| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 434,614:1 | (C)6→7 | 100% | intergenic (+56/‑33) | ribD → / → ribE | fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase/riboflavin synthase beta chain |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 434,608 | 1 | . | C | 58.4% | 197.7 / 165.9 | 101 | intergenic (+50/‑39) | ribD/ribE | fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase/riboflavin synthase beta chain |
| Reads supporting (aligned to +/- strand): ref base . (19/23); new base C (29/30); total (48/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
ATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACC > NC_000913/434511‑434700 | aTACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑cc < 1:579498/100‑1 (MQ=255) tACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑ccc < 2:322345/100‑1 (MQ=255) aCGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑ccc‑c < 1:705606/100‑1 (MQ=255) cGTCATGTAGGCCCGGATGTTTGCCTGCCTTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑ccc‑cc > 2:931117/1‑100 (MQ=255) cGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑ccc‑cc > 2:1215427/1‑100 (MQ=255) gTCATGTAGGACCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑ccc‑ccc > 2:782783/1‑100 (MQ=255) aTGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑ccc‑cccctg > 1:2024808/1‑97 (MQ=255) aTGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑ccc‑cccctg > 2:2427007/1‑97 (MQ=255) aTGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑ccc‑cccctg < 2:2309709/100‑4 (MQ=255) gTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑ccc‑cccctgcg < 1:747294/100‑6 (MQ=255) tAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCgg < 2:714823/100‑1 (MQ=255) tAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCgg > 2:127788/1‑100 (MQ=255) aGGTCCGGATGTTTGCCTGTATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCggg < 2:1112635/100‑1 (MQ=255) aGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCgggg > 1:1462129/1‑100 (MQ=255) ggCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGc < 2:580665/100‑1 (MQ=255) cccGGCTGTTTGCCTGCATTTAGTGGGTGCATGCTCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTCCGGGGcc > 1:2430818/1‑100 (MQ=255) cccGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGcc < 2:879701/100‑1 (MQ=255) cccGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGcc > 2:1674104/1‑100 (MQ=255) cccGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGc < 1:105494/99‑1 (MQ=255) cccGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCa < 2:2181994/100‑1 (MQ=255) cccGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCa > 1:1124597/1‑100 (MQ=255) cccGAATCTTTCCCTGCACTTAGTACGTACATGATCTCCCGGCTCGAACGGCACGCACCGCACGAACTATTATTCCAAAATCC‑G‑‑CCC‑CCCTGCgca < 1:1124703/96‑3 (MQ=255) ccGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCAAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCa < 1:713961/100‑1 (MQ=255) cGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGTGAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGcc > 2:1837885/1‑98 (MQ=255) cGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GCCCCC‑CCCTGCGGGGCCa < 2:1055456/100‑1 (MQ=255) cGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCAt > 2:625723/1‑100 (MQ=255) cGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCAt > 2:625802/1‑100 (MQ=255) aTGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTc < 1:2343700/100‑1 (MQ=255) tGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCg < 1:55109/100‑1 (MQ=255) tttGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGa > 1:320085/1‑100 (MQ=255) tGCCTGCATTTAGTGGGGGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAAcc < 2:119943/100‑1 (MQ=255) gCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAAcc < 1:23879/100‑1 (MQ=255) gCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAAcc < 2:1260976/100‑1 (MQ=255) gCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAAccc > 1:893247/1‑100 (MQ=255) ccTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAAccc < 1:415006/99‑1 (MQ=255) ccTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCg > 2:2438960/1‑100 (MQ=255) ccTGCATTTAGTGGGTACATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAACATTATGCTAAAATCCTC‑‑CCC‑CCCTCCGGGGCCATACTCGAAcc > 1:1286717/1‑99 (MQ=255) tGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCgaa < 2:2592915/100‑1 (MQ=255) gCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCgaag < 1:808039/100‑1 (MQ=255) gCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCgaag < 2:2539486/100‑1 (MQ=255) gCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCgaag > 1:1587589/1‑100 (MQ=255) cATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCgaag < 2:2492960/100‑1 (MQ=255) aTTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCgaagg < 1:385547/100‑1 (MQ=255) tttAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCgaagga > 2:776317/1‑100 (MQ=255) tAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCCGCCCTGCGGGGCCATACTCGAACCCgaaggaag > 1:1044864/1‑100 (MQ=255) tAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGgaaga > 1:642830/1‑100 (MQ=255) aGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGgaagaa < 2:1696005/100‑1 (MQ=255) gggTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGaaaa > 2:1237885/1‑100 (MQ=255) gggTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAAt < 2:745320/100‑1 (MQ=255) ggTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATg < 2:800811/100‑1 (MQ=255) gatctaTGATCTCCCGGCTCGAAAGGGAAGCAGCGCTCGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATg < 2:2472256/95‑1 (MQ=255) gTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGa > 1:922244/1‑100 (MQ=255) tGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATg < 2:1230902/99‑1 (MQ=255) cATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAAc > 1:1129742/1‑100 (MQ=255) cATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACa < 2:1989974/100‑1 (MQ=255) cATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACa < 1:2121051/100‑1 (MQ=255) aTGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACa < 1:931114/100‑1 (MQ=255) aTGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGagatc > 1:2472238/1‑96 (MQ=255) ctcCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACattatt < 2:824245/100‑1 (MQ=255) tcCCGGCTCGAAAGGGACGCATCGCAATAACTATCCTGCTAAACTCC‑G‑‑CCCGCCCTCCGGGCCCATACTCGCACCCCAAGGAACAACCTGCACattatt > 1:2023383/1‑99 (MQ=255) ccGGCTCGAAAGGGACGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAg < 2:2556246/100‑1 (MQ=255) ccGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGaa > 2:463740/1‑100 (MQ=255) ccGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGaa > 1:2328564/1‑99 (MQ=255) cGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAg < 1:1400206/100‑1 (MQ=255) cGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAAc > 1:2557825/1‑100 (MQ=255) gAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACg > 2:908617/1‑100 (MQ=255) aGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTg > 2:1881313/1‑100 (MQ=255) ggAAGCAGCGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCt < 2:2109833/100‑1 (MQ=255) gAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTAc > 1:969501/1‑100 (MQ=255) gcagcGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTAcccc > 2:1325890/1‑100 (MQ=255) cagcGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTAcccc < 1:2553095/100‑1 (MQ=255) cagcGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTAcccc < 2:1396618/100‑1 (MQ=255) cagcGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTAcccc > 2:2216225/1‑100 (MQ=255) cagcGCACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTAcccc < 1:2426992/100‑1 (MQ=255) cagcGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCg < 1:1426086/100‑1 (MQ=255) gcgcACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCgg < 2:1172528/100‑1 (MQ=255) gcgcACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCgg > 1:951678/1‑100 (MQ=255) cgcACGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGa < 2:469967/100‑1 (MQ=255) aCGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTTCGGGGCAATACTCGAACCCGAAGGAAGAAAATGAACATTATTGCAGCTAACGTTGCTACCCCg > 1:773614/1‑95 (MQ=255) aCGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGc > 2:1763776/1‑100 (MQ=255) cGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCt > 2:1063527/1‑100 (MQ=255) cGAAATATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCt > 2:801084/1‑100 (MQ=255) aaaTATTATGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAAAGTTGCTACCCCGGACGCTcg < 1:2569863/100‑1 (MQ=255) aaTATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTcgcg < 2:1952887/100‑1 (MQ=255) ttatGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCg < 2:262690/100‑1 (MQ=255) tatGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGcc < 1:2179653/100‑1 (MQ=255) tatGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGCCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGcc > 2:575156/1‑100 (MQ=255) tctcTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGcc < 2:120788/97‑1 (MQ=255) atGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGcc > 2:215101/1‑100 (MQ=255) tGCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCa > 2:1589751/1‑100 (MQ=255) gCTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCAt < 2:2171481/100‑1 (MQ=255) cTAAAATCC‑GCCCCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCAt > 1:2533134/1‑100 (MQ=255) cTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCaga > 1:120787/1‑98 (MQ=255) cTAAAATCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATc > 2:1567994/1‑100 (MQ=255) cTAAAATCC‑GC‑CCC‑CCCTACGGTGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCAGGACGCTCGCGTCGCCATc > 1:966900/1‑100 (MQ=255) cTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTTTTAAAGCTAGCGTTGCTACCCCGGACGCTCGCGTCGCCATCa > 1:1821264/1‑100 (MQ=255) cTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCa > 2:1909550/1‑100 (MQ=255) aaaaTCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCAc < 2:1844592/100‑1 (MQ=255) aaaaTCA‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCAc < 1:2146631/100‑1 (MQ=255) aaaTCC‑GC‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTGGCCATCAcc > 2:460095/1‑100 (MQ=255) | ATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGATCTCCCGGCTCGAAAGGGAAGCAGCGCACGAAATATTATGCTAAAATCC‑G‑‑CCC‑CCCTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACC > NC_000913/434511‑434700 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |