| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,004,160:1 | (G)7→8 | 100% | coding (214/711 nt) | ycbF → | putative periplasmic pilin chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,004,153 | 1 | . | G | 81.2% | 240.8 / 51.5 | 85 | coding (207/711 nt) | ycbF | putative periplasmic pilin chaperone |
| Reads supporting (aligned to +/- strand): ref base . (8/8); new base G (40/29); total (48/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTTTCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑C‑‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGA > NC_000913/1004054‑1004247 | cTTTCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGc‑c > 1:1216962/1‑100 (MQ=255) ttCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑C‑‑gg < 1:312063/100‑1 (MQ=255) ttCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑C‑‑gg > 1:2134496/1‑100 (MQ=255) cagacagaGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATGAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑C‑‑gggggg < 1:784211/98‑1 (MQ=255) cagacagaGAATAGATATCTATTTTACTTATTAATACCAGTCAGGAAGCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑C‑‑GGGGGGGa < 1:227177/100‑1 (MQ=255) gacagaGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAACTCAACCGCCCAACGCGTTGGGC‑C‑‑GGGGGGGAAg > 1:413432/1‑100 (MQ=255) cagaGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑C‑‑ggggggggaagc > 2:1190268/1‑95 (MQ=255) gagaATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTACCAGAAAAATAAACCGCCCAACCCGTTTGGC‑C‑‑GGGGGGGAAGCGTc > 1:1252114/1‑100 (MQ=255) agaATCGATATCTATTTTACTGAATAATACCGGTCAGGAATCCTGTCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCg < 1:749033/98‑1 (MQ=255) gaATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCg < 2:878660/100‑1 (MQ=255) gaATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCg < 1:1866643/100‑1 (MQ=255) gaATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCg < 2:2339134/100‑1 (MQ=255) aTCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGAc < 2:2575067/100‑1 (MQ=255) cGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑C‑‑GGGGGGGAAGCGTCGACAGt > 1:505060/1‑100 (MQ=255) atCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGcc < 2:155533/100‑1 (MQ=255) cTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAg > 2:2177237/1‑100 (MQ=255) cTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGACAg > 1:564802/1‑100 (MQ=255) tATTTTACTGACTAATACCAGTCAGGAAGCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑C‑‑GGGGGGGAAGCGTCGACAGTGcc < 1:1736002/96‑1 (MQ=255) tttACTGACTAATACCTGTCAGGAATCCTGGCTTATTAACAGTAACATCAACCGCCAAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCAAGCAc < 1:216745/99‑1 (MQ=255) tttACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCAcc < 2:148110/100‑1 (MQ=255) ttACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAAACAACCGCCCAACGCGTTGGGC‑C‑‑GGGGGGGAAGCGTCGACAGTGCCAGCACCAt < 2:1809924/100‑1 (MQ=255) tACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCAt < 2:1705091/100‑1 (MQ=255) tACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCAt > 1:2260796/1‑100 (MQ=255) cTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTa > 1:881611/1‑100 (MQ=255) tGACTAATACCAGTCAGGACTCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CGGGGGGGGGAAGCGTCGACAGTGCCAGCACCATTa < 2:289759/100‑1 (MQ=255) tGACTAATACCAGTCAGGAATCCTGGCGTAGTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTAc < 1:591830/100‑1 (MQ=255) gACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTAc > 1:1029954/1‑99 (MQ=255) gACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACt > 2:1790378/1‑100 (MQ=255) aCTAATTCCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTg < 2:1064999/100‑1 (MQ=255) cTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTgg > 2:2020140/1‑100 (MQ=255) cTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTgg > 1:751625/1‑100 (MQ=255) tAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑C‑‑GGGGGCGAAGCGTCGACAGTGCCAGCACCATTACTCGc > 1:2448420/1‑99 (MQ=255) gatctcAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CGGGGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGc < 1:861591/95‑1 (MQ=255) aaTACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGcc < 2:1586082/100‑1 (MQ=255) aaTACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGcc > 2:1086412/1‑100 (MQ=255) aaTACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGcc < 2:909680/100‑1 (MQ=255) ccAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTc > 1:1240438/1‑100 (MQ=255) cAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CGGGGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGcagatc > 2:861594/1‑95 (MQ=255) cAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTcc < 2:2196792/100‑1 (MQ=255) cAGTCAGGAATCCTGGCTTATTAACAGTAAAATAAACAGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTAGACAGTGCCAGCACCATTACTGGCCGCTcc > 1:1096698/1‑100 (MQ=255) aGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CGGGGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTcc > 2:969009/1‑100 (MQ=255) aGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCg > 2:1479295/1‑100 (MQ=255) tCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGcc < 2:465359/100‑1 (MQ=255) cAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCa > 2:1635242/1‑100 (MQ=255) ggAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑C‑‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACtt > 1:120221/1‑100 (MQ=255) tCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑C‑‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATtc < 2:1033110/100‑1 (MQ=255) cTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATtct > 2:439777/1‑100 (MQ=255) cTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑C‑‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATtctc > 2:2389517/1‑100 (MQ=255) ggCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTcc < 2:752698/100‑1 (MQ=255) ggCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTcc > 2:673101/1‑100 (MQ=255) gCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCt > 1:1981110/1‑100 (MQ=255) gCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCt < 1:2091756/100‑1 (MQ=255) gCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑C‑‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTg < 1:531030/100‑1 (MQ=255) cTTATTAACAGTAAAATCAACCGCCCAACGGGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTg < 2:1094286/100‑1 (MQ=255) ntattaACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGa > 1:332254/2‑100 (MQ=255) tattaACAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGaa > 1:1889368/1‑100 (MQ=255) attaACAGTAAAATAAACCGCCCCACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCTAGCACCATAACTTGCCGCTCCGCCACTTATTCTCTTGAAg > 1:395726/1‑100 (MQ=255) aaCAGTAAAATCAACCGCCCAACGTGTTGGGT‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGcc < 2:1256915/99‑1 (MQ=255) aCAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCg > 2:5748/1‑100 (MQ=255) cAGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCgg < 1:1431526/100‑1 (MQ=255) aGTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGt > 2:681980/1‑100 (MQ=255) gTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTa > 2:589577/1‑100 (MQ=255) gTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTa < 2:1971280/100‑1 (MQ=255) gTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTa > 2:307936/1‑100 (MQ=255) gTAAAATCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTATCCTGAAGCCCGGTa > 2:2558524/1‑100 (MQ=255) aaaTCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGa > 1:314668/1‑100 (MQ=255) cccccccggCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGAc > 1:676740/9‑100 (MQ=255) aTCAACCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACa < 2:332256/100‑1 (MQ=255) ccccggCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAgg > 1:211139/6‑100 (MQ=255) ccccggCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAgg > 1:2443223/6‑100 (MQ=255) cccggCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGc < 2:676743/96‑1 (MQ=255) aaCCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACGATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGc > 1:1613725/1‑100 (MQ=255) aaCCGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAg < 1:542081/98‑1 (MQ=255) ccggCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCa > 2:1160349/4‑100 (MQ=255) ccggCCCAACGCGTTGGGC‑C‑‑GGGGGGGAAGCGTCGACCGTGCCAGCACCAGTACGGGCCGCCCCGCCACTTATCCTCCTGAAGCCCGGTACGACAGGc > 1:2088966/4‑98 (MQ=255) ccggCCCAACGCGTTGGGC‑C‑‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCAc > 1:1294855/4‑100 (MQ=255) cggCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCAc > 2:1108614/3‑100 (MQ=255) ggCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACg > 2:215780/2‑100 (MQ=255) cGCCCAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACg > 2:446064/1‑100 (MQ=255) ccAACGCGTTGGGCGG‑‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTg < 2:504608/100‑1 (MQ=255) ccAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTg > 2:67752/1‑100 (MQ=255) ccAACGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTg > 2:734647/1‑100 (MQ=255) aaCGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTgcg > 2:1807206/1‑100 (MQ=255) aaCGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTgcg > 2:1578687/1‑100 (MQ=255) aaCGCGTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTgc > 1:720489/1‑99 (MQ=255) gcgTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCtt < 2:211141/100‑1 (MQ=255) cgTTGGGC‑T‑‑GGGGGGGAAGCGTCGTCCGTGCCAGCACCATTACGGGCCGCTACGCCACTTCTTGTCCGGAAGCCTGGTACGACAGGCACGTTGCGCt < 1:2020343/97‑1 (MQ=255) gTTGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGc < 2:1473201/100‑1 (MQ=255) ttGGGC‑CG‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCt < 2:915700/100‑1 (MQ=255) tGGGC‑C‑‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTga < 2:539861/100‑1 (MQ=255) | CTTTCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGC‑C‑‑GGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGA > NC_000913/1004054‑1004247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |