| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2900520 = | 85 (0.930) | 14 (0.170) | 8/156 | NT | 15.2% | intergenic (‑247/‑72) | ygcW/yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein |
| ? | NC_000913 | 2900560 = | 82 (1.020) | intergenic (‑287/‑32) | ygcW/yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein | |||||
GCGAGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2900629‑2900520‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttacttttctcTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTT > NC_000913/2900560‑2900658 GCGAGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGAT > 2:1065349/1‑100 AGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTAC > 2:1950690/1‑100 TTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTT > 2:1307219/1‑100 TATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTT > 1:2595838/1‑99 TCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC < 1:743845/100‑1 acgacaATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCa < 2:156597/91‑2 GCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTT < 1:1009799/100‑1 ATATGAGTTGTGTTGCATATATTATACCCATTAATAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC < 1:332020/90‑1 ATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCTGCTATTTCAGGTGGATTACTTTACTCTTTTTTTTGTCTATTACAAATGGGAATACTATATtt > 1:1458007/1‑95 ATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCATCACAACT > 1:1987165/1‑99 AAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATAT > 2:1126332/1‑97 AAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGtctt > 2:996843/1‑96 AAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGT > 1:1961151/1‑100 AAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGT > 2:2267209/1‑100 AAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCG > 2:1233220/1‑99 AGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATAT > 2:2012192/1‑91 AGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATACGCAACACAACTCATATCGCCGT > 2:437825/1‑97 nAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTTTTTTTTTCAAATGGAAATACGATATGCAACACAACTCATATCGCCG > 1:1700456/2‑95 AAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTTTCTTACAAATGGGAATACGATATACAACACAACTCATATCGCCGTTGGCTAAC > 1:503477/1‑100 AAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCTTTTGATA > 2:1488210/1‑98 AAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACC < 1:1233216/100‑1 TACTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCG > 1:1153480/1‑100 CTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCTGCGG > 2:568126/1‑99 CTTTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGC < 1:2217116/100‑1 TTTCTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTATTTTTATTGGCGGCGT > 2:1232476/1‑100 CTCTTTTTTTTTTTTTTTATAAATGGGAATACGGTATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGTCGGCGTTA > 1:1703907/1‑99 CTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAG < 2:416229/100‑1 CTCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGGTGGATTTCCCTCGCGATAATTAGTTTTAGCTGTGGC > 2:176484/1‑95 TCTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGGTGGCTTACCCTCGCGATAATTAGTTTTTGCGGCTGTGTTAGT > 2:227806/1‑100 CTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCAGCGGCGTTAGTT > 1:2357992/1‑100 GCGAGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2900629‑2900520‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttacttttctcTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTT > NC_000913/2900560‑2900658 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |