BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	669,244	T→C	intergenic (‑208/+52)	rsfS ← / ← cobC	ribosomal silencing factor/putative alpha‑ribazole‑5'‑P phosphatase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	669,244	0	T	C	100.0%	448.2 / NA	119	intergenic (‑208/+52)	rsfS/cobC	ribosomal silencing factor/putative alpha‑ribazole‑5'‑P phosphatase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (63/56); total (63/56)

Only 100 of 124 total aligned reads displayed.

CCCACCCCGCGCCGCAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCTGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAGGACGCGTAG  >  NC_000913/669148‑669340

cccACCCCGCGCCGCAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGcc                                                                                               >  1:1835009/1‑100 (MQ=255)

 ccACCCCGCGCCGCAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAgcccgccc                                                                                              <  1:2349248/100‑1 (MQ=255)

 ccACCCCGCGCCGCAGATTGCATCGCCATTTTTATAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAGGTCTGGCTGCGGAGAATATCAgcccgccc                                                                                              >  2:2042687/1‑100 (MQ=255)

  cACCCCGCGCCGCAGATTGCATCGCCATTTTTCTAAAACCATGTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGcccgcccg                                                                                             <  2:2387024/100‑1 (MQ=255)

   aCCCCGCGCCGCAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCgg                                                                                            <  1:2617233/100‑1 (MQ=255)

    ccccGCGCCGCAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCggg                                                                                           <  1:1049305/100‑1 (MQ=255)

      ccGCGCCGCAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTc                                                                                         <  1:1146085/100‑1 (MQ=255)

      ccGCGCCGCAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTc                                                                                         <  1:435312/100‑1 (MQ=255)

         cgccgcAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGt                                                                                      <  2:3124192/100‑1 (MQ=255)

          gccgcAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTc                                                                                     >  2:1520685/1‑100 (MQ=255)

          gccgcAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTc                                                                                     >  1:279997/1‑100 (MQ=255)

             gcAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAAt                                                                                  <  1:2184766/100‑1 (MQ=255)

             gcAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAAt                                                                                  >  1:3342561/1‑100 (MQ=255)

             gcAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAAt                                                                                  >  2:2151881/1‑100 (MQ=255)

             gcAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAAt                                                                                  >  2:1051093/1‑100 (MQ=255)

             gcAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAAt                                                                                  <  2:1156098/100‑1 (MQ=255)

                gATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGt                                                                               >  2:1529158/1‑100 (MQ=255)

                gATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGt                                                                               >  2:1806812/1‑100 (MQ=255)

                gATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGt                                                                               >  1:1968652/1‑100 (MQ=255)

                     cATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTg                                                                          <  1:1051094/100‑1 (MQ=255)

                      aTCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGc                                                                         >  1:2788483/1‑100 (MQ=255)

                      aTCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGc                                                                         <  2:3093508/100‑1 (MQ=255)

                       tCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCg                                                                        >  2:2807792/1‑100 (MQ=255)

                        cGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCgg                                                                       <  1:2042691/100‑1 (MQ=255)

                        cGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCgg                                                                       >  2:517990/1‑100 (MQ=255)

                         gCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCATTGGTCGTTGCGGc                                                                      <  2:2107043/100‑1 (MQ=255)

                         gCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGc                                                                      >  1:2094750/1‑100 (MQ=255)

                         gCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGc                                                                      >  1:618476/1‑100 (MQ=255)

                         gCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGc                                                                      >  1:1426831/1‑100 (MQ=255)

                         gCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGc                                                                      >  1:2188184/1‑100 (MQ=255)

                         gCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGc                                                                      <  2:204039/100‑1 (MQ=255)

                           cATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCtt                                                                    <  2:1426828/100‑1 (MQ=255)

                            aTTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTa                                                                   >  2:2403455/1‑100 (MQ=255)

                            aTTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTa                                                                   >  2:597054/1‑100 (MQ=255)

                             tttttGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTAc                                                                  <  2:2788473/100‑1 (MQ=255)

                              ttttGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATTAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTAcc                                                                 <  2:2094746/100‑1 (MQ=255)

                                ttGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCg                                                               <  2:3323070/100‑1 (MQ=255)

                                ttGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCg                                                               <  2:2969063/100‑1 (MQ=255)

                                 tGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGt                                                              <  1:2530322/100‑1 (MQ=255)

                                  gatctaCAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTa                                                             <  2:2137934/95‑1 (MQ=255)

                                   tAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTaa                                                            >  1:1278934/1‑100 (MQ=255)

                                   tAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTaa                                                            <  2:1968648/100‑1 (MQ=255)

                                    aaaaCAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTaaa                                                           >  1:2437448/1‑100 (MQ=255)

                                     aaaCAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTaaaa                                                          >  1:619854/1‑100 (MQ=255)

                                      aaCAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTaaaaa                                                         <  1:1519832/100‑1 (MQ=255)

                                       aCAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTaggatc                                                        >  1:2137939/1‑95 (MQ=255)

                                          aTTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACa                                                     <  1:1256710/100‑1 (MQ=255)

                                          aTTTCTACAAAGTCGTGTCTGGCGGAAAAAGCCTGGCTGCGGGGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACa                                                     >  1:2299013/1‑100 (MQ=255)

                                           tttCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAg                                                    >  2:577729/1‑100 (MQ=255)

                                           tttCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAg                                                    <  1:1520688/100‑1 (MQ=255)

                                             tCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGaa                                                  >  1:59540/1‑100 (MQ=255)

                                              cTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGaaa                                                 <  2:2191343/100‑1 (MQ=255)

                                               tACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGaaaa                                                >  2:617584/1‑100 (MQ=255)

                                               tACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGaaa                                                 >  1:1507829/1‑99 (MQ=255)

                                                aCAAAGTCTTGTCTTGCGGAAAAAGTCTGGCTGCGGGGAATATCCCCCCGCACGGGTCTGTCAATGGTCGTTGCGGAATAAAAAAAAAAAAACAGaa                                                  <  2:2152070/97‑1 (MQ=255)

                                                aCAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAg                                               <  1:1148951/100‑1 (MQ=255)

                                                aCAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGAAAAAAAAAAAAAAAACAGAAAAg                                               <  2:1769303/100‑1 (MQ=255)

                                                 cAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAgn                                              <  2:2625929/100‑2 (MQ=255)

                                                 cAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGt                                              >  2:3156668/1‑100 (MQ=255)

                                                  aaaGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTc                                             <  2:1586955/100‑1 (MQ=255)

                                                  aaaGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTc                                             >  1:714125/1‑100 (MQ=255)

                                                  aaaGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTc                                             <  1:2151886/100‑1 (MQ=255)

                                                          gtCTGGCGGAAAAAGTCTGGCTGCGGAGAATGTCAGCTCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATtc                                     <  2:2299007/100‑1 (MQ=255)

                                                           tCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATtct                                    >  2:92135/1‑100 (MQ=255)

                                                            cTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATtctn                                   <  1:1383865/100‑2 (MQ=255)

                                                            cTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATtctc                                   <  2:955433/100‑1 (MQ=255)

                                                            cTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATtctc                                   >  1:2604087/1‑100 (MQ=255)

                                                             tGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCg                                  <  1:1105758/100‑1 (MQ=255)

                                                             tGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCg                                  <  2:3342548/100‑1 (MQ=255)

                                                             tGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCg                                  >  1:451781/1‑100 (MQ=255)

                                                              ggCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGa                                 >  2:1024739/1‑100 (MQ=255)

                                                              ggCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGa                                 >  2:2272740/1‑100 (MQ=255)

                                                                   aaaaaGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCg                            >  1:1744354/1‑100 (MQ=255)

                                                                     aaaGTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGAt                          <  1:629723/100‑1 (MQ=255)

                                                                        gTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGc                       >  1:1568293/1‑100 (MQ=255)

                                                                        gTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGc                       >  1:1953575/1‑100 (MQ=255)

                                                                        gTCTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGc                       >  1:2425994/1‑100 (MQ=255)

                                                                          cTGGCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCAc                     <  2:59540/100‑1 (MQ=255)

                                                                           tGGCTCGGGAGAATATCGTCCCGCCCGGGTCTGTCAATGGTCGTTGCTGCTTTCCCGTAAAAAAACAGAAAAGTCTTGCATTTGCGACCCCGATGGCACg                    <  2:1511101/100‑1 (MQ=255)

                                                                             gCTGCGGTGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGc                  <  2:1835005/100‑1 (MQ=255)

                                                                             gCTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGc                  <  2:1279595/100‑1 (MQ=255)

                                                                              cTGCGGAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGc                  <  2:2141855/99‑1 (MQ=255)

                                                                                  ggAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTg             <  2:714125/100‑1 (MQ=255)

                                                                                  ggAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTg             >  1:2818988/1‑100 (MQ=255)

                                                                                  ggAGAATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTg             <  2:1473371/100‑1 (MQ=255)

                                                                                    agaATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAg           <  1:597055/100‑1 (MQ=255)

                                                                                     naaTATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAgg          >  1:2717420/2‑100 (MQ=255)

                                                                                     gaATATCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAgg          >  2:2769131/1‑100 (MQ=255)

                                                                                       atatCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAGGAc        <  1:92134/100‑1 (MQ=255)

                                                                                       atatCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAGGAc        >  1:593827/1‑100 (MQ=255)

                                                                                       atatCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAGGAc        >  1:3385042/1‑100 (MQ=255)

                                                                                        tatCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAATGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAGGAcg       <  2:1868336/100‑1 (MQ=255)

                                                                                        tatCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAGGAcg       >  1:2377228/1‑100 (MQ=255)

                                                                                        tatCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCAACCCCGATGGCACGGCTATTGAGGAcg       <  1:2525305/100‑1 (MQ=255)

                                                                                          tCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAGGAcgcg     >  1:1681978/1‑100 (MQ=255)

                                                                                          tCAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAGGAcgcg     >  2:758190/1‑100 (MQ=255)

                                                                                          ncAGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAGGAcgcg     >  1:1496599/2‑100 (MQ=255)

                                                                                            aGCCCGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAGGACGCGTa   >  2:3015050/1‑100 (MQ=255)

                                                                                             gcccgcccGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAGGACGCGTAg  >  1:570492/1‑100 (MQ=255)

                                                                                             gcccgcccGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAGGACGCGTAg  >  1:943435/1‑100 (MQ=255)

CCCACCCCGCGCCGCAGATTGCATCGCCATTTTTGTAAAACAATTTCTACAAAGTCGTGTCTGGCGGAAAAAGTCTGGCTGCGGAGAATATCAGCCTGCCCGGGTCTGTCAATGGTCGTTGCGGCTTACCCGTAAAAAAACAGAAAAGTCATGCATTCTCGACCCCGATGGCACGGCTATTGAGGACGCGTAG  >  NC_000913/669148‑669340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`