Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,734,543 (C)8→7 100% coding (492/732 nt) yfiH ← UPF0124 family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,734,5360C.81.8% 282.7 / 72.1 99coding (499/732 nt)yfiHUPF0124 family protein
Reads supporting (aligned to +/- strand):  ref base C (11/6);  new base . (42/39);  total (54/45)
Fisher's exact test for biased strand distribution p-value = 4.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01

Only 100 of 106 total aligned reads displayed.

GCCGGGCAAGCTGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAACCGTCTCTTCC  >  NC_000913/2734437‑2734630
                                                                                                    |                                                                                              
gCCGGGCAAGCTGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTc                                                                                                >  1:1338658/1‑100 (MQ=255)
   gggCAAGCTGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGTACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTcccc                                                                                             <  1:496167/100‑1 (MQ=255)
   gggCAAGCTGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTcccc                                                                                             <  2:400434/100‑1 (MQ=255)
    ggCAAGCTGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTccccc                                                                                            >  2:881567/1‑100 (MQ=255)
       aaGCTGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTccccccca                                                                                         <  2:2111341/100‑2 (MQ=255)
        aGCTGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTcccccccac                                                                                        >  2:333507/1‑98 (MQ=255)
        aGCTGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTcccccccac                                                                                        <  1:126178/100‑3 (MQ=255)
           tGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCCACtt                                                                                     >  2:2113578/1‑100 (MQ=255)
           tGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTCCACTTGCTTTACCGTCGACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTc                                                                                    <  2:1810713/100‑1 (MQ=255)
            gATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTc                                                                                    <  1:654739/99‑1 (MQ=255)
              tAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGaa                                                                                 >  2:1069544/1‑100 (MQ=255)
              tAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGaa                                                                                 >  2:664429/1‑100 (MQ=255)
               aaaTATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAAc                                                                                <  1:1845524/100‑1 (MQ=255)
                aaTATCCGCCAAATACTTATCACCAAGCTGAATGAAAGCTGCACTTGCTTTCGCGTCTACTGCCATAAACGCCTCGCGAACCTCCACCCCCCCTTCg                                                                                   >  1:1278043/1‑97 (MQ=255)
                  tatCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAAcgcg                                                                             <  1:31658/100‑1 (MQ=255)
                   atCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCCACTTCGAAcgcg                                                                             >  2:1444676/1‑100 (MQ=255)
                    tCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAAcgcgcg                                                                           <  1:1435523/100‑1 (MQ=255)
                     ccGCCAGATCCTTATCACCATGCTGAATGAACGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAAc                                                                                >  1:1760906/1‑94 (MQ=255)
                     ccGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGt                                                                          >  2:2239811/1‑100 (MQ=255)
                       gCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCCACTTCGAACGCGCGTg                                                                         <  1:1075868/100‑1 (MQ=255)
                       gCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTg                                                                         >  1:880121/1‑99 (MQ=255)
                          aGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGAcc                                                                     <  2:637375/100‑1 (MQ=255)
                           atctcTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCa                                                                    <  2:671207/96‑1 (MQ=255)
                             tACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCCACTTCGAACGCGCGTGGACCaa                                                                   >  2:165576/1‑100 (MQ=255)
                              aCTTATCACCATTCTGAATGAAAGCTTCACTTGCTTTAGCGTCTACTGCCATAACCGCCTCGCGAACCTCCCCCCCACGTCGAACGCGCGTGGACCAAtt                                                                 <  1:2438431/100‑1 (MQ=255)
                               cTTATCACCATGCTGAATGAAAGCTGCGCTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCTCACTTCGAACGCGCGTGGACCAATTg                                                                <  2:1580105/100‑1 (MQ=255)
                               cTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGCCCAAtt                                                                 >  1:2149460/1‑99 (MQ=255)
                               cTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCaagat                                                                >  1:671204/1‑97 (MQ=255)
                               cTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTg                                                                >  1:2244844/1‑100 (MQ=255)
                                 tATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGcc                                                              >  2:2343495/1‑100 (MQ=255)
                                 tATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGc                                                               >  1:983658/1‑99 (MQ=255)
                                  aTCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCg                                                             <  1:1208879/100‑1 (MQ=255)
                                  aTCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCg                                                             <  2:2120566/100‑1 (MQ=255)
                                  aTCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCg                                                             <  1:1208861/100‑1 (MQ=255)
                                    cACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCgg                                                            <  1:980896/100‑1 (MQ=255)
                                    cACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGc                                                           <  2:2475869/100‑1 (MQ=255)
                                    cACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAAACTCCCCCACACTTCGAACGCGCGTGGACCAATTGCCgg                                                            >  2:109954/1‑99 (MQ=255)
                                    cACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCGCGCGAACCTCCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCgg                                                            <  2:1880385/100‑1 (MQ=255)
                                      ccATGCTGAATGAAAGCTGCACTTGCTTTAGCGGCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGccc                                                         <  1:1392973/100‑1 (MQ=255)
                                       cATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGccc                                                         <  2:2370511/100‑1 (MQ=255)
                                        aTGCTGAATGAAAGCGGCCCTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCCACTTCGAACGCGCGTGGACCAGTTGCCGGcn                                                          <  1:332255/98‑2 (MQ=255)
                                          tcTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTaa                                                      <  1:2462021/99‑1 (MQ=255)
                                          gCTGAATGAACGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAAc                                                     <  1:1701414/100‑1 (MQ=255)
                                           cTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAAcc                                                    >  1:2445121/1‑100 (MQ=255)
                                           cTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAAcc                                                    >  1:1330276/1‑100 (MQ=255)
                                           cTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAAcc                                                    >  2:584330/1‑100 (MQ=255)
                                           cTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCCAACGCGCGTGGACCAATTGCCGGCCCTAAcc                                                    >  1:2087576/1‑100 (MQ=255)
                                           cTGAATGAAAGCTGCACTTGCTTTAGCGTCTAATGCCATAAACGCCTCGCGAACCTCCCCCCCCACTGCGAACGCGCGTGGACCAATTTCCGGCCCTaa                                                      >  2:2462038/1‑99 (MQ=255)
                                            tgaatgaaAGCTCCACTTGCTTTAACGTCTACTGCCATAAACGCATCGCGAACCTCCTCCCCACGTCGAACTCCCGTGCACCAATTCCCGGCCCTAAcc                                                    >  1:672401/1‑99 (MQ=255)
                                             gaatgaaAGCTGCACTTGCTTTAGCGTTTACTGCCATAAACGCCTCGCGAACCTCCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCa                                                   >  2:284405/1‑100 (MQ=255)
                                             gaatgaaAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAg                                                  <  2:2502521/100‑1 (MQ=255)
                                              aatgaaAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAgg                                                 >  1:145740/1‑100 (MQ=255)
                                                tgaaAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCg                                               >  2:1674210/1‑100 (MQ=255)
                                                 gaaAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCg                                               >  2:2387309/1‑100 (MQ=255)
                                                  aaaGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCgag                                             <  2:628246/100‑1 (MQ=255)
                                                   aaGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCgaga                                            >  2:2272391/1‑100 (MQ=255)
                                                   aaGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCgaga                                            >  2:2307153/1‑100 (MQ=255)
                                                    aGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGaa                                           <  2:688000/100‑1 (MQ=255)
                                                       tGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAatat                                        >  1:2053321/1‑100 (MQ=255)
                                                         cACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATAttt                                      >  1:1874124/1‑100 (MQ=255)
                                                         cACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATAttt                                      >  1:107350/1‑100 (MQ=255)
                                                            ttGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTcc                                   <  1:1046768/100‑1 (MQ=255)
                                                             tGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCg                                  <  2:471987/100‑1 (MQ=255)
                                                               cTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGa                                <  2:2523452/100‑1 (MQ=255)
                                                               cTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGa                                <  1:463977/100‑1 (MQ=255)
                                                               cTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGa                                >  2:1605181/1‑100 (MQ=255)
                                                                tttAGCGTCTACTGCCATAAACGCCTCGCGAATTTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGAt                               <  1:929831/100‑1 (MQ=255)
                                                                   aGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTAt                            >  2:2057953/1‑100 (MQ=255)
                                                                   aGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTAt                            >  1:432369/1‑100 (MQ=255)
                                                                    gCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATc                           >  2:567287/1‑100 (MQ=255)
                                                                     cGTCTACTGCCATAAACGCCTCGCGACCCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCa                          <  1:548775/100‑1 (MQ=255)
                                                                     cGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCa                          <  2:1676853/100‑1 (MQ=255)
                                                                        cTACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCa                       >  2:922985/1‑100 (MQ=255)
                                                                        cTACTGCCATAAACGCCTAGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAAACAGGCGAGAATATTTTCCGGATTATCAGCa                       >  1:1262103/1‑100 (MQ=255)
                                                                         tACTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCaa                      >  1:459791/1‑100 (MQ=255)
                                                                         tACTGACACACACGCGTCGCCAACCTCCCCCCCACTTCGAACGCGCGTAGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCa                       <  1:1118091/99‑1 (MQ=255)
                                                                          aCTGCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAGCGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCaaa                     <  1:1498518/100‑1 (MQ=255)
                                                                             gCCATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACa                  <  1:2358702/100‑1 (MQ=255)
                                                                              ccATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAg                 <  1:2503988/100‑1 (MQ=255)
                                                                              ccATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAg                 >  2:1063296/1‑100 (MQ=255)
                                                                              ccATAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAg                 <  1:1063292/100‑1 (MQ=255)
                                                                                aTAAACGCCTCGCGAACCTCCCCCCCACTTCGAACGCCCGTGGACCAATCGCCGCCCCTACCCCGGCGCGAATACTTTCCGGCTTATCAGCAacac                   >  1:2285758/1‑96 (MQ=255)
                                                                                 tAAACGCCTCGCGAGCCGCCCCCCCACTTCGAACTCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGaa              >  1:1777406/1‑100 (MQ=255)
                                                                                  aaaCGCCTCGCGAACCTCCCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGa               >  1:1283273/1‑100 (MQ=255)
                                                                                  aaaCGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGaaa             <  1:1726060/100‑1 (MQ=255)
                                                                                   aaCGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGACCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAAc            >  2:2379340/1‑100 (MQ=255)
                                                                                     cGCCTCGCGAACCTCCCCCCCCCCTTCGAACGCGCGTGGACCAACTGCCGGCCCTAACCAGGCGAGAATAATTTCCGGATTATCCGCAAAACAGGaaaac           >  1:1119442/1‑98 (MQ=255)
                                                                                     cGCCTCGCGAACCTCCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAAcc           >  2:254332/1‑100 (MQ=255)
                                                                                     cGCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAACCg          >  2:648191/1‑100 (MQ=255)
                                                                                      gCCTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAACCg          >  1:1001951/1‑99 (MQ=255)
                                                                                       ccTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAACCGtc        <  2:880124/100‑1 (MQ=255)
                                                                                       ccTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAACCGtc        >  1:2176449/1‑100 (MQ=255)
                                                                                        cTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAAc            >  1:2540576/1‑95 (MQ=255)
                                                                                        cTCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAACCGtct       >  2:1469655/1‑100 (MQ=255)
                                                                                         tCGCGAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAACCGtctc      <  2:454435/100‑1 (MQ=255)
                                                                                          cgcgAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAAc            >  1:895966/1‑93 (MQ=255)
                                                                                          cgcgAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAACCGTctct     <  1:2343481/100‑1 (MQ=255)
                                                                                          cgcgAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAACCGTctct     <  2:2049396/100‑1 (MQ=255)
                                                                                             gAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAACCGTCTCTTcc  <  1:109953/100‑1 (MQ=255)
                                                                                             gAACCTCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAACCGTCTCTTcc  <  1:389547/100‑1 (MQ=255)
                                                                                                    |                                                                                              
GCCGGGCAAGCTGATAAATATCCGCCAGATACTTATCACCATGCTGAATGAAAGCTGCACTTGCTTTAGCGTCTACTGCCATAAACGCCTCGCGAACCTCCCCCCCCACTTCGAACGCGCGTGGACCAATTGCCGGCCCTAACCAGGCGAGAATATTTTCCGGATTATCAGCAAAACAGGAAACCGTCTCTTCC  >  NC_000913/2734437‑2734630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: