| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,553,210 | A→G | K287E (AAA→GAA) | amiA → | N‑acetylmuramoyl‑l‑alanine amidase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,553,210 | 0 | A | G | 99.2% | 441.0 / NA | 121 | K287E (AAA→GAA) | amiA | N‑acetylmuramoyl‑l‑alanine amidase I |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (62/58); minor base C (0/1); total (62/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 122 total aligned reads displayed.
TAGGCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGAT > NC_000913/2553115‑2553305 | tAGGCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGgaaaa > 1:1814543/1‑100 (MQ=255) aGGCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAg < 2:1322122/100‑1 (MQ=255) ggCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGc < 2:1995576/100‑1 (MQ=255) cACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGa < 2:2541648/100‑1 (MQ=255) cACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGa > 1:3125785/1‑100 (MQ=255) cggcgTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGt < 2:2668388/100‑1 (MQ=255) gcgTGTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTa < 2:1440332/100‑1 (MQ=255) cgTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGCGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGACAAGTTAt > 2:286847/1‑100 (MQ=255) ttccgatctgAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATg < 2:1188974/91‑1 (MQ=255) gTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATg < 1:2503655/100‑1 (MQ=255) gTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATg < 2:1703284/100‑1 (MQ=255) gTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATg < 1:780307/100‑1 (MQ=255) gTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAAcc < 1:3034385/100‑1 (MQ=255) gTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAAcc > 1:2793040/1‑100 (MQ=255) gTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGAAAACAAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAAcc > 1:1986691/1‑100 (MQ=255) gTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTACACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAAcc > 2:1894615/1‑100 (MQ=255) aGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGa > 2:1660454/1‑100 (MQ=255) gAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGagatcggaa > 1:1188977/1‑92 (MQ=255) aaaaTCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACg < 2:104293/100‑1 (MQ=255) aaaaTCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACg < 2:3075794/100‑1 (MQ=255) aaaaTCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACg > 2:2485526/1‑100 (MQ=255) aaaaTCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACg < 1:1599884/100‑1 (MQ=255) aTCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGcac < 1:694415/100‑1 (MQ=255) tCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGcaca < 2:2707371/100‑1 (MQ=255) gCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACAcc > 1:1526643/1‑100 (MQ=255) gCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACAcc > 1:3073412/1‑100 (MQ=255) ccACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCa < 1:3099445/100‑1 (MQ=255) cacaGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAACCGCGATAAGTTATGAAACCCGACGCACACCAg > 2:2966720/1‑100 (MQ=255) cacaGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAg > 1:720150/1‑100 (MQ=255) gCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTa > 2:2780281/1‑100 (MQ=255) cGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTaa > 2:1732125/1‑100 (MQ=255) gATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTaaa > 2:1218671/1‑100 (MQ=255) gATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTaaa > 1:1762257/1‑100 (MQ=255) gATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTCCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTaa < 1:1732128/99‑1 (MQ=255) aTTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAAc < 1:1670178/100‑1 (MQ=255) ttGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACa < 1:1113437/100‑1 (MQ=255) gCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGt > 2:2705161/1‑100 (MQ=255) gCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGt > 1:932102/1‑100 (MQ=255) gCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGt > 1:1633715/1‑100 (MQ=255) gCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGt > 1:1550715/1‑100 (MQ=255) gCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGt > 1:1311911/1‑100 (MQ=255) tGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGttt < 2:764895/100‑1 (MQ=255) tGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGttt > 1:1472170/1‑100 (MQ=255) gAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTc > 2:1930036/1‑100 (MQ=255) gAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTc < 1:661606/100‑1 (MQ=255) aGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTg < 1:2764934/100‑1 (MQ=255) ggCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGc < 1:2904886/100‑1 (MQ=255) gatctGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGc < 1:825353/96‑1 (MQ=255) gCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCt < 1:1660456/100‑1 (MQ=255) gCGTGATCAGTTATGTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCt < 1:1842322/100‑1 (MQ=255) cGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTc < 2:932101/100‑1 (MQ=255) gTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCa < 1:78257/100‑1 (MQ=255) gTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCa > 1:2694928/1‑100 (MQ=255) gATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGcagatc > 2:825353/1‑95 (MQ=255) gATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAAc > 2:2986796/1‑100 (MQ=255) gATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAAc > 2:12950/1‑100 (MQ=255) gATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAAc > 1:1672457/1‑100 (MQ=255) aTCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAAcc > 1:2876098/1‑100 (MQ=255) gTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCa > 1:1022852/1‑100 (MQ=255) gTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCa > 2:290230/1‑100 (MQ=255) gTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCa < 1:639054/100‑1 (MQ=255) gTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCa > 2:2518782/1‑100 (MQ=255) gTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCAAACCAGGTTAAACAGTTTCTGCTCAACCtt > 1:299570/1‑98 (MQ=255) ttATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAg < 2:942886/100‑1 (MQ=255) ttATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAg < 1:2012417/100‑1 (MQ=255) tATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAgg < 1:79045/100‑1 (MQ=255) tttCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGAt > 2:2835453/1‑100 (MQ=255) tCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATAc > 2:3329572/1‑100 (MQ=255) tCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATAc < 2:2129742/100‑1 (MQ=255) ccACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACg > 2:2211225/1‑100 (MQ=255) cACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGa > 2:3392230/1‑100 (MQ=255) cTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGAtt > 2:1100823/1‑100 (MQ=255) ggTTCGACAACCAGAAGGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTg > 1:310500/1‑100 (MQ=255) gatctgACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTg < 2:697830/95‑1 (MQ=255) gTTCGATAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGt > 2:532553/1‑100 (MQ=255) gTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGt > 1:2536047/1‑100 (MQ=255) ttCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTc < 1:2518790/100‑1 (MQ=255) ttCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTc < 2:3125773/100‑1 (MQ=255) ttCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTc < 1:3168648/100‑1 (MQ=255) ttCGACAAACAGAAAGCATATTCGGAAAAGAGATAAGTTATGACAACAGAAGAACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGTTACGTTTTGTc < 2:1986687/100‑1 (MQ=255) tCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTca > 2:1246858/1‑100 (MQ=255) gACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCACCCTTCAGGATACGGTTTgagatc > 1:697830/1‑95 (MQ=255) gACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTcagc > 2:1440293/1‑100 (MQ=255) gACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTcagc < 2:1848334/100‑1 (MQ=255) aCAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTcagca < 1:1930040/100‑1 (MQ=255) ctaCCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTcagcag < 2:1279949/98‑1 (MQ=255) cgatctgAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTcagcag < 1:1126628/94‑1 (MQ=255) cAACCAGAACGCCAATACTCAAAGTCGATAAGTGATGAAGCCCTACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTcagca < 2:3074088/99‑1 (MQ=255) aaCCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCagcagc < 2:422786/100‑1 (MQ=255) aCCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTcagcagag > 1:1279952/1‑98 (MQ=255) aCCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCt > 1:1703381/1‑100 (MQ=255) cAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCagcagccga > 2:2311357/1‑97 (MQ=255) gAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTcagcagagatcg > 2:1126626/1‑94 (MQ=255) aGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGAccgcc > 1:2564613/1‑100 (MQ=255) gCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGAccgccg < 2:1022851/100‑1 (MQ=255) caTTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCg > 1:2714508/1‑100 (MQ=255) caTTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCg > 1:295944/1‑100 (MQ=255) caTTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCg > 1:229203/1‑100 (MQ=255) ttCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGAt < 2:1672455/100‑1 (MQ=255) ttCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGAt < 2:1472167/100‑1 (MQ=255) | TAGGCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGAT > NC_000913/2553115‑2553305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |