| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 175,145 | Δ1 bp | 15.4% | coding (39/1422 nt) | clcA → | H(+)/Cl(‑) exchange transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 175,144 | 0 | C | . | 15.4% | 356.6 / 62.6 | 123 | coding (38/1422 nt) | clcA | H(+)/Cl(‑) exchange transporter |
| Reads supporting (aligned to +/- strand): ref base C (47/55); new base . (11/8); total (60/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.25e-01 | |||||||||||
Only 100 of 126 total aligned reads displayed.
TTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTG > NC_000913/175045‑175242 | ttCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGc < 1:1231766/100‑1 (MQ=255)ttCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGc > 1:2416693/1‑100 (MQ=255) cATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCcg < 1:2028878/100‑1 (MQ=255) tGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCcgcg < 2:226582/100‑1 (MQ=255) tGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCcgcg > 2:351118/1‑100 (MQ=255) aCGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑Gcc < 2:1431878/100‑1 (MQ=255) gTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTg > 2:2139155/1‑100 (MQ=255) gTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTg < 1:2045021/100‑1 (MQ=255) tGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGc < 1:2555246/100‑1 (MQ=255) cGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCgn < 1:2572547/100‑2 (MQ=255) cGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCgg < 1:1850121/100‑2 (MQ=255) gAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCggt < 2:1771309/100‑3 (MQ=255) gAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCggt < 1:80100/100‑3 (MQ=255) atgaaaaTGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCggtg < 1:2533183/97‑4 (MQ=255) aGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACg < 1:378522/100‑1 (MQ=255) aGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCggtg < 2:1693259/100‑4 (MQ=255) gTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCggtgt < 1:2139028/100‑5 (MQ=255) tAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCa < 2:321013/100‑1 (MQ=255) aaaTGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGa > 1:805405/1‑100 (MQ=255) aaTGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGG‑CGCGCGGCCTGCggtgtttct < 2:1437282/100‑9 (MQ=38) gCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAAc < 2:709637/100‑1 (MQ=255) ccGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACt > 2:2287270/1‑100 (MQ=255) ccGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACt < 1:2583093/100‑1 (MQ=255) ccGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACt > 2:595553/1‑100 (MQ=255) cGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAAc > 1:2215408/1‑98 (MQ=255) tCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGAt < 1:2443294/100‑1 (MQ=255) tCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCg > 2:349270/1‑100 (MQ=255) tCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCg < 2:878016/100‑1 (MQ=255) tCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCg > 2:115832/1‑100 (MQ=255) tCTTATTTGTATGACCAATAAGTGATCATTGGATCAAAACTGATACTACCTCTTTAGAAAAACAGCAGGCCGCGC‑AACTGCGACGCAGACAAAAGATTc > 1:1155693/1‑99 (MQ=255) cTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGc > 1:1460390/1‑100 (MQ=255) cTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGc > 2:178873/1‑100 (MQ=255) cTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGc < 1:74356/100‑1 (MQ=255) ttATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGcc < 1:960568/100‑1 (MQ=255) tATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCa > 1:953165/1‑100 (MQ=255) tATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGACGCGC‑GCCTGCGACGCAGACAACTGATTCGCCa > 1:598214/1‑100 (MQ=255) tttGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAAc < 2:801899/100‑1 (MQ=255) tGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAActt < 2:2434592/100‑1 (MQ=255) tATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAActtct < 1:2545013/100‑1 (MQ=255) aTGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATCCGCCAActtc > 1:849806/1‑98 (MQ=255) tGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTg > 1:1001043/1‑100 (MQ=255) tGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTg > 1:2022361/1‑100 (MQ=255) aCCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGACAACTTCTTGAg < 2:1703552/100‑1 (MQ=255) ccAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAgc < 2:2308784/100‑1 (MQ=255) ccAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAgc > 2:2223082/1‑100 (MQ=255) ccAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAg < 1:1032425/99‑1 (MQ=255) cAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAgcg < 2:214973/100‑1 (MQ=255) aaTAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAgcgc > 1:1523812/1‑100 (MQ=255) aaTAAGTGATCATTGGATGAAAACTGATACTCCCTCTTAAAAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTgcgcgc > 1:1594233/1‑100 (MQ=255) aTAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGcgcg < 1:2369672/100‑1 (MQ=255) aTAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGcgcg > 1:1549251/1‑100 (MQ=255) aTAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGcgcg < 2:1549260/100‑1 (MQ=255) aaGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCNTGAGCGCGAt < 2:874762/100‑1 (MQ=255) aGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATa > 1:2009027/1‑100 (MQ=255) aTCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAAc < 2:677029/100‑1 (MQ=255) aTCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAAc < 2:2011789/100‑1 (MQ=255) aTTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTTGCCAACTTCTCGAGAGCGATAAAAcccc > 2:2202931/1‑100 (MQ=255) ggATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGtt < 1:2214579/100‑1 (MQ=255) gATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTa > 2:1316845/1‑100 (MQ=255) aTGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAg < 1:1286315/100‑1 (MQ=255) aTGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAg > 1:1147797/1‑100 (MQ=255) tGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGc < 1:184207/100‑1 (MQ=255) tGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTg < 2:1869101/100‑1 (MQ=255) tGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTg < 2:1966840/100‑1 (MQ=255) tACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGttt < 2:2158679/100‑1 (MQ=255) tACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGttt < 1:810350/100‑1 (MQ=255) aCTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCCACTTCTTGAGCGCGATAAAACACCGTTAGCCATTTTGt > 1:2227617/1‑97 (MQ=255) cTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTAt > 2:1569848/1‑100 (MQ=255) tCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATg < 2:726048/100‑1 (MQ=255) ccTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggc > 2:525735/1‑100 (MQ=255) ccTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggc < 1:1461461/100‑1 (MQ=255) ctctTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcg > 2:1488927/1‑100 (MQ=255) ctctTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcg < 2:1386334/100‑1 (MQ=255) ctctTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATggcg > 2:1290241/1‑100 (MQ=255) tttAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCa > 1:1222368/1‑100 (MQ=255) ttAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAg < 1:2311283/100‑1 (MQ=255) gAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcg > 2:2371587/1‑100 (MQ=255) gAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcg > 2:386276/1‑100 (MQ=255) gAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcg > 2:552989/1‑100 (MQ=255) gAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcg < 2:1143713/100‑1 (MQ=255) gAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcg > 2:2290565/1‑100 (MQ=255) gAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcg > 1:479392/1‑100 (MQ=255) gAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcg > 2:1414807/1‑100 (MQ=255) ctgcgtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcgt > 2:920330/7‑100 (MQ=255) tgcgtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGCTTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGGAgtcgtc > 1:1388968/6‑100 (MQ=255) tgcgtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcgtc > 1:1343506/6‑100 (MQ=255) aaCACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAgtcgtc > 2:1991259/1‑100 (MQ=255) gcgtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGtcgtcg > 2:324392/5‑100 (MQ=255) acacCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGtcgtcg > 2:2319122/1‑100 (MQ=255) cgtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCgg > 1:1882730/4‑100 (MQ=255) cacCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCgg > 2:1119411/1‑100 (MQ=255) gtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGCTTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGc > 1:1778305/3‑100 (MQ=255) gtcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGc > 2:2202157/3‑100 (MQ=255) gtcGCAGG‑CGCGCGGCCTGAGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGc > 1:1566703/3‑100 (MQ=255) acCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGc < 2:2353946/100‑1 (MQ=255) tcGCAGG‑CGCGCGGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCa > 2:1895951/2‑100 (MQ=255) ccGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCa > 2:147074/1‑100 (MQ=255) cGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCAc < 1:223202/100‑1 (MQ=255) ggCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTAGTCGGCACGCt < 1:1677833/99‑1 (MQ=255) gCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCttg > 1:619898/1‑100 (MQ=255) | TTCATGGAACGTGCGAGTAAAATGCCGTCATCTTATTTGTATGACCAATAAGTGATCATTGGATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGC‑GCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTG > NC_000913/175045‑175242 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |