| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,737,721 | (T)6→7 | intergenic (+75/‑24) | pheL → / → pheA | pheA gene leader peptide/chorismate mutase and prephenate dehydratase, P‑protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,737,715 | 1 | . | T | 94.4% | 310.3 / 10.1 | 90 | intergenic (+69/‑30) | pheL/pheA | pheA gene leader peptide/chorismate mutase and prephenate dehydratase, P‑protein |
| Reads supporting (aligned to +/- strand): ref base . (1/4); new base T (38/47); total (39/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 106 total aligned reads displayed.
TCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑TTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATGAAAAATT > NC_000913/2737618‑2737806 | tcttcGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑tt > 1:716356/1‑100 (MQ=255) cttcGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTTGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑ttt > 1:511752/1‑100 (MQ=255) ttcGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑ttt‑t > 1:532161/1‑100 (MQ=255) ttcGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑ttt‑t > 1:2955862/1‑100 (MQ=255) cGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑ttt‑tt‑t < 2:209452/100‑1 (MQ=255) cGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑ttt‑tt‑t < 2:1227400/100‑1 (MQ=255) cGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑ttt‑tt‑t < 1:3405516/100‑1 (MQ=255) cGCATTCTTTTTTACCTTCCCCTGAAGGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCCCCCGATTTGGGAGGCC‑tta‑ttg < 2:2898726/100‑2 (MQ=37) gCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑ttt‑tt‑tt > 2:2780160/1‑99 (MQ=255) gCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑ttt‑tt‑tt < 1:2960358/100‑2 (MQ=255) ttCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑ttt‑tt‑ttatt < 1:3294263/100‑5 (MQ=255) ttCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑ttt‑tt‑ttatt < 1:2057037/100‑5 (MQ=255) ttCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑ttt‑tt‑ttatt < 1:891758/100‑5 (MQ=255) ntCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACCATAAGTCCTCCCAGATCGGTGGGCC‑ttt‑tt‑ttatt > 2:2900649/2‑96 (MQ=255) tCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑ttt‑tt‑ttattg < 2:1390187/100‑6 (MQ=255) cTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGa < 2:3247715/100‑1 (MQ=255) cTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGa < 1:536998/100‑1 (MQ=255) tttttACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATa < 2:1044248/100‑1 (MQ=255) tttACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAAc < 1:1948077/100‑1 (MQ=255) ttACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACa < 2:830168/100‑1 (MQ=255) tACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACaa > 1:2946199/1‑100 (MQ=255) aCCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACaaa > 2:3023932/1‑100 (MQ=255) ccTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACaaaa < 1:118500/100‑1 (MQ=255) ccTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACaaaa > 1:868167/1‑100 (MQ=255) cTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACaaaaa > 1:2916628/1‑100 (MQ=255) ttCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAg < 2:2946187/100‑1 (MQ=255) ccccTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGc < 1:1519278/100‑1 (MQ=255) cccTGAATGGGAGGCGTTTCGTCGTGTGAAACATAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCa > 2:2248093/1‑100 (MQ=255) ttGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAac < 2:1897320/99‑1 (MQ=255) cTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAac > 2:1291007/1‑100 (MQ=255) tGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAaca > 1:1897324/1‑100 (MQ=255) gAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAacac > 2:79818/1‑100 (MQ=255) tGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTAt < 1:554133/100‑1 (MQ=255) gggAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATg < 2:1304709/100‑1 (MQ=255) gggAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑TTTCTT‑T‑ATTGATAACAAAAAGGCAACACTATg > 2:1548150/1‑100 (MQ=255) gggAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACAAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACt < 1:1291010/97‑1 (MQ=255) ccgatctgTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATg < 2:3254660/93‑1 (MQ=255) ggAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGa > 2:2964026/1‑100 (MQ=255) aGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACa < 1:729442/100‑1 (MQ=255) ggCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAGTAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACAt > 2:2836231/1‑100 (MQ=255) gCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATc < 2:1613166/100‑1 (MQ=255) gTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGAGATCgg > 1:3254673/1‑100 (MQ=255) gTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCgg > 2:2952680/1‑100 (MQ=255) gTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCgg > 2:3000819/1‑100 (MQ=255) cgtcgtGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGaaaa < 1:1464594/100‑1 (MQ=255) gtcgtGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAAc < 2:2916617/100‑1 (MQ=255) gtcgtGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAAc > 2:478370/1‑100 (MQ=255) gtcgcGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑TTT‑TT‑T‑ATTAATAACAAAAAGGCAACACTATGACATCGGAAAAc < 2:3073414/99‑1 (MQ=255) cgtGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAAccc > 2:522104/1‑100 (MQ=255) gtgtGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCg > 1:618404/1‑100 (MQ=255) gtgtGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCg > 1:1604210/1‑100 (MQ=255) tgtgAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGt < 1:2704866/100‑1 (MQ=255) tgtgAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGt > 2:344574/1‑100 (MQ=255) gtgAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGtt < 2:2224460/100‑1 (MQ=255) gAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTAc > 1:2816963/1‑100 (MQ=255) gAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTAc > 1:2558736/1‑100 (MQ=255) gAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTAc < 1:1564860/100‑1 (MQ=255) gAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTAc > 1:1493525/1‑100 (MQ=255) gAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTAc < 1:1343653/100‑1 (MQ=255) gAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTAc > 2:968650/1‑100 (MQ=255) gAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑AATGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTAc > 2:2175027/1‑100 (MQ=255) aaaCAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTACGACATCGGAAAACCCGttcc > 2:2663129/1‑97 (MQ=255) aaCAGAATGCGACGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTg > 1:2229297/1‑100 (MQ=255) aCAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTgg < 2:134656/100‑1 (MQ=255) cAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACCTCGGAAAACCCGTTACTGgc < 2:2075694/100‑1 (MQ=255) cAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGgc < 2:507551/100‑1 (MQ=255) cAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGgc < 2:926991/100‑1 (MQ=255) cAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGgc < 2:507767/100‑1 (MQ=255) aGAATGCGAAGACGAACAATAAGCCCTCCCAAATCGGGGGGCC‑TTT‑TTAA‑AAAAAAAAAAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGgcg < 2:674335/100‑1 (MQ=255) gCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCg > 1:75714/1‑100 (MQ=255) gCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCg < 2:3140864/100‑1 (MQ=255) gCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCg > 1:697209/1‑100 (MQ=255) gCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑TTT‑TT‑TAATAAAAAAAAAAAAGGCGACACTATGACATCGGAAAACCCGTTACTGGCGCTGCg < 2:1825959/100‑1 (MQ=255) gAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCgag > 1:1488008/1‑100 (MQ=255) gAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCgag < 1:1806062/100‑1 (MQ=255) aaGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCtaga < 1:630913/100‑1 (MQ=255) aaGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCgaga < 2:618403/100‑1 (MQ=255) aaGACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCgaga < 2:532160/100‑1 (MQ=255) gACGAATAATAAGGCCTCCCAAAGCGGGGGGCCTTTT‑TT‑T‑ATTGAGAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCgagaga < 2:1493522/100‑1 (MQ=255) gACGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCgagaga < 1:407928/100‑1 (MQ=255) cGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGaaa < 2:75715/100‑1 (MQ=255) cGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGaaa > 1:330956/1‑100 (MQ=255) cGAACAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGaaa > 1:1253016/1‑100 (MQ=255) aaCAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAAt < 2:2558728/100‑1 (MQ=255) aaCAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAAt > 2:2872882/1‑100 (MQ=255) aCAATAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATc < 1:1257284/100‑1 (MQ=255) tAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAgcg < 1:2952692/100‑1 (MQ=255) tAAGGCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAgcg < 2:2955850/100‑1 (MQ=255) tAAGGCCTCCCAAATCGGGGGGCC‑TTTCTT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAgcg < 1:1548153/100‑1 (MQ=255) ggCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAgcgcgc < 2:1722714/100‑1 (MQ=255) gCCTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCt < 1:969827/100‑1 (MQ=255) ccTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTg < 1:2780171/100‑1 (MQ=255) cTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTgg < 2:697209/100‑1 (MQ=255) cTCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTgg < 2:2856167/100‑1 (MQ=255) tCCCAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGa > 2:1447592/1‑100 (MQ=255) cccAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGAt < 2:511751/100‑1 (MQ=255) ccAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTgg < 2:1737985/97‑1 (MQ=255) ccAAATCGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATg > 1:15751/1‑100 (MQ=255) cGGGGGGCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATGAAAAat > 1:2976766/1‑100 (MQ=255) ggggggCCTTTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATGAAAAatt < 2:522220/100‑1 (MQ=255) | TCTTCGCATTCTTTTTTACCTTCCCCTGAATGGGAGGCGTTTCGTCGTGTGAAACAGAATGCGAAGACGAACAATAAGGCCTCCCAAATCGGGGGGCC‑TTT‑TT‑T‑ATTGATAACAAAAAGGCAACACTATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATGAAAAATT > NC_000913/2737618‑2737806 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |