| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2659526 | 82 (0.890) | 17 (0.200) | 10/162 | NT | 18.9% | intergenic (‑59/+37) | hscB/iscA | HscA co‑chaperone, J domain‑containing protein Hsc56; IscU‑specific chaperone HscAB/FeS cluster assembly protein |
| ? | NC_000913 | = 2659541 | 71 (0.850) | intergenic (‑74/+22) | hscB/iscA | HscA co‑chaperone, J domain‑containing protein Hsc56; IscU‑specific chaperone HscAB/FeS cluster assembly protein | |||||
CGAGTTGATAGCGGGCAGGCAAGCCAAAGAGGGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2659422‑2659526‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaccccacCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACCTGATTCGCCGTTATCGCGGCGGATCGCAGCCCTGAGAATGTTATGGATTACTTCACCCTCTTTGGCT < NC_000913/2659541‑2659443 CGAGTTGATAGCGGGCAGGCAAGCCAAAGAGGGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAAC < 2:1094103/100‑1CGAGTTGATAGCGGGCAGGCAAGCCAAAGAGGGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAAC < 1:6442/100‑1CGAGTTGATAGCGGGCAGGCAAGCCAAAGAGGGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAAACAGGTAAAACAAAC > 1:1764907/1‑100 GAGTTGATAGCGGGCAGGCAAGCCAAAGAGGGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACC > 2:1920708/1‑100 GAGTTGATAGCGGGCAGGCAAGCCAAAGAGGGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACC < 2:1015088/100‑1 TTGATAGCGGGCAGGCAAGCCAAAGAGGGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCA < 1:2404362/100‑1 TTGATAGCGGGCAGGCAAGCCAAAGAGGGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCA > 1:410817/1‑100 TGATGGCGGGCAGGCACGCCCAAGAGGGTGAAGTAATCGATAACACTCTCAGGGCTGCGATCCGCAGCGATAACGGCGAATCAGGTAAAACAAACCC > 1:2094262/1‑97 AAGAGGGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGG < 1:463767/100‑1 AAGAGGGTGAAGTAATCCATAACATTCTCAGGCCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGG < 1:1814930/100‑1 AGAGGGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGT < 1:2136495/100‑1 GAGGGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGTT < 1:1868583/100‑1 GAGGGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGTT < 1:77045/100‑1 AGGGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGTTT < 2:1126869/100‑1 GGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGTTTGT < 1:1620983/100‑1 GGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGTTTGT < 1:2275737/100‑1 TGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGTTTGTTT < 2:2117392/100‑1 TGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGTTTGTTT < 1:57720/100‑1 GAAGTAATCCATAACTTTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGTTTGTTTT < 2:2554101/100‑1 GAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGTTTGTTTT < 2:1937285/100‑1 GAAGTAATCCATAACATGCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGTTTGTTT < 1:798895/99‑1 GTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACC < 2:1531222/100‑1 TAATCCATAGCATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACCT < 1:483920/100‑1 TAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACCT < 1:601137/100‑1 AACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCACCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACCTGATTCGCC < 2:197619/100‑1 gatctCCCCACCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACCTGATTCGCCGTTATCGCGGCGGATCGCAGCCCTGCGAATGTTATGGATTACTTCACC < 1:1505592/95‑1 ACCCCACCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACCTGATTCGCCGTTATCGCGGCGGATCGCAGCCCTGAGAATGTTATGGGTTACTTCACCCTCT > 1:507935/1‑100 CCCCACCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACCTGATTCGCCGTTATCGCGGCGGATCGCAGCCCTGAGAATGTTATGGATTACTTCACCCTCTT > 2:1031048/1‑100 CCCCACCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACCTGATTCGCCGTTATCGCGGCGGATCGCAGCCCTGAGAATGTTATGGATGACTTCACCagatc > 2:1505601/1‑95 CCCACCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACCTGATTCGCCGTTATCGCGGCGGATCGCAGCCCTGAGAATGTTATGGATTACTTCACCCTCTTT < 1:2405307/100‑1 CCACCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACCTGATTCGCCGTTATCGCGGCGGATCGCAGCCCTGAGAATGTTATGGATTACTTCACCCTCTTTG < 2:2187648/100‑1 CCACCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACCTGATTCGCCGTTATCGCGGCGGATCGCAGCCCTGAGAATGTTATGGATTACTTCACCCTCTTTG > 2:970148/1‑100 ACCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACCTGATTCGCCGTTATCGCGGCGGATCGCAGCCCTGAGAATGTTATGGATTACTTCACCCTCTTTGGC < 1:506614/100‑1 CCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACCTGATTCGCCGTTATCGCGGCGGATCGCAGCCCTGAGAATGTTATGGATTACTTCACCCTCTTTGGCT < 2:2517143/100‑1 CGAGTTGATAGCGGGCAGGCAAGCCAAAGAGGGTGAAGTAATCCATAACATTCTCAGGGCTGCGATCCGCCGCGATAACGGCGAATCAGGTAAAACAAACCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2659422‑2659526‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaccccacCGTGGTCGCCTGCGCGTGGGGTTTGTTTTACCTGATTCGCCGTTATCGCGGCGGATCGCAGCCCTGAGAATGTTATGGATTACTTCACCCTCTTTGGCT < NC_000913/2659541‑2659443 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |