| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,379,266:1 | (C)7→9 | 100% | coding (732/1128 nt) | zapE ← | divisome ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,379,259 | 1 | . | C | 86.0% | 261.4 / 36.5 | 86 | coding (739/1128 nt) | zapE | divisome ATPase |
| Reads supporting (aligned to +/- strand): ref base . (5/7); new base C (35/39); total (40/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | NC_000913 | 3,379,259 | 2 | . | C | 54.7% | 157.9 / 155.4 | 86 | coding (739/1128 nt) | zapE | divisome ATPase |
| Reads supporting (aligned to +/- strand): ref base . (13/26); new base C (27/20); total (40/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.13e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 106 total aligned reads displayed.
GCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGCCTGAGTGAGTG > NC_000913/3379161‑3379348 || cacaGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGATGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑c < 1:2222764/100‑1 (MQ=255) cacaGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑c < 2:652465/100‑1 (MQ=255) cacaGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑c > 2:2106202/1‑100 (MQ=255) acaGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTCATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑cc > 1:2404053/1‑100 (MQ=255) acaGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑cc > 1:1467386/1‑100 (MQ=255) caGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑ccc > 1:1512789/1‑100 (MQ=255) aGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑ccca < 2:765530/100‑2 (MQ=255) gtagtaAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑ccc‑‑cc‑‑cc > 1:284425/1‑99 (MQ=255) agtaAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑ccc‑‑cc‑‑ccgc < 1:1350388/100‑4 (MQ=255) agtaAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTCGCCAATGGCCGATGGTTGATTTCTAACGGCGGTGAATTTTCTCG‑TT‑‑T‑‑‑C‑‑GCC‑‑CA‑‑C‑‑Gcc < 2:161322/100‑1 (MQ=255) gtaAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑ccc‑‑cc‑‑cccgc > 2:1916795/1‑96 (MQ=255) gtaAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCAATGTTGCTAATGGCCGATGGTTAATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑cac‑‑cc‑‑ccc > 1:2404219/1‑96 (MQ=255) taAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑ccc‑‑cc‑‑cccgcc < 1:1855111/100‑6 (MQ=255) aaaaGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTACCGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑ccc‑‑cc‑‑cccgcca > 2:492714/1‑94 (MQ=255) aaaGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAgc < 2:2019138/100‑1 (MQ=255) aaaGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑ccc‑‑cc‑‑cccgccag > 2:1220254/1‑93 (MQ=255) aaaGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑CA‑CCC‑‑CC‑‑C‑‑GCCAgc < 2:1707432/100‑1 (MQ=255) agagACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAgcgc > 2:2367959/1‑100 (MQ=255) agagACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑ccc‑‑cc‑‑cccgccagcg < 2:1591206/100‑10 (MQ=255) agagACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑ccc‑‑cc‑‑cccgccagcg < 1:2327922/100‑10 (MQ=255) gagaCCGCCAGCGTCTGTTTCTCGACGCCCATTGTTGCTAATGTCCGATTGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑ccc‑‑cc‑‑cccgccagcg < 2:1595794/99‑10 (MQ=255) gagaCCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAgcgc > 2:438816/1‑100 (MQ=255) gagaACGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑c‑‑ccc‑‑cc‑‑cccgccagcg < 2:707470/99‑10 (MQ=255) gaCCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCa > 2:1194426/1‑100 (MQ=255) gaCCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCa < 2:2254395/100‑1 (MQ=255) ccGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGCTTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAAc > 1:587618/1‑100 (MQ=255) ccGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAAc > 2:225945/1‑100 (MQ=255) ccGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAAcc < 2:2176935/100‑1 (MQ=255) gCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCa > 1:1796397/1‑100 (MQ=255) gCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGACCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCa > 1:1381255/1‑100 (MQ=255) ccAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGGGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGGCaa > 1:2175426/1‑95 (MQ=255) ccAGAGTCTGGTTCTCGACGCCCCTTCTTGTTAATGGCCGATGGTTGATTTCTACCGTCGGTGAATTTTCTCG‑TT‑‑TCCCC‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAAcc < 1:2198094/99‑1 (MQ=255) cAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAg < 2:211454/100‑1 (MQ=255) gCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGt > 1:1853249/1‑100 (MQ=255) gTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCCCC‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGtt < 1:567149/100‑1 (MQ=255) tCTGGTTCTCGCCGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGtt < 2:266289/97‑1 (MQ=255) tCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGACTTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGtt < 1:582132/98‑1 (MQ=255) cTGTTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTAt < 1:1811627/99‑1 (MQ=255) cTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTAt < 2:2117379/100‑1 (MQ=255) cTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTAt < 1:1496770/100‑1 (MQ=255) tGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATc > 2:758785/1‑100 (MQ=255) tGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATc > 1:1964096/1‑100 (MQ=255) tGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATcc < 2:391940/100‑1 (MQ=255) tGGTTCTCGACGCCCATTGTTGCTAAGGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATc < 2:1967811/100‑1 (MQ=255) tGGTTCTCAACGCCCCTTGTTGCTAATGGCCAATGGTAGATTTCTAACGTCGGTGAATTTGCGCG‑AG‑‑T‑‑‑C‑‑GCG‑‑CCTGC‑‑GCCAGCGCCAGCCGTAGTTTAt > 1:1506691/1‑99 (MQ=255) ggTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTAAATTTTCTCG‑TT‑‑T‑‑‑C‑‑CCCCACC‑‑C‑‑ACCAGCGGAAACCATTGTatat > 1:1276322/1‑98 (MQ=255) gTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCa > 2:520526/1‑100 (MQ=255) tctcGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCAttt > 2:1140562/1‑100 (MQ=255) cGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTgc < 2:1073865/100‑1 (MQ=255) cGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGcc > 1:1996027/1‑100 (MQ=255) cGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGccc > 2:2427690/1‑100 (MQ=255) cccATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCCACCATAGTTTATCCATTTGCGCCCgg > 1:428224/1‑100 (MQ=255) ccATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCgg > 2:62787/1‑100 (MQ=255) ccATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCggg < 2:1258643/100‑1 (MQ=255) aTTGTTTCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGt < 2:2568359/100‑1 (MQ=255) aTTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGt < 2:1796406/100‑1 (MQ=255) tgttgCTACTGCCCGATGGTTGATTTCTAACGTTGGTGAATTTTCTAG‑TT‑‑T‑‑‑CCTCCC‑‑CC‑‑C‑‑GCCATCGCCAACCCTAGTTTATCCATTTGCGCCCGGGtt < 1:569758/99‑1 (MQ=255) tgttgCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATGGTTTATCCATTTGCGCCCGGGTTTc > 1:894469/1‑100 (MQ=255) cTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCg < 2:2180457/100‑1 (MQ=255) cTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCg < 1:732944/100‑1 (MQ=255) tAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGt > 1:208372/1‑100 (MQ=255) ggCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAg > 2:1029734/1‑100 (MQ=255) gCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGt > 2:1375362/1‑100 (MQ=255) gATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCg < 2:811635/100‑1 (MQ=255) gctcttccgatCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGaa < 2:1174594/90‑1 (MQ=255) tGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGaaa > 1:1004983/1‑100 (MQ=255) gTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGaaa > 1:409214/1‑100 (MQ=255) gTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAAACATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGaaa > 2:1942134/1‑100 (MQ=255) gTTGATTTCTAACGGCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGaaa < 1:1215323/99‑1 (MQ=255) ttGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGc > 2:2539019/1‑100 (MQ=255) ttGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGctttcgcc < 2:1779908/100‑8 (MQ=255) tGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGc > 2:834300/1‑100 (MQ=255) gATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGctttcgcc < 2:1385342/100‑8 (MQ=255) gATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGcc < 2:1197218/100‑1 (MQ=255) aTTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCcac < 2:2326580/100‑1 (MQ=255) tttCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGctttcgccact < 2:895889/100‑11 (MQ=255) ttCTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCcaca < 2:526393/100‑1 (MQ=255) ttCTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAg < 2:2071925/100‑1 (MQ=255) ttCTAACGTCGGTGAATTTTCTCG‑GTGCC‑‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTGCATCGTGAAGTGGCGAAAGCcac < 1:49839/99‑1 (MQ=255) cTAACGTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGa > 2:287309/1‑100 (MQ=255) cTAACGTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGAt < 1:984042/100‑1 (MQ=255) gTCGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCGGCGCCAACCTTATTTTATCCATTTGCTCCCGGGTTTCATCGTGAGGTGGCGAAAGCCACAGATgc > 1:88848/1‑98 (MQ=255) gTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCCACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGcc < 1:395152/100‑1 (MQ=255) gTCGGTGAATTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGcc < 2:1802688/100‑1 (MQ=255) cGGTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGCCt < 1:1527543/100‑1 (MQ=255) cGGTCAATTTTCTCGCTT‑‑C‑‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTCGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGcc < 1:1612231/98‑1 (MQ=255) gTGAATTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGCCtga > 2:924231/1‑100 (MQ=255) tGAATTTTCTCG‑TT‑‑T‑‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGCCtgagtg > 2:162492/1‑100 (MQ=255) tcttttCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGCCtgagtg < 2:2016294/98‑1 (MQ=255) aaTTTTCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGCCtgagtg < 2:27050/100‑1 (MQ=255) aaTTTTCTCG‑TT‑‑GC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGCCtgagtg < 1:1420972/99‑1 (MQ=255) aTTTTCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCATAGATGCGCCtgagtgag > 2:663046/1‑100 (MQ=255) ttttCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGCCtgagtgag > 1:1521742/1‑100 (MQ=255) ttttCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGCCTgagtgagt < 1:2367944/100‑1 (MQ=255) tttCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCCTTTGCGCCCGGGTTTCATCGTGAAGTGGAGAAAGCCACAGATGCGCCTgagtgagt > 2:640502/1‑100 (MQ=255) tttCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGCCtgagtgag > 1:2016282/1‑99 (MQ=255) tttCTCG‑TT‑‑TC‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGCCTgagtgggt < 1:1773136/99‑1 (MQ=255) ttCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGCCTGagtgagtg > 2:2570379/1‑100 (MQ=255) ttCTCG‑TT‑‑TCC‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGCCTGagtgagtg < 2:1670251/100‑1 (MQ=255) tctcG‑TT‑‑T‑‑‑C‑‑CCC‑‑CC‑‑CCAGCCAGCGCCAACCATGATTTAACCAATTCGGCCCGGGTTTCCTCGTGAACTTGCGAAAGCAACAGATGCACCagaggaaga > 1:1092411/1‑93 (MQ=255) || GCACAGCGTAGTAAAAGAGACCGCCAGCGTCTGGTTCTCGACGCCCATTGTTGCTAATGGCCGATGGTTGATTTCTAACGTCGGTGAATTTTCTCG‑TT‑‑T‑‑‑C‑‑CCC‑‑CC‑‑C‑‑GCCAGCGCCAACCATAGTTTATCCATTTGCGCCCGGGTTTCATCGTGAAGTGGCGAAAGCCACAGATGCGCCTGAGTGAGTG > NC_000913/3379161‑3379348 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |