| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 270,287:1 | (A)7→8 | 100% | pseudogene (10/258 nt) | insN → | pseudogene, IS911 transposase A;IS, phage, Tn; Transposon‑related functions; extrachromosomal; transposon related |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 270,280 | 1 | . | A | 78.3% | 238.3 / 65.8 | 92 | pseudogene (3/258 nt) | insN | pseudogene, IS911 transposase A;IS, phage, Tn; Transposon‑related functions; extrachromosomal; transposon related |
| Reads supporting (aligned to +/- strand): ref base . (9/11); new base A (39/32); total (48/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 104 total aligned reads displayed.
TCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGCAGCCAGCGCTATGG > NC_000913/270183‑270374 | tcatGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCGTAATG‑a‑a > 1:1391631/1‑100 (MQ=255) catGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑a‑aa > 1:2339859/1‑100 (MQ=255) catGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑a‑aa > 2:2449240/1‑100 (MQ=255) catGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑a‑a < 2:1040494/99‑1 (MQ=255) atGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑a‑aaa > 2:143054/1‑100 (MQ=255) aTCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑a‑aaaaaaa < 2:2109361/100‑2 (MQ=255) aTCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑a‑aaaaaaa < 2:1993158/100‑2 (MQ=255) ccTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑a‑aaaaaaaga > 2:2295115/1‑97 (MQ=255) ccTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑a‑aaaaaaaga > 1:537295/1‑97 (MQ=255) cTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑a‑aaaaaaagaa > 2:420696/1‑96 (MQ=255) cTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑a‑aaaaaaagaa > 2:1680092/1‑96 (MQ=255) ttttCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑a‑aaaaaaagaaa > 2:166143/1‑95 (MQ=255) tttCAGTAGGGATAAAGTGGTTTACTGAAATTGGCCACCTTAACAGAGGTTATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAAtt < 2:1931032/100‑1 (MQ=18) cACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTc > 2:1862516/1‑100 (MQ=255) aCTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCa > 1:2097647/1‑100 (MQ=255) aCTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCa > 1:944619/1‑100 (MQ=255) cTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAg > 2:433511/1‑100 (MQ=255) cTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAg > 2:8574/1‑100 (MQ=255) cTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAgc < 2:2253525/100‑1 (MQ=255) aGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAgcg > 1:10266/1‑99 (MQ=255) gggATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCa > 2:2394627/1‑100 (MQ=255) ggATGTAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCa > 1:1460374/1‑100 (MQ=255) gATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCag < 2:642092/100‑1 (MQ=255) gAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGt < 2:1805401/100‑1 (MQ=255) aGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGttt < 2:2234688/100‑1 (MQ=255) aGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGttt > 2:663407/1‑100 (MQ=255) ggTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTaaa > 1:222287/1‑100 (MQ=255) ggTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTaaa > 2:1803158/1‑100 (MQ=255) gTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAAc > 1:619587/1‑100 (MQ=255) tttACTGAATTTGGCCACCTGAACAGAGGTGCTATACTCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGATTAAAcgc > 1:554807/1‑100 (MQ=255) ttACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAAcgc > 2:1483655/1‑100 (MQ=255) tACTGAATTTGTCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAAcgcg < 1:1032090/100‑1 (MQ=255) aCTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGa < 1:172538/100‑1 (MQ=255) cTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGaa > 2:2325126/1‑100 (MQ=255) cTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAAt > 2:1179496/1‑100 (MQ=255) gAATTTGGCAACCTGAACAGAGGTAATATGGAAACTTCAGAAAAAAACAGTTGTCATAATGTA‑AAAAAAGAAATTTCAGCGTAGAGTTTAAACGCGaagc < 1:1813833/100‑3 (MQ=9) aaTTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACACCACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATcc > 1:2299688/1‑100 (MQ=255) aTTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATcc < 1:1904739/99‑1 (MQ=255) tttGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGc < 2:963793/100‑1 (MQ=255) tttGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTAATAAAGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGc < 1:724264/100‑1 (MQ=14) tGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTc < 2:2328899/100‑1 (MQ=255) tGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTc < 1:287273/99‑1 (MQ=255) ggCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACATGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCa < 2:852414/100‑1 (MQ=255) ggCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCa > 1:917702/1‑100 (MQ=255) ccACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAAc > 1:914312/1‑100 (MQ=255) cACCTGAACAGAGGTGATATGCTCACCTCAGAACAACGCAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAAc < 2:1892409/99‑1 (MQ=255) cACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACt > 2:2433767/1‑100 (MQ=255) cACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTATAAACGCGAATCCGCTCAACt > 2:743129/1‑100 (MQ=255) aCCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTg > 1:2154162/1‑100 (MQ=255) ccTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTgg < 2:1633794/100‑1 (MQ=255) catGAACAGAGGTGATATGCACACCTAAGAAAAACACAGATGTCATAATGAA‑AAAAAAGAAATTTAAACACAGAATTTAAACGCGAATcag > 1:1361267/3‑89 (MQ=9) cTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTc > 2:2767/1‑100 (MQ=255) tGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTc < 1:840697/100‑1 (MQ=255) tGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTc < 2:837828/100‑1 (MQ=255) gAACAGAGGTGATATGCTCAGCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGtag > 1:1576038/1‑98 (MQ=17) gAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAAAGCGAATCCGCTCAACTGGtn < 1:1579793/99‑2 (MQ=255) aCAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTg < 2:10266/100‑1 (MQ=255) aCAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTg < 1:1487511/100‑1 (MQ=255) cAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTg < 1:166142/100‑1 (MQ=255) cAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGa < 1:2234555/100‑1 (MQ=255) nagGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGAc > 2:789129/2‑100 (MQ=255) gagGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGAc > 1:636050/1‑100 (MQ=255) agGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGAcc < 2:2585611/100‑1 (MQ=255) agGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGAcc < 2:930813/100‑1 (MQ=255) ggtgagcatatCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAg > 1:576322/11‑100 (MQ=255) tGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAATTTTCAGCCCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGa > 1:1649314/1‑100 (MQ=17) tGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGa > 2:1918821/1‑100 (MQ=255) tGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGaa > 2:1506002/1‑100 (MQ=255) gATATGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGaa > 1:1582632/1‑100 (MQ=255) atatGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAAc < 2:222289/100‑1 (MQ=255) atatGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAAc < 1:21747/100‑1 (MQ=255) tatGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACt > 2:141247/1‑100 (MQ=255) tatGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACt > 2:1300121/1‑100 (MQ=255) atGCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTa > 2:2255257/1‑100 (MQ=255) ngCTCACCTCAGAACAACACAGGTGCCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGACTCCGCTCAACGGGTCGCTGACCAGAAc > 1:600547/2‑97 (MQ=14) gCTCACCTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTaca > 1:1578797/1‑100 (MQ=255) tCACCTCAGAACAACACAGGTGTCATAATG‑ACAAAAAAGAAATTTCAGCGCGGAGTGTAATCACGAACCCGCTCAACTGGTGGTTGACGAGAACTac > 1:2427061/1‑97 (MQ=17) ccTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTgg < 2:576324/100‑1 (MQ=255) cTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTgg < 1:2451399/100‑1 (MQ=255) cTCAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTg < 1:346591/99‑1 (MQ=255) tCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCa < 2:2101846/100‑1 (MQ=255) cAGAACAACACAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCa < 2:558865/100‑1 (MQ=255) cAGAACAACACAGGTGTCAAAAAGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACAcc < 1:1877311/94‑1 (MQ=17) acaacaCAGGTGTCATTATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGc < 1:1510206/100‑1 (MQ=255) caacaCAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGc < 1:143053/100‑1 (MQ=255) aacaCAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGca < 2:2584410/100‑1 (MQ=255) acacAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGcag < 2:2583528/100‑1 (MQ=255) acacAGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGcag > 2:2304344/1‑100 (MQ=255) cacaGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGcagc > 2:279289/1‑100 (MQ=255) cacaGGTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGcagc < 2:537297/100‑1 (MQ=255) cacaGCTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTTGTTGACCAGAACTACACCGTGGCAGATGcagc > 1:611446/1‑100 (MQ=17) caGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAACCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGcagcc < 1:1262200/98‑1 (MQ=255) ggTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGcagccagc > 1:2388216/1‑100 (MQ=255) ggTGTCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGcagccagc > 2:795007/1‑100 (MQ=255) ggTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGcagccag > 1:1016781/1‑98 (MQ=255) tCATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGCAGCCAGCGCTa > 1:1936723/1‑100 (MQ=255) cATAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGCAGCCAGCGCTAt > 1:208115/1‑100 (MQ=255) cATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGCAGCCAGCGCTATg < 2:1603646/100‑1 (MQ=255) aTAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGCAGCCAGCGCTATg < 2:2154845/100‑1 (MQ=255) tAATGAA‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGCAGCCAGCGCTATgg < 2:173721/100‑1 (MQ=255) | TCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATG‑A‑AAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGCAGCCAGCGCTATGG > NC_000913/270183‑270374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |