BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,212,535	A→G	intergenic (‑532/+168)	iraM ← / ← ycgX	RpoS stabilzer during Mg starvation, anti‑RssB factor/DUF1398 family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,212,535	0	A	G	100.0%	588.2 / NA	161	intergenic (‑532/+168)	iraM/ycgX	RpoS stabilzer during Mg starvation, anti‑RssB factor/DUF1398 family protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (87/74); total (87/74)

Only 100 of 161 total aligned reads displayed.

CCAAAATACATGTGCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAAGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGT  >  NC_000913/1212438‑1212630

ccAAAATACATGTGCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGt                                                                                               >  2:2446763/1‑100 (MQ=255)

ccAAAATACATGTGCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGt                                                                                               <  2:2072044/100‑1 (MQ=255)

 cAAAATACATGTGCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTg                                                                                              <  2:974855/100‑1 (MQ=255)

 cAAAATACATGTGCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTg                                                                                              >  2:2748599/1‑100 (MQ=255)

 cAAAATACATGTGCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTg                                                                                              >  1:1120740/1‑100 (MQ=255)

    aaTACATGTGCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATc                                                                                           <  2:1872609/100‑1 (MQ=255)

    aaTACATGTGCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATc                                                                                           <  1:2794674/100‑1 (MQ=255)

     aTACATGTGCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATca                                                                                          <  2:1855782/100‑1 (MQ=255)

      tACATGTGCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATcac                                                                                         <  2:2278198/100‑1 (MQ=255)

           gtgCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTc                                                                                    <  1:1683555/100‑1 (MQ=255)

           gtgCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTc                                                                                    <  2:1709364/100‑1 (MQ=255)

            tgCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCa                                                                                   >  2:465521/1‑100 (MQ=255)

             gCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCaa                                                                                  >  2:2820722/1‑100 (MQ=255)

               gTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAat                                                                                >  2:2403412/1‑100 (MQ=255)

               gTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAat                                                                                >  1:877869/1‑100 (MQ=255)

               gTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAat                                                                                >  2:2672242/1‑100 (MQ=255)

                 tAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAatat                                                                              >  1:2369792/1‑100 (MQ=255)

                  aaGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATc                                                                             <  2:1975867/100‑1 (MQ=255)

                    gTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCaa                                                                           >  2:1471619/1‑100 (MQ=255)

                    gTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCaa                                                                           >  2:2962669/1‑100 (MQ=255)

                     tATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAg                                                                          >  2:291369/1‑100 (MQ=255)

                     tATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAg                                                                          >  1:1259117/1‑100 (MQ=255)

                      aTTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAatatagatc                                                                         >  1:1918894/1‑95 (MQ=255)

                      aTTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGt                                                                         <  1:2962681/100‑1 (MQ=255)

                      aTTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGAATCAAAAGTCAGGTGATCACATTTCAAATATCAAGt                                                                         >  1:2385967/1‑100 (MQ=255)

                       ttGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGtt                                                                        <  1:2820732/100‑1 (MQ=255)

                        tGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTg                                                                       <  2:745993/100‑1 (MQ=255)

                        tGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTg                                                                       <  1:716106/100‑1 (MQ=255)

                        tGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTg                                                                       <  1:2873882/100‑1 (MQ=255)

                         gAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGa                                                                      >  2:1087918/1‑100 (MQ=255)

                         gAAACGAACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAACTAACGTATAAAAAATCAGGTTATCACATTTCAAATATCAAGt                                                                         >  2:1193441/1‑97 (MQ=255)

                          aaaCGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGAt                                                                     <  1:1496990/100‑1 (MQ=255)

                          aaaCGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGAt                                                                     >  2:1155892/1‑100 (MQ=255)

                          aaaCGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGAt                                                                     >  2:1701151/1‑100 (MQ=255)

                          aaaCGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGAt                                                                     <  1:1471622/100‑1 (MQ=255)

                            aCGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAg                                                                   <  1:1841977/100‑1 (MQ=255)

                               gACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTAt                                                                >  2:500581/1‑100 (MQ=255)

                               gACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTAt                                                                <  2:211911/100‑1 (MQ=255)

                                aCGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTAtt                                                               <  1:1211096/100‑1 (MQ=255)

                                aCGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTAtt                                                               <  1:1087920/100‑1 (MQ=255)

                                aCGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAATCAGGTGATCACATTTCAAATATCAAGTGGGTattatt                                                               <  2:3179348/100‑1 (MQ=255)

                                  gtgtGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAg                                                             <  2:1841364/100‑1 (MQ=255)

                                   tgtgGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGt                                                            >  1:3403880/1‑100 (MQ=255)

                                    gtgGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTc                                                           >  1:560967/1‑100 (MQ=255)

                                    gtgGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTc                                                           >  1:2966295/1‑100 (MQ=255)

                                    gtgGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTc                                                           >  1:2187168/1‑100 (MQ=255)

                                        cACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGt                                                       <  1:314608/100‑1 (MQ=255)

                                         aCGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTg                                                      >  1:2760858/1‑100 (MQ=255)

                                         aCGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTg                                                      <  2:14845/100‑1 (MQ=255)

                                          cGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGa                                                     <  1:1034953/100‑1 (MQ=255)

                                           ggCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGAGAGTATTAGTCTGGTg                                                      <  2:31065/98‑1 (MQ=255)

                                             ccGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGatta                                                  <  1:512667/100‑1 (MQ=255)

                                                 tgttTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGAttattta                                              <  2:1837171/100‑1 (MQ=255)

                                                  gttTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGAttatttat                                             >  1:2094261/1‑100 (MQ=255)

                                                  gttTTTATAAATATGTTAACCGTTATAAAATAACGTATC‑AAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATg                                            <  1:3058209/100‑1 (MQ=255)

                                                   tttttATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATg                                            <  2:2187162/100‑1 (MQ=255)

                                                   tttttATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATg                                            <  2:537387/100‑1 (MQ=255)

                                                    ttttATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATgg                                           <  1:2428991/100‑1 (MQ=255)

                                                     tttATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATggn                                          <  2:1496474/100‑2 (MQ=255)

                                                      ttATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGt                                         >  2:105007/1‑100 (MQ=255)

                                                         taAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGAc                                      >  2:135947/1‑100 (MQ=255)

                                                         taAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGAc                                      <  1:1501168/100‑1 (MQ=255)

                                                           aaTATGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACaa                                    >  2:1031662/1‑100 (MQ=255)

                                                               tGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATaaa                                <  1:2583451/100‑1 (MQ=255)

                                                               tGTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATaaa                                >  2:3344237/1‑100 (MQ=255)

                                                                gTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATaaaa                               >  1:594811/1‑100 (MQ=255)

                                                                gTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATaaaa                               >  1:416166/1‑100 (MQ=255)

                                                                gTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATaaaa                               >  1:925226/1‑100 (MQ=255)

                                                                gTTAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATaaaa                               <  1:105006/100‑1 (MQ=255)

                                                                 ttAACCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATaaaaa                              <  1:291370/100‑1 (MQ=255)

                                                                   aaCCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGa                            >  1:821363/1‑100 (MQ=255)

                                                                    aCCGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAGAAGAc                           >  1:1738959/1‑100 (MQ=255)

                                                                      cGTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAg                         >  2:3371275/1‑100 (MQ=255)

                                                                       gTTATAAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGt                        >  2:891074/1‑100 (MQ=255)

                                                                          ataAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTAtt                     <  2:2596407/100‑1 (MQ=255)

                                                                           taAAATAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTa                    >  2:1024219/1‑100 (MQ=255)

                                                                            aaaaTAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTaa                   >  1:1041964/1‑100 (MQ=255)

                                                                            aaaaTAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTaa                   >  2:3155556/1‑100 (MQ=255)

                                                                            aaaaTAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTaa                   >  1:215453/1‑100 (MQ=255)

                                                                            aaaaTAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTaa                   >  1:2159517/1‑100 (MQ=255)

                                                                            aaaaTAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTaa                   >  2:1092358/1‑100 (MQ=255)

                                                                            aaaaTAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTaa                   >  1:704430/1‑100 (MQ=255)

                                                                                tAACGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAatcat               <  1:1860788/100‑1 (MQ=255)

                                                                                 aaCGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAatcatc              <  1:1215169/100‑1 (MQ=255)

                                                                                 aaCGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAatcatc              >  2:2861037/1‑100 (MQ=255)

                                                                                 aaCGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAatcatc              <  1:426313/100‑1 (MQ=255)

                                                                                  aCGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATcc             >  1:1872415/1‑100 (MQ=255)

                                                                                   cGTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCa            >  2:1446157/1‑100 (MQ=255)

                                                                                    gTATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCAt           >  2:39635/1‑100 (MQ=255)

                                                                                     tATCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATa          >  1:246663/1‑100 (MQ=255)

                                                                                      aTCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATag         >  2:2408009/1‑100 (MQ=255)

                                                                                       tCAAAAGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATaga        <  1:1701153/100‑1 (MQ=255)

                                                                                         aaaaGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATaga        >  2:2244670/1‑98 (MQ=255)

                                                                                         aaaaGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAgaga      >  2:1154063/1‑100 (MQ=255)

                                                                                         aaaaGTCAGGAGATCACATTTCAAATATCCAGTTGAAAGTATCAGCCTGGTGAGTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATagag       >  2:2327964/1‑99 (MQ=255)

                                                                                          aaaGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGAt     >  2:1233520/1‑100 (MQ=255)

                                                                                           aaGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATa    >  2:2255946/1‑100 (MQ=255)

                                                                                           aaGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATa    <  2:844249/100‑1 (MQ=255)

                                                                                            aGTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAg   >  2:630231/1‑100 (MQ=255)

                                                                                             gTCAGGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGt  <  1:1360658/100‑1 (MQ=255)

CCAAAATACATGTGCGTTAAGTATTGAAACGGACGTGTGGCACGGCCGTTGTTTTTATAAATATGTTAACCGTTATAAAATAACGTATCAAAAGTCAAGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGT  >  NC_000913/1212438‑1212630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`