| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,100,447 | (T)6→5 | 100% | coding (79/1035 nt) | rhaT ← | L‑rhamnose:proton symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,100,442 | 0 | T | . | 71.7% | 178.9 / 131.7 | 106 | coding (84/1035 nt) | rhaT | L‑rhamnose:proton symporter |
| Reads supporting (aligned to +/- strand): ref base T (14/15); new base . (37/39); total (52/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 116 total aligned reads displayed.
AAATTCGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATCCTCA > NC_000913/4100344‑4100538 | aaaTTCGGTAGTAACAGGGCGCTGATGTCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACtt < 1:1671848/100‑1 (MQ=255) tCGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACtttttt < 2:925210/100‑1 (MQ=255) tCGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACtttttg < 2:2279136/100‑2 (MQ=255) cGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTg < 2:133609/100‑1 (MQ=255) ggTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACtttttgaa > 2:1066393/1‑97 (MQ=255) ggTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAACCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACtttttga < 1:2047219/99‑3 (MQ=255) gtagtaACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACtttttgaac > 1:1958123/1‑96 (MQ=255) atagtcACAGGCCGCCGATAGCCCACGGCAGAATAATCCCCGAAACAATCCCACCGACTGACTACATGTTTTACCATGACCATTTTTTTTCttttt > 1:266447/2‑96 (MQ=255) tagtaACAGGGCGCTGATGGCCGACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTGTTTGGacg < 1:2205459/100‑3 (MQ=255) tagtaACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACttttttaacg > 1:1069387/1‑96 (MQ=255) agtaACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACgg > 1:1021058/1‑100 (MQ=255) gtaACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACtttttt > 1:1136578/1‑94 (MQ=255) taACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAg > 2:1103712/1‑100 (MQ=255) aaCAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAATTTTTTGAACGGa > 1:1275473/1‑99 (MQ=255) aCAGGGCGCTGATGGCCGACGGCAGAATAATCCACGTAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGc < 1:253261/100‑1 (MQ=255) aCAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATtttttttttttttttac > 1:693434/1‑91 (MQ=255) aGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTa > 2:25129/1‑100 (MQ=255) gggCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTaa < 2:707082/100‑1 (MQ=255) gggCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTaa > 2:1430531/1‑100 (MQ=255) ggCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTaa < 2:2066739/100‑1 (MQ=255) ggCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTaaa > 2:1684610/1‑100 (MQ=255) gcgcTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTaaaa > 2:2525172/1‑100 (MQ=255) cgcTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTaaaaa > 1:1746703/1‑100 (MQ=255) cTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACa < 1:2539584/100‑1 (MQ=255) cTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACa < 2:832307/100‑1 (MQ=255) cTGATAGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGGCCGTAAAAACa > 1:526073/1‑100 (MQ=255) gATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAgg > 2:138764/1‑100 (MQ=255) aTGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGc < 1:2132088/100‑1 (MQ=255) ggCCCACGGCAGAATAATCCACGGAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTg < 1:437524/100‑1 (MQ=255) ggCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTg < 2:462712/100‑1 (MQ=255) ggCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTg < 2:1529712/100‑1 (MQ=255) cccACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTAAACGGAGCGTAAAAACAGGCTGCa > 1:682587/1‑100 (MQ=255) cccACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGCTTCCCATGACCATTTTTATACATTTTTGAACGGAGCGTAAAAACAgac > 2:832121/1‑95 (MQ=255) ccACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCAc < 2:1775907/100‑1 (MQ=255) cACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACt > 2:1659496/1‑100 (MQ=255) ggCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGc < 2:841381/100‑1 (MQ=255) ggCAGAATAAGCCACGAAACAAGCATACCGACTGACCACATGGTTTCACATGACCAAGTTTTTAC‑TTTTTGAACGGAGAGTACAAACAGGCTGCACTg < 1:2551713/98‑1 (MQ=255) aGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCcgc < 1:982104/100‑1 (MQ=255) gAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCcgcg > 1:1579257/1‑100 (MQ=255) aataatCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCgcgc < 1:549714/100‑1 (MQ=255) ataatCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCcgcg < 1:1982287/98‑1 (MQ=255) taatCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGcc < 2:1274308/100‑1 (MQ=255) taatCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGcc < 1:1769697/100‑1 (MQ=255) taatCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGcc < 1:1481528/99‑1 (MQ=255) atCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGa < 1:1940546/100‑1 (MQ=255) atCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGa > 2:1403241/1‑100 (MQ=255) atCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGAt > 2:65370/1‑100 (MQ=255) tCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGAt < 2:1993797/100‑1 (MQ=255) tCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATc < 2:2456005/100‑1 (MQ=255) tCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATc < 2:937315/100‑1 (MQ=255) ccACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATc < 2:2427565/100‑1 (MQ=255) cACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCaa > 1:1031972/1‑100 (MQ=255) cttccgatctCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCaaa < 2:1775979/91‑1 (MQ=255) aagcaaCAAGACCACCGACTGGCCACATGGTTTCCCATGAACATTTTTTGACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCAATCa < 1:312423/95‑1 (MQ=255) cGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAAt > 2:1995350/1‑100 (MQ=255) cGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAAt > 1:60289/1‑100 (MQ=255) gAAACATTCCCCGCTAGTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCTTAAAAACAGGCTGCACTGGCCGCGCCGATCa < 1:2525409/96‑1 (MQ=255) aaaCAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGc < 2:1081318/100‑1 (MQ=255) aaaCAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGc < 2:664099/100‑1 (MQ=255) aTCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCaaan < 2:743692/100‑2 (MQ=255) aTCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCaaaa > 2:1767689/1‑100 (MQ=255) aTCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCaaaa > 2:269926/1‑100 (MQ=255) cccACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCaaaagatcggaag > 1:1775970/1‑90 (MQ=255) aCCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATcc < 1:552702/100‑1 (MQ=255) ccGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATccc < 2:2292869/100‑1 (MQ=255) cGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATcccc > 1:1918701/1‑100 (MQ=255) cGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATcccc < 2:286869/100‑1 (MQ=255) gACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCa < 2:1149399/100‑1 (MQ=255) gACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCa > 2:71691/1‑100 (MQ=255) aCTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCa < 2:1559063/100‑1 (MQ=255) aCTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCAt < 2:1048347/100‑1 (MQ=255) gACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCg > 1:1533938/1‑100 (MQ=255) gACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGt > 1:999076/1‑100 (MQ=255) gACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGt > 2:1318920/1‑100 (MQ=255) ccACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTa > 2:2547774/1‑100 (MQ=255) ccACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTaa < 1:612627/100‑1 (MQ=255) ccACATGGTTTCCCATGACCATTTTTTT‑TTTTTTTTTACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTaa > 1:2169429/1‑100 (MQ=255) cacaTGGTTTCCCATGACCATTTTTTTACTTTTTTTTTTTTTTCTTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTaa > 1:2055910/1‑100 (MQ=255) acaTGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAATGTAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATc > 1:1918873/1‑100 (MQ=255) caTGGTTTGCCATGACCATTTTTGTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGTTCAAATGCCAAAATATCCCCATCGTaa < 1:929230/98‑1 (MQ=255) tGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCTGCGCCGATCAAATGCCAAAATATCCCCATCGTAATcgcg > 1:2298373/1‑100 (MQ=255) ggTTTCCCATGACCATTTTTTTTTTTTTTT‑TACGGAGCGTAAAAACATGCTGCACTTTCCGCGCCGTTCAAATGCCAAAATATCCCCATCGTact > 1:1113202/1‑93 (MQ=255) ggTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGt > 1:478549/1‑100 (MQ=255) tttCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTa > 1:2511631/1‑100 (MQ=255) ttCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTAc < 2:1648675/100‑1 (MQ=255) cccATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTACTCGCGTTACTc > 1:480946/1‑100 (MQ=255) cATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCAt < 2:1553831/100‑1 (MQ=255) gACCATTTTTTTTTTTTTTTTTTTGGAGCGTAAAAACAGGCTGCACTTGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACtcttct > 1:2146309/1‑100 (MQ=255) gACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCAtctt < 1:174239/100‑1 (MQ=255) gACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCAtctt < 2:486959/100‑1 (MQ=255) aCCATTTTTTT‑TTTTTTTTTACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCAtctt > 1:1479034/1‑99 (MQ=255) ccATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGTACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCAtcttct < 1:1112987/100‑1 (MQ=255) ccATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAGATATCCCCATCGTAATCGCGTTACTCAtcttct < 2:1176002/100‑1 (MQ=255) cATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTAGTCATcttctt > 1:1701701/1‑100 (MQ=255) cATTTTTTT‑TTTTTTTTAACGGAGCGGAAAACCAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATtttctt > 1:1878829/1‑100 (MQ=255) aTTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCAtcttct < 1:2160092/99‑1 (MQ=255) tttttttAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTAt > 2:2091174/1‑100 (MQ=255) tttttAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATcc > 2:1154185/1‑100 (MQ=255) tttttAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATcc > 1:1443401/1‑100 (MQ=255) tACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATCCtca < 1:1340047/100‑1 (MQ=255) | AAATTCGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATCCTCA > NC_000913/4100344‑4100538 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |