| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2638935 = | 77 (0.840) | 18 (0.210) | 8/168 | NT | 19.6% | coding (349/621 nt) | yfgM | ancillary SecYEG translocon subunit; putative anti‑RcsB factor |
| ? | NC_000913 | 2638965 = | 75 (0.870) | coding (319/621 nt) | yfgM | ancillary SecYEG translocon subunit; putative anti‑RcsB factor | |||||
AAAAATACTTATGGTGCGCTGGCTTCTTTGGAACTTGCGCAGCAATTTGTTGACAAAAATGAACTAGAGAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2639037‑2638935‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAAGTATTTTTATTTTCAGCAGCAAATTTTTCCGCCG > NC_000913/2638965‑2639063 AAAAATACTTATGGTGCGCTGGCTTCTTTGGAACTTGCGCAGCAATTTGTTGACAAAAATGAACTAGAGAAAGCTGCCGCCCAGTTACAACAGGGGCTGG < 2:672574/100‑1AAAAATACTTATGGTGCGCTGGCTTCTTTGGAACTTGCGCAGCAATTTGTTGACAAAAATGAACTAGAGAAAGCTGCCGCCCAGTTACAACAGGGGCTGG > 2:2213352/1‑100 AAAATACTTATGGTGCGCTGGCTTCTTTGGAACTTGCGCAGCAATTTGTTGACAAAAATGAACTAGAGAAAGCTGCCGCCCAGTTACAACAGGGGCTGGC > 2:358936/1‑100 AAAATACTTATGGTGCGCTGGCTTCTTTGGAACTTGCGCAGCAATTTGTTGACAAAAATGAACTAGAGAAAGCTGCCGCCCAGTTACAACAGGGGCTGGC < 2:1252271/100‑1 AAATACTTATGGTGCGCTGGCTTCTTTGGAACTTGCGCAGCAATTTGTTGACAAAAATGAACTAGAGAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCA < 2:225971/100‑1 GAACTAGAGAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCG > 2:1835416/1‑100 ACTAGAGAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCA > 2:1095787/1‑100 ACTAGAGAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGACAGCG > 1:1072831/1‑98 CTAGAGAAAGCTGCCGCCCAGTTACAACAGTGGCTGGCAGCTTTCTCGAGTTCATTTTGGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCCCAC > 1:2063054/1‑100 CTAGAGAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCAC > 2:2173496/1‑100 CTAGAGAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCAC > 2:2174786/1‑100 GAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAA > 2:843368/1‑100 GAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAA > 2:2532046/1‑100 GAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAA > 2:245881/1‑100 GAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAA > 2:2445548/1‑100 GAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAA > 2:2305947/1‑100 GAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAA > 2:2234308/1‑100 GAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAA > 1:1826081/1‑100 AAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAAGT > 2:2498116/1‑100 AAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAAGT > 2:1335355/1‑100 GCTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAAGTAT > 2:2279561/1‑100 CTGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAAGTATT > 1:112922/1‑100 TGCCGCCCAGTTACAACAGGGGCTGGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAAGTATTT > 2:2251190/1‑100 GGCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAAGTATTTTTATTTTCAGCAGCAAATTTTTCC < 2:1941838/100‑1 GCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAAGTATTTTTATTTTCAGCAGCAAATTTTTCCG > 2:2167697/1‑100 GCAGCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAAGTATTTTTATTTTCAGCAGCAAATTTTTCCG < 1:1737648/100‑1 GCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAAGTATTTTTATTTTCAGCAGCAAATTTTTCCGCCG > 2:288700/1‑100 AAAAATACTTATGGTGCGCTGGCTTCTTTGGAACTTGCGCAGCAATTTGTTGACAAAAATGAACTAGAGAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2639037‑2638935‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagCTTTCTCTAGTTCATTTTTGTCAACAAATTGCTGCGCAAGTTCCAAAGAAGCCAGCGCACCATAAGTATTTTTATTTTCAGCAGCAAATTTTTCCGCCG > NC_000913/2638965‑2639063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |