| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1327735 = | NA (NA) | 12 (0.140) | 8/162 | NT | NA | intergenic (+8/+32) | rluB/btuR | 23S rRNA pseudouridine(2605) synthase/cob(I)yrinic acid a,c‑diamide adenosyltransferase |
| ? | NC_000913 | 1327758 = | NA (NA) | intergenic (+31/+9) | rluB/btuR | 23S rRNA pseudouridine(2605) synthase/cob(I)yrinic acid a,c‑diamide adenosyltransferase | |||||
GGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1327839‑1327735‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcatTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAG > NC_000913/1327758‑1327856 GGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTCAAAATGCCGGATATGACGTC < 1:1587654/99‑1 TAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGG < 1:968202/100‑1 AAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGGC > 2:2393514/1‑100 GTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGGCAT > 1:203407/1‑100 TACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGACGTCATATCCGGCATTTTTAC < 1:319475/100‑1 TACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGACGTCATATCCGGCATTTTTAC < 2:195889/100‑1 TACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGACGTCATATCCGGCATTTTTAC < 2:1447724/100‑1 ACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGACGTCATATCCGGCATTTTTACA < 1:1942889/100‑1 CCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGACGTCATATCCGGCATTTTTACAGAT < 1:1443185/99‑1 TGTAAAAATGCCGGATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTCCGCTTTTACACCGGCATCAAACGCATGTTCGACGGGGCG > 1:2353373/1‑99 TAAAAATGCCGGATATGACGT‑CGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAAT > 1:240948/1‑100 AAAATGCCGGATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATT > 2:2279968/1‑100 AATGCCGGATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCA > 1:1717615/1‑100 AATGCCGGATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTATACACCGTCATCAAACGCATGTTTGACGCGGCGTAATTCA > 1:739933/1‑100 ATGCCGGATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCAC > 1:417600/1‑100 GGATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACAGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTAC > 2:619124/1‑99 CCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAG > 2:2200105/1‑100 CGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGT < 1:777357/100‑1 GCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTC < 1:691958/100‑1 GCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTC > 2:1959798/1‑100 CATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCA < 1:2221874/100‑1 ATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAA < 1:2345361/100‑1 ATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAA < 2:2418823/100‑1 TTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAG < 2:1731126/100‑1 GGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1327839‑1327735‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcatTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAG > NC_000913/1327758‑1327856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |