| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,520,504:1 | +T | 21.4% | intergenic (‑180/+167) | yjhU ← / ← yjhF | putative DNA‑binding transcriptional regulator; KpLE2 phage‑like element/putative transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,520,504 | 1 | . | T | 21.4% | 331.0 / 116.2 | 126 | intergenic (‑180/+167) | yjhU/yjhF | putative DNA‑binding transcriptional regulator; KpLE2 phage‑like element/putative transporter |
| Reads supporting (aligned to +/- strand): ref base . (60/39); new base T (10/17); total (70/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.80e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.81e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
TGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGA > NC_000913/4520406‑4520602 | tGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACTATTTGATTGATCGCCCACTATTCCCCCATACTGTAAAGCCGGAGACCT‑G‑c > 1:1663526/1‑100 (MQ=255) ttttATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTcc < 1:2032966/100‑1 (MQ=255) ttttATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTcc < 1:974474/100‑1 (MQ=255) ttATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTc > 1:1624095/1‑97 (MQ=255) tataCAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTGCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCgg > 2:1253934/1‑99 (MQ=255) ataCAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCt > 2:2060066/1‑100 (MQ=255) tattgATATTTTTTTCTTTTACGTGTTATAAACCAGCATTCCATTTGGGCGTTCGCCCGCTTTTCCTCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGttt < 1:2582992/96‑1 (MQ=16) taCAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCtt > 1:2139667/1‑100 (MQ=255) taCAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCtt < 1:1247448/100‑1 (MQ=38) taCAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCtt < 2:1514396/100‑1 (MQ=38) taCAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCtt < 1:834831/100‑1 (MQ=38) aCAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCttt < 1:1547201/100‑1 (MQ=38) aCAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCttt < 2:1315128/100‑1 (MQ=38) aCAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCttt < 2:1315169/100‑1 (MQ=38) aCAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCttt < 2:1696345/100‑1 (MQ=38) aCAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCtta > 2:834834/1‑99 (MQ=38) aCAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCt < 2:320447/98‑1 (MQ=38) aCAGATAGTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCCGTTCACCCATACTGTATAGCCGGAG‑CATGG‑CTCCGGCttt < 1:1107263/100‑1 (MQ=255) aCAGAGATTTGATGTTTTTACGTGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCt < 1:1515731/98‑1 (MQ=25) cAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTa > 1:473178/1‑100 (MQ=255) cAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTa > 1:798626/1‑100 (MQ=255) cAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCtt < 1:1423236/98‑1 (MQ=38) cAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCTTTa < 2:1729297/100‑1 (MQ=38) aGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCTTTAc < 2:721165/100‑1 (MQ=38) gATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACa > 2:1549185/1‑100 (MQ=255) gATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACa < 2:1860585/100‑1 (MQ=255) gATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCTTTACa < 2:1291536/100‑1 (MQ=38) atatTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAg < 1:1673858/100‑1 (MQ=255) atatTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCTTTACAg < 2:2479533/100‑1 (MQ=38) atatTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAG‑CAT‑GTCTCCGGCTTTACAg < 2:2411086/100‑1 (MQ=38) atTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTa > 2:1044551/1‑100 (MQ=255) ttttATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTAt > 2:1374657/1‑100 (MQ=255) tATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTAc < 2:2139681/100‑1 (MQ=255) tATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTAc < 2:2350065/100‑1 (MQ=255) tCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTga > 2:2106305/1‑100 (MQ=255) cTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTgag > 2:1846771/1‑100 (MQ=255) cTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTgag < 2:686799/100‑1 (MQ=255) ttttACATGAAATAAACCAGCATACCATGTGAGCGATCGCTCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTgaga < 2:1509322/100‑1 (MQ=255) ttttACATGAAATAAACCAGAATACCATTTTAGGGCTCACCCGCTGATCCCACATACAGTAAGGCCGGAGACAG‑A‑CTCGGGCTTTACAGTCTTACt > 1:2459652/1‑96 (MQ=255) tACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATa > 1:886273/1‑100 (MQ=255) acattgaaTAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑A‑CTCCGGCTTTACAGTATTACTGAGAAt < 1:2288105/92‑1 (MQ=255) cATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTGCGGCTTTACAGTATTACTGAGAATaca > 1:2591706/1‑100 (MQ=255) cATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATaca > 2:1504189/1‑100 (MQ=255) cATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATaca > 2:2355535/1‑100 (MQ=255) cATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATaca > 2:846937/1‑100 (MQ=255) cATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATaca > 2:88748/1‑100 (MQ=255) aTGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCTCATACTGTGAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTAATGAGAATacac > 2:1126488/1‑100 (MQ=255) aaaTAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCa > 1:2482064/1‑100 (MQ=255) aaTAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCAt < 2:1249070/100‑1 (MQ=255) aaCCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAg > 2:1856157/1‑100 (MQ=255) ccAGCATACCATTTGAGCGATCGCCCGCTGTTCCTCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAg < 1:328811/98‑1 (MQ=255) gaaTACCATTTGAACGATCGCCCGCTGTTCCACCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATaa > 2:1746457/3‑100 (MQ=255) aTACCTTTTGAGCGATCGCCCGCTGTTCCTCCATACTGTAGAGCCGGAGACAT‑T‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATc < 1:2293035/100‑1 (MQ=255) aTTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAgg < 2:1699295/100‑1 (MQ=255) gCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATACTCGAAGGTTCa > 1:336463/1‑98 (MQ=255) gCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAat < 2:473180/100‑1 (MQ=255) cGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAata < 1:1874593/100‑1 (MQ=255) cGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAata < 1:1948161/100‑1 (MQ=255) gATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAatat > 1:700642/1‑100 (MQ=255) cGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCt > 2:909387/1‑100 (MQ=255) cGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCt > 1:1693221/1‑100 (MQ=255) gTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCttttt < 2:532405/100‑1 (MQ=255) gTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCttttt > 2:1058464/1‑100 (MQ=255) ttCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATTAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTg < 1:1121709/100‑1 (MQ=255) ccccATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATc > 1:1325299/1‑100 (MQ=255) ccccATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATc < 2:2471330/100‑1 (MQ=255) ccccATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATc < 2:1901622/100‑1 (MQ=255) tctaTACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCg < 2:552448/97‑1 (MQ=255) cccATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCg > 1:103455/1‑100 (MQ=255) ccATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGc > 1:1308249/1‑100 (MQ=255) aTACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCgaga > 1:552446/1‑97 (MQ=255) tACTGTAAAGCCGGAG‑CATAT‑CACAGGCTTAACAGTATTACTGAGAATAAACCCATCACGCATACTCGAAGGTTCAATATCGACCCTTATTCATCGcta > 1:315106/1‑97 (MQ=19) aCTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGc < 1:2366242/100‑1 (MQ=255) aCTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGc < 2:2279819/100‑1 (MQ=255) aCTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGc > 2:1805823/1‑100 (MQ=255) cTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCg > 2:1465351/1‑100 (MQ=255) cTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCg < 1:88747/100‑1 (MQ=255) cTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCg > 2:2210814/1‑100 (MQ=255) cTGTAAAGCCGGAG‑CAT‑GTCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCg > 2:324495/1‑100 (MQ=38) tGTAAAGCCGGAG‑CAT‑GTCTCCGGCTTTACAGTATTACTGAGAATACACTCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGa > 1:1918287/1‑100 (MQ=37) tAAAGCCGGAG‑CAT‑GTCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGAtt > 1:1889492/1‑100 (MQ=38) aaaGCCGGAGACCT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTc > 1:1135316/1‑100 (MQ=255) aaaGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTAGTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGAt > 1:647248/1‑98 (MQ=255) aaaGCCGGAG‑CAT‑GTCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTc > 2:2222094/1‑100 (MQ=38) aaaGCCGGAG‑CAT‑GTCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTc > 2:498261/1‑100 (MQ=38) aaaGCCGGAG‑CAT‑GTCTCCGGCTTTACAGTATTACTAAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTc > 2:1829254/1‑100 (MQ=38) aaGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCg < 2:2476931/100‑1 (MQ=255) aaGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCg > 2:2193085/1‑100 (MQ=255) aGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGAt > 1:624992/1‑86 (MQ=255) aGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCg < 2:2271497/99‑1 (MQ=255) aGCCGGAG‑CAT‑GTCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATTGCCAGCGAtt > 2:816081/1‑97 (MQ=38) gCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTc > 2:347210/1‑100 (MQ=255) gCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTc > 2:733284/1‑100 (MQ=255) gCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTc < 1:568722/100‑1 (MQ=255) ccGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCa < 1:1561150/100‑1 (MQ=255) cGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCAc > 2:789489/1‑100 (MQ=255) cGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTACAATATCGCCCCATTTTAATCGCCCACGATTCGtaa > 2:860071/1‑97 (MQ=255) agaCAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGt < 1:2230279/100‑1 (MQ=255) gaCAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTg > 1:395833/1‑100 (MQ=255) cAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCa > 2:1801337/1‑100 (MQ=255) | TGATTTTATACAGATATTTTATTCTTTTACATGAAATAAACCAGCATACCATTTGAGCGATCGCCCGCTGTTCCCCCATACTGTAAAGCCGGAGACAT‑G‑CTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGA > NC_000913/4520406‑4520602 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |