| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,809,774:1 | (T)7→8 | 100% | coding (158/738 nt) | ygaZ → | putative L‑valine exporter, norvaline resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,809,767 | 1 | . | T | 97.9% | 313.3 / ‑0.7 | 95 | coding (151/738 nt) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base T (42/51); total (43/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 106 total aligned reads displayed.
GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGA > NC_000913/2809668‑2809860 | ggATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCg < 2:1860667/100‑1 (MQ=255) gCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑ttt > 1:1480964/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑tttt > 1:2058917/1‑100 (MQ=255) aaaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑ttttt < 2:551128/100‑1 (MQ=255) ttgACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑ttttt‑t < 2:1337635/98‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑ttttt‑t < 2:496664/100‑1 (MQ=255) aGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑ttttt‑ta > 1:1337628/1‑99 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑ttttt‑ttc < 2:128168/100‑3 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑ttttt‑ttc < 2:1433399/100‑3 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑ttttt‑ttctcc > 1:233172/1‑95 (MQ=255) gtgtACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCt < 2:2463671/97‑1 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCt > 1:842945/1‑100 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCt > 1:1492413/1‑100 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑ttttt‑ttttttt > 1:284401/1‑94 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTg < 2:567544/100‑1 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTg < 1:509785/100‑1 (MQ=255) tACCGATTGTTATTAGTTATGTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGc > 1:1577996/1‑99 (MQ=255) tACCGATTGGTATGAGTTATAGTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGCCTGGGATTCTCTCCTCTCGCAAGCGT‑T‑TTTTT‑TCTCCTAca > 1:1125839/1‑100 (MQ=255) aCCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGcat > 2:1783130/1‑100 (MQ=255) aCCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGca < 2:1720370/99‑1 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGcatcat > 1:2409357/1‑100 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGcatcat > 2:1800046/1‑100 (MQ=255) aTTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCAtt < 1:1800037/100‑1 (MQ=255) aTTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCAtt < 1:701284/100‑1 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTa < 1:559356/100‑1 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTAt < 2:1054904/100‑1 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTAt > 1:1002855/1‑99 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAgg < 2:607714/100‑1 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAgg > 2:436150/1‑100 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAgg > 1:1825861/1‑100 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAgg < 2:2143451/100‑1 (MQ=255) aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTT‑TCTCCTGCATCATTTATGCAgg > 1:1340257/1‑100 (MQ=255) aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGgc > 2:2470401/1‑100 (MQ=255) aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATAAATGATGCAgga < 2:1209454/100‑2 (MQ=255) aGTCATACTCCGGTGGCCGTTGCGTTCGCTCTCAATGCCACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAgg < 2:1809928/99‑1 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAGTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TATTTTT‑TCTCCTGCATCATTTATGCAGgcg > 1:1557996/1‑100 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGgcg > 2:183262/1‑100 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATAAATGATGCAggag < 2:1946569/100‑3 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATAAATGATGCAggag < 2:708153/100‑3 (MQ=255) atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAg < 1:884/99‑1 (MQ=255) atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGc > 2:514227/1‑100 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGcc < 2:750664/100‑1 (MQ=255) ggTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGtt < 1:1916319/100‑1 (MQ=255) ggTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCACCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGtt > 2:1492216/1‑100 (MQ=255) gtactttctgTTCGGTCGGAATGTGTCCCTTCTGGGATTTTCTTCTCTCGTCGCCGT‑T‑TTTTT‑TCTCCTGCATCATTTTTGCAGGCGCGAGCCAGTTCg < 1:1632249/90‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 2:2206274/1‑100 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 1:2166680/1‑100 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 2:538995/1‑100 (MQ=255) cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt < 2:1293162/100‑1 (MQ=255) ttGCGTTCGGTCTGAATGCGTCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTa < 1:2382062/100‑1 (MQ=255) ttGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCCTTTATGCAGGCGCGAGCCAGTTCGTCATTa > 1:1834000/1‑100 (MQ=255) gCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTAcc > 2:246865/1‑100 (MQ=255) cGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcg > 2:2359691/1‑100 (MQ=255) gTTCGGTCCGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTAcc > 2:2354533/1‑98 (MQ=255) ttCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTTCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgcg > 1:583701/1‑100 (MQ=255) ttCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgcg < 2:1198675/100‑1 (MQ=255) ttCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgcg < 2:1287556/100‑1 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGc < 1:246863/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg > 2:2192555/1‑100 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TTTTTTTTTTCATTTATGCAGGCGCAAGCTATTTCGTCATTACCTCGATGCttg > 1:1242031/1‑97 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 2:2513972/1‑100 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 1:1477642/1‑100 (MQ=255) aaTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCa < 2:447678/100‑1 (MQ=255) aTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 1:823812/97‑1 (MQ=255) aTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAg < 2:2018360/100‑1 (MQ=255) tGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGc > 1:1675401/1‑100 (MQ=255) tGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGc > 2:403059/1‑100 (MQ=255) cGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCTTTCTTCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCTCGATGCTGGCAGCCg > 1:1658797/1‑100 (MQ=255) gACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCgg > 2:787553/1‑100 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 1:939497/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:123902/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 1:1977086/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCgg < 2:181961/99‑1 (MQ=255) cccGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 1:1994595/99‑1 (MQ=255) ccGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGag < 2:1354172/100‑1 (MQ=255) ccGTCTGGGATTCTCGCCTCTCGAAAGCG‑‑T‑TTTTTGTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCgg < 1:1706120/97‑1 (MQ=255) tCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtag < 1:2087352/100‑1 (MQ=255) cTGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtagt > 2:1535523/1‑100 (MQ=255) tGGGATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TTTTTTTTTTCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagttgt > 1:1455035/1‑99 (MQ=255) gggATTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGttt > 2:2355467/1‑100 (MQ=255) aTTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:1500521/100‑1 (MQ=255) aTTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:1475137/100‑1 (MQ=255) aTTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 1:1832797/100‑1 (MQ=255) aTTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 1:45077/100‑1 (MQ=255) aTTCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgcg < 2:2398648/100‑3 (MQ=255) ttCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCTTCATTTATGCAGGCGCGAGCGAGTTCGTCATTACCGCTATGCTGGCAGTCGGGAGTAGTTtgtg < 1:1113318/99‑1 (MQ=255) ttCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 1:1733280/99‑1 (MQ=255) ttCTCTCCTCTCGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 2:1950378/100‑1 (MQ=255) ctctcctctcGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAt < 1:76494/100‑1 (MQ=255) tctcctctcGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAtt < 1:543167/100‑1 (MQ=255) tcctctcGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 1:1898342/100‑1 (MQ=255) tcctctcGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 2:930195/100‑1 (MQ=255) cctctcGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgct < 1:230515/100‑1 (MQ=255) ctctcGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 2:2294457/100‑1 (MQ=255) ctctcGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg > 2:2265636/1‑100 (MQ=255) ctctcGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 2:486402/100‑1 (MQ=255) tctcGAAAGCGT‑T‑TTTTT‑TCGCCTGCATCATTTATCCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc < 2:180742/100‑1 (MQ=255) ctcGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCa > 1:934033/1‑100 (MQ=255) ctcGAAAGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCa > 2:670909/1‑100 (MQ=255) aaaGCGT‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGa > 1:1400217/1‑100 (MQ=255) | GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑T‑TTTTT‑TCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGA > NC_000913/2809668‑2809860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |