| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,947,713 | (T)7→8 | intergenic (+30/+44) | metV → / ← amiC | tRNA‑Met/N‑acetylmuramoyl‑L‑alanine amidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,947,706 | 1 | . | T | 95.9% | 337.5 / 6.1 | 98 | intergenic (+23/+51) | metV/amiC | tRNA‑Met/N‑acetylmuramoyl‑L‑alanine amidase |
| Reads supporting (aligned to +/- strand): ref base . (4/0); new base T (50/44); total (54/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 115 total aligned reads displayed.
CGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCAAAATACGCTTTAA > NC_000913/2947609‑2947803 | cgGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑tt > 1:978096/1‑100 (MQ=255) ggggTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑ttt > 2:2044103/1‑100 (MQ=255) gggTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑tttt < 1:405819/100‑1 (MQ=255) gggTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑tttt > 1:1481556/1‑100 (MQ=255) gcgTGGAGCAGCCTGGTAGCTCGCCGGGCTCATACCCCGCAGTTCGTCGATTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑tttt < 2:1471033/98‑1 (MQ=18) ggTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAATCAATTATTGAACACCCTAACGGGT‑G‑‑tttt‑t < 2:2239486/100‑1 (MQ=255) tGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑tttt‑ttt < 1:255645/100‑1 (MQ=255) ggAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCTCAACCAATTATTGAACACCCTAACGGGT‑G‑‑tttt‑tttt < 2:141659/100‑2 (MQ=255) ggAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑tttt‑tttt > 1:2358313/1‑99 (MQ=255) ggAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑tttt‑tttt < 1:732313/100‑2 (MQ=255) gAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑tttt‑ttttg < 2:285748/100‑3 (MQ=255) gAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑tttt‑ttttg < 1:3380978/100‑3 (MQ=255) gcagcCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑tttt‑ttttgtt < 2:2122632/100‑5 (MQ=255) agcCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑TTTTCTTTGATTc > 2:2326492/1‑100 (MQ=255) gcCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCt > 1:1340502/1‑100 (MQ=255) gcCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCt < 1:399290/100‑1 (MQ=255) ctcTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCt < 2:805468/98‑1 (MQ=255) ccTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTg < 1:1393498/100‑1 (MQ=255) cTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCtag > 1:805468/1‑98 (MQ=255) tGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGt < 1:1806185/100‑1 (MQ=255) ggTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGtc < 1:436694/100‑1 (MQ=255) ggTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGtc > 2:3120074/1‑100 (MQ=255) accTCGTCCGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGtc < 2:3318009/95‑1 (MQ=21) aGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTcc > 2:328938/1‑100 (MQ=255) cTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCa < 2:2358306/100‑1 (MQ=255) cgtcgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATa > 1:3108201/1‑100 (MQ=255) cgtcgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATa < 2:2031330/100‑1 (MQ=255) cgtcgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATa > 1:1034753/1‑100 (MQ=255) cgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATaaaa > 2:2568568/1‑100 (MQ=255) gggCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATaaaaa > 1:1448271/1‑100 (MQ=255) ggCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATaaaaaa > 1:10359/1‑100 (MQ=255) gCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCACCGCCACCGATTATTGAACCCCATAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATaaaaaa < 2:280550/99‑1 (MQ=25) tCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAgcg > 2:2567710/1‑100 (MQ=255) tCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAgcg < 2:1034752/100‑1 (MQ=255) cATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAgcgc < 2:1719723/100‑1 (MQ=255) cATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAgcgc < 1:1951471/100‑1 (MQ=255) cATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGcc > 2:769512/1‑100 (MQ=255) aTAACCCGAAGGTAGTCGGTTCAAATCCGGCGCCCGCAACCAATCATTTAACACCCTAACGGGC‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATaa > 2:154671/1‑91 (MQ=21) tAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCa < 1:876134/100‑1 (MQ=255) tAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCa > 2:2140963/1‑100 (MQ=255) aCCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCCACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCAtt > 1:1839285/1‑100 (MQ=255) cccGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTTGTCTCCCATAAAAAAGCGCCAt > 2:2060172/1‑98 (MQ=255) cccGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTc > 2:1529021/1‑100 (MQ=255) ccGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCa < 2:3108189/100‑1 (MQ=255) ccGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCa > 2:516336/1‑100 (MQ=255) aGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAgcg < 1:1242259/99‑1 (MQ=255) ggTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGcc > 2:1115606/1‑100 (MQ=255) gtcgtcGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCt > 2:943824/1‑100 (MQ=255) ttccgatctaaaTCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCttt < 1:2080337/91‑1 (MQ=255) cgGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTa > 1:1109849/1‑100 (MQ=255) cgGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTa < 1:516337/100‑1 (MQ=255) cgGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTa > 1:2130079/1‑100 (MQ=255) ggTTCAAATCCGGCCCCCGCAACCAATTATTGAACACGCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTat > 2:1825655/1‑100 (MQ=255) ggTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GTTTTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTa > 1:3147052/1‑100 (MQ=255) ggTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTat > 1:1755828/1‑100 (MQ=255) gctCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTatc > 1:2309905/3‑100 (MQ=255) gTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTatc < 1:2060176/100‑1 (MQ=255) gTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTat > 1:532195/1‑99 (MQ=255) tCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTatcat < 1:1115608/100‑1 (MQ=255) cAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTatcatc < 1:2567718/100‑1 (MQ=255) cAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATcc > 1:276039/1‑100 (MQ=255) aaaTCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATcc > 2:2497149/1‑100 (MQ=255) aaaTCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATcc < 1:3214097/100‑1 (MQ=255) aaTCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATccc > 1:2349675/1‑100 (MQ=255) aTCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATcccc < 1:1529024/100‑1 (MQ=255) aTCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGG‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATcccc > 1:1653810/1‑100 (MQ=255) tCCGGCCCCCGCAACCGATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCt < 2:978095/100‑1 (MQ=255) tCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCt < 2:1544680/100‑1 (MQ=255) tCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCt < 2:1448268/100‑1 (MQ=255) ggCCCCCGCAACCGATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTtct > 1:2287306/1‑100 (MQ=255) ggCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGATTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTtct > 2:1893011/1‑100 (MQ=255) gCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTtctc < 2:1769494/100‑1 (MQ=255) gCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTtctc < 1:1465307/100‑1 (MQ=255) cccccGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCg < 2:1002521/100‑1 (MQ=255) ccccGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGc < 2:1481553/100‑1 (MQ=255) ccGCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCa > 1:3248885/1‑100 (MQ=255) gCAACCAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCACCATTCAGCGCCTTATTATCATCCCCTTCTCGCCAGc > 2:2289500/1‑100 (MQ=255) ccAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCg > 2:381018/1‑100 (MQ=255) ccAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTAAGCGCCTTTTTATCATCACCTTCTCGCCAGCGTCg > 2:381113/1‑100 (MQ=255) cAATTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGc > 1:2631353/1‑100 (MQ=255) aaTTATTGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGcc < 1:1893015/100‑1 (MQ=255) attattGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGccc < 2:1656289/100‑1 (MQ=255) attattGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGccc < 2:1714262/100‑1 (MQ=255) tattGAACACCCTAACGGGTGG‑‑TTTT‑TTTGTGTCTGTTCACCCATAAAAAAGCGCCATTCAACGCCTTTTTATCATCCCCTTCTCGCCAGCGTCTCCCCa > 2:1841062/1‑100 (MQ=255) attGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCAt > 1:2656236/1‑100 (MQ=255) tGAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCg < 2:532194/100‑1 (MQ=255) gAACACCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCgg > 2:1137480/1‑100 (MQ=255) cacCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCaa < 1:193538/100‑1 (MQ=255) cacCCTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCaa > 1:3312169/1‑100 (MQ=255) cccTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATACAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCaaaa > 2:1830165/1‑100 (MQ=255) cccTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCaaaa < 2:2309899/100‑1 (MQ=255) ccTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCAAAAt < 1:2126981/100‑1 (MQ=255) ccTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCAAAAt > 2:2809288/1‑100 (MQ=255) ccTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCAAAAt < 2:1380440/100‑1 (MQ=255) ccTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCAAAAt < 1:1137483/100‑1 (MQ=255) cTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCAAAATa > 1:556807/1‑100 (MQ=255) cTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCAAAATa > 2:679676/1‑100 (MQ=255) cTAACGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCAAAATa > 1:1835974/1‑100 (MQ=255) aCGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCAAAATACGc < 1:980753/100‑1 (MQ=255) cGGGT‑GT‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCAAAATACGCt < 1:227311/100‑1 (MQ=255) | CGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGT‑G‑‑TTTT‑TTTGTTTCTGGTCTCCCATAAAAAAGCGCCATTCAGCGCCTTTTTATCATCCCCTTCTCGCCAGCGTCGCCCCATCGGCAAAATACGCTTTAA > NC_000913/2947609‑2947803 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |