| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2489189 = | 80 (0.870) | 15 (0.180) | 9/164 | NT | 16.6% | intergenic (‑21/+53) | yfdE/yfdV | acetyl‑CoA:oxalate CoA‑transferase/putative transporter |
| ? | NC_000913 | 2489214 = | 77 (0.910) | intergenic (‑46/+28) | yfdE/yfdV | acetyl‑CoA:oxalate CoA‑transferase/putative transporter | |||||
GCTTTGTCGTCACGGCTCCCTTGTGGATTTATGTCAGTCGACTGGTTTCATAATTAATCATGTTATTGATTTTACATAAATGCCGAAGTGTCTTTTCACCTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2489294‑2489189‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcggcATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGACGACAAAGCCCAGTACGCTCACAGCC > NC_000913/2489214‑2489311 GCTTTGTCGTCACGGCTCCCTTGTGGATTTATGTCAGTCGACTGGTTTCATAATTAATCATGTTATTGATTTTACATAAATGCCGAAGTGTCTTTTCACC > 2:2518176/1‑100GCTGTGTCGTCACGGCTGCCTTGTGGATTTATGTCAGTCGACTGGTTTCATAATTAATCATGTTATTGATTTTACATAAATGCCGAAGTGTCTTTTCACC < 1:756903/100‑1 TTGTCGTCACGGCTCCCTTGTGGATTTATGTCAGTCGACTGGTTTCATAATTAATCATGTTATTGATTTTACATAAATGCCGAAGTGTCTTTTCACCTTC < 2:1852387/100‑1 GTCGTCACGGCTCCCTTGTTGATTTATGTCAGTCGTCTGGTTTCATAATTAATCATTTTATTGATTTTACATAAATGCCGAAGTGTCTTTTCACCTTCGG < 1:1648563/100‑1 GTCGTCACGGCTCCCTTGTGGATTTATGTCAGTCGACTGGTTTCATAATTAATCATGTTATTGATTTTACATAAATGCCGAAGTGTCTTTTCACCTTCGG > 2:15864/1‑100 TCGTCACGGCTCCCTTGTGGATTTATGTCAGTCGACTGGTTTCATAATTAATCATGTTATTGATTTTACATAAATGCCGAAGTGTCTTTTCACCTTCGGC < 1:1019314/100‑1 ACGGCTCCCTTGTGGATTTATGTCAGTCGACTGGTTTCATAATTAATCATGTTATTGATTTTACATAAATGCCGAAGTGTCTTTTCACCTTCGGC < 1:22531/95‑1 TAATTAATCATGTTATTGATTTTACATAAATGCCGAAGTGTCTTTTCTCCTTCGTCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGA > 1:374853/1‑100 TATTGATTTTACATAAATGCCGAAGTGTCTTTTCACCTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCC > 2:723243/1‑100 TACATAAATGCCGAAGTGTCTTTTCACCTTCGGCTTTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAG > 2:429671/1‑100 TACATAAATGCCGAAGTGTCTTTTCACCTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGA > 1:680668/1‑99 CATAAATGCCGAAGTGTCTTTTCACCTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCC > 2:501800/1‑100 CATAAATGCCGAAGTGTCTTTTCACCTTCGGCAGTTATGTAACATCAATCACATGATTAATTATAAAACCATTCGACTGACATAAATCCACAAGGG > 1:798551/1‑96 AATGCCGAAGTGTCTTTTCACCTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGA > 1:534731/1‑100 AATGCCGAAGTGTCTTTTCACCTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGA > 2:1095997/1‑100 AATGCCGAAGTGTCTTTTCACCTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGA > 2:1770789/1‑100 TGCCGAAGTGTCTTTTCACCTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGACG > 1:189663/1‑100 TGCCGAAGTGTCTTTTCACCTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGACG > 2:1585963/1‑100 GCCGAAGTGTCTTTTCACCTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTAGACTGACATAAATCCAAAAGGGAGCCGTaaaga > 1:540281/1‑95 CCGAAGTGTCTTTTCACCTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGACGAC > 2:2274607/1‑100 GAAGTGTCTTTTCACCTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGACGACAA > 1:1961171/1‑100 GTCTTTTCACCTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGACGACAAAGCCC < 1:1770780/100‑1 CTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGACGACAAAGCCCAGTACGCTCA > 2:2321401/1‑100 CTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGACGACAAAGCCCAGTACGCTC > 1:2110548/1‑99 CTTCGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCACTCGACTGACATAAATCCACAAGGGAGCCGTGACGACAAAGCCCAGTACGCTCA > 1:1436301/1‑100 CGGCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGACGACAAAGCCCAGTACGCTCACAG < 2:860648/100‑1 GCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGACGACAAAGCCCAGTACGCTCACAGCC > 2:1395388/1‑100 GCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGACGACAAAGCCCAGTACGCTCACAGCC > 1:2321522/1‑100 GCATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGACGACAAAGCCCAGTACGCTCACAGCC > 1:1608323/1‑100 GCTTTGTCGTCACGGCTCCCTTGTGGATTTATGTCAGTCGACTGGTTTCATAATTAATCATGTTATTGATTTTACATAAATGCCGAAGTGTCTTTTCACCTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2489294‑2489189‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcggcATTTATGTAAAATCAATAACATGATTAATTATGAAACCAGTCGACTGACATAAATCCACAAGGGAGCCGTGACGACAAAGCCCAGTACGCTCACAGCC > NC_000913/2489214‑2489311 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |