6 / ‑3.0 | 102 | coding (1994/2604 nt) | sfmD | putative outer membrane export usher protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (49/52); total (49/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 112 total aligned reads displayed.
AAGGCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑GGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTG > NC_000913/561591‑561781 | aaGGCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCt > 1:2571166/1‑100 (MQ=255) gCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑ggg > 2:1215812/1‑100 (MQ=255) gCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑ggg > 2:1527016/1‑100 (MQ=255) ccACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑gggg < 1:1161996/100‑1 (MQ=255) ccACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑gggg > 2:1207126/1‑100 (MQ=255) ccACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑gggg < 2:1678892/100‑1 (MQ=255) acaACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑ggggg‑g > 2:2551449/1‑100 (MQ=255) caACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑ggg > 2:3059139/1‑96 (MQ=255) ccTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑ggggg‑ggcgg < 2:861557/100‑5 (MQ=255) tgcgTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCAACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑ggggg‑ggcggg < 2:2905021/96‑6 (MQ=255) tGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGt < 2:3149285/100‑1 (MQ=255) gAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGta < 1:2152039/100‑1 (MQ=255) gAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGta < 1:1768642/100‑1 (MQ=255) aGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGtat < 2:1649358/100‑1 (MQ=255) gTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGtata > 1:2183476/1‑100 (MQ=255) gTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGtata < 1:3387845/100‑1 (MQ=255) gTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGtata < 1:3225371/100‑1 (MQ=255) gTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGtata < 2:384812/100‑1 (MQ=255) tATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATaa > 1:2820723/1‑99 (MQ=255) tATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAAc < 1:1904825/100‑1 (MQ=255) aTCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACt > 1:1860741/1‑100 (MQ=255) cACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTAc > 1:1672466/1‑100 (MQ=255) cggaaGCCAGGGTGAGACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACg < 1:875813/96‑1 (MQ=255) cGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGa > 1:1023246/1‑100 (MQ=255) gTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGAc > 2:1260461/1‑100 (MQ=255) aGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACcgc > 2:3302139/1‑100 (MQ=255) gCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACcgcg < 1:252164/100‑1 (MQ=255) gCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACcgcg < 2:3341156/100‑1 (MQ=255) ccAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGa > 2:316125/1‑100 (MQ=255) ccAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGa < 1:1057415/100‑1 (MQ=255) cAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGAt < 2:961448/100‑1 (MQ=255) cAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGAt < 2:3252717/100‑1 (MQ=255) cAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGAt < 2:917861/100‑1 (MQ=255) aGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATc < 2:1333595/100‑1 (MQ=255) aGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATc < 1:945300/100‑1 (MQ=255) aGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATc < 1:691603/100‑1 (MQ=255) gggTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCa < 1:2671738/100‑1 (MQ=255) gggTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCa < 2:1679046/100‑1 (MQ=255) gggTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCa > 2:2401913/1‑100 (MQ=255) aTACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATg > 2:1783751/1‑100 (MQ=255) tACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGa > 2:804545/1‑100 (MQ=255) tACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGa > 1:3008578/1‑100 (MQ=255) tACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGa > 2:2847848/1‑100 (MQ=255) aCCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGAc > 2:1215249/1‑100 (MQ=255) aCCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGAc > 1:2991814/1‑100 (MQ=255) aCCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGAc < 1:1350574/100‑1 (MQ=255) cTCGAATAATGGGTACACGGGCGGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGt > 2:1974725/1‑100 (MQ=255) tCGAATAATGGGTACACGGGCAGCGCCACGGCAAACGGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGtt < 2:612537/100‑1 (MQ=255) ataatGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACt < 1:916771/100‑1 (MQ=255) tGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCa > 2:2428361/1‑100 (MQ=255) tGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCa < 2:3008566/100‑1 (MQ=255) tGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCa > 1:3141337/1‑100 (MQ=255) gggTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAg < 1:2425916/100‑1 (MQ=255) gggTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAg < 1:2425897/100‑1 (MQ=255) ggTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGc < 2:359784/100‑1 (MQ=255) ggTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGc > 1:1426976/1‑100 (MQ=255) ggTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGc < 1:54247/100‑1 (MQ=255) tACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTg < 1:316126/100‑1 (MQ=255) tACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTg < 1:2847858/100‑1 (MQ=255) tACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTg > 2:104770/1‑100 (MQ=255) cGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTg > 2:3103345/1‑100 (MQ=255) cGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTg > 1:811070/1‑100 (MQ=255) cGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTg > 2:3301759/1‑100 (MQ=255) ggCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGc < 1:2814044/100‑1 (MQ=255) naGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCgg > 2:1442206/2‑100 (MQ=255) cAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCgg < 1:1783755/100‑1 (MQ=255) aGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGgt < 2:2303661/100‑1 (MQ=255) gcgcCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGgtg < 1:1207129/100‑1 (MQ=255) gcCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGtgtg < 1:3301772/100‑1 (MQ=255) gcCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGtgtg > 1:3167364/1‑100 (MQ=255) gcCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGtgtg > 2:3038449/1‑100 (MQ=255) gcCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGtgtg > 2:3035529/1‑100 (MQ=255) ttccgatctcTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGt < 1:471688/91‑1 (MQ=255) aCGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTc > 1:2898805/1‑100 (MQ=255) aCGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTc > 1:320564/1‑100 (MQ=255) aCGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCCCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTATGGTc > 2:1106514/1‑100 (MQ=255) cGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCg > 1:1823634/1‑100 (MQ=255) ggCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCgg < 1:2428369/100‑1 (MQ=255) gCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCggg > 1:2882492/1‑100 (MQ=255) ctaaaCTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCggg < 2:1513014/98‑1 (MQ=255) cAAACTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGc > 2:947564/1‑100 (MQ=255) aaaCTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCgggag > 1:1513017/1‑98 (MQ=255) aaCTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGCTCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGGGGTCgcgc > 2:1175123/1‑98 (MQ=255) cTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGtagatcggaa > 2:471687/1‑91 (MQ=255) cTGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGa < 1:2401920/100‑1 (MQ=255) tGGCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGaa > 2:939058/1‑100 (MQ=255) gCAGGCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGaaaa < 1:2506425/100‑1 (MQ=255) gCAGGCCGCTCACGGTACGCT‑GGGGGCGCTGTTATAACTACGACCGCGATCAACATGACGTTAACTAGCAGCTGTCTGGCGGTGTGGTCGGGCATGaaaa < 2:2850398/100‑1 (MQ=255) ggCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATgg < 1:3287994/100‑1 (MQ=255) ggCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATgg > 1:428066/1‑100 (MQ=255) ggCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATgg > 2:766301/1‑100 (MQ=255) ctccGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATgg < 1:1354945/98‑1 (MQ=255) gCCGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGc > 2:2939669/1‑100 (MQ=255) ccGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATggag > 2:1354942/1‑98 (MQ=255) ccGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCa < 1:3059151/100‑1 (MQ=255) ccGCTTACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCa < 2:2714744/100‑1 (MQ=255) ttACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATaa > 1:2876844/1‑99 (MQ=255) ttACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAAc < 2:2876833/100‑1 (MQ=255) tACGGTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACg < 1:1215815/100‑1 (MQ=255) ggTACGCTGGGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTg > 2:3386947/1‑100 (MQ=255) | AAGGCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCT‑GGGGG‑GCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTG > NC_000913/561591‑561781 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |