| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3765492 = | NA (NA) | 23 (0.260) | 8/170 | NT | 18.5% | coding (3310/4134 nt) | rhsA | Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor |
| ? | NC_000913 | 3767207 = | 106 (1.160) | intergenic (+28/‑14) | yibA/rhsJ | putative immunity protein for polymorphic toxin RhsA; HEAT‑domain protein; lethality reduction protein/Rhs‑family protein | |||||
CACCGGGTCCATCTGGTTTTGCATCTGCTCCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTttcc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3765590‑3765492‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCCGCCGGCAC‑GGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGA > NC_000913/3767207‑3767308 CACCGGGTCCATCTGGTTTTGCATCTGCTCCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTT > 2:1564077/1‑100CACCGGGTCCATCTGGTTTTGCATCTGCTCCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTT < 2:1369140/100‑1CACCGGGTCCATCTGGTTTTGCATCTGCTCCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTT > 2:2467009/1‑100 ACCGGGTCCATCTGGTTTTGCATCTGCTCCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTT > 1:150506/1‑100 ACCGGGTCCATCTGGTTTTGCATCTGCTCCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTT < 1:15599/100‑1 ACCGGGTCCATCTGGTTTTGCATCTGCTCCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTT > 2:2204866/1‑100 ACCGGGTCCATCTGGTTTTGCATCTGCTCCACGGTCACGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTT > 1:1386641/1‑100 CCGGGTCCATCTGGTTTTGCATCTGCTTCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTn < 1:529886/100‑2 CCGGGTCCATCTGGTTTTGCATCTGCTCCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTC > 2:1044162/1‑100 CCGGGTCCATCTGGTTTTGCATCTGCTCCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTC > 1:646697/1‑100 CGGGTCCATCTGGTTTTGCATCTGCTCCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCC < 1:1451/100‑1 CGGGTCCATCTGGTTTTGCATCTGCTCCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCC > 1:975864/1‑100 CGGGTCCATCTGGTTTTGCATCTGCTCAACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCC < 2:1211398/100‑1 GGGTCCATCTGGTTTTGCATCTGCTCCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCC > 2:2279003/1‑99 TGCATCTGCTCCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGtgctggtgca > 1:256196/1‑90 GGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGCAC‑GGTGCAGATGCTCGACCGGCT < 2:1907790/100‑1 TCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGCAC‑GGTGCAGATGCTCGACCGGCTGG < 2:409513/100‑1 TCAGGCCGCACGATGCCAGCCACCGGCGGCTCTCCTCTCTCACCCGGGCAGCCAGGATTTCACTTTCCCGCCGGCAC‑GGTGCAGATGCTCGACCGGCTGG < 1:1748588/100‑1 CAGGCCTCACGATGTCAGCCAGCGTCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTCTCCCGCCGGCAC‑GGTGCAGATGCTCGGCCGGCTGG < 1:357640/99‑1 CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGG < 2:2323127/100‑1 GGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGCAC‑GGTGCAGATGCTCGACCGGCTGGAAA < 1:623751/100‑1 GCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCTGGCAC‑GGTGCAGATGCTCGACCGGCTGGAAAG < 2:2462577/100‑1 GCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGCAC‑GGTGCAGATGCTCGACCGGCTGGAAAG < 2:485890/100‑1 CCGCACGATGCCAGCTAGCGGCGGCTTTCCTCACTCACCCGGTCAGCTAGGATTTCACTTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAG < 1:1825008/100‑1 CCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCCCCCGGTCAGCCAGGATTTCACTTCCCCGCCGGTGCTGGTGCAGATGCCCGACCGGCTGGAAAG < 1:1884402/100‑1 CCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAG < 1:1191424/100‑1 CCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAG < 2:256199/100‑1 CCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAG < 1:1693535/100‑1 CCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAG < 1:1561634/100‑1 CCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCAACCGGTCAGCCAGGATTTCACTTTCCAGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAG < 1:122259/100‑1 CCGCACGATACCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAG < 1:1046515/100‑1 CGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGT < 1:663973/100‑1 GCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTG < 1:577794/100‑1 GCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGCAC‑GGTGCAGATGCTCGACCGGCTGGAAAGTGA < 2:1834854/100‑1 ACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGCAC‑GGTGCAGATGCTCGACCGGCTGGAAAGTGAAA < 2:1831216/100‑1 CGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGCAC‑GGTGCAGATGCTCGACCGGCTGGAAAGTGAAAT < 2:1540893/100‑1 AGCCAGCGGCGGCTTTCCTCCCTCACCCGGTCGGCCAGGATTTCACTTTCCCGCCGGCAC‑GGTGCGGATGCTCGACCGGCTGGAAAGTGAACTCCTGGCT < 1:442123/100‑1 TCCCGCCGGCAC‑GGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTG > 2:2270276/1‑100 CCCGCCGGCAC‑GGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGA > 2:1074046/1‑100 CCCGCCGGCAC‑GGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGA > 1:2498463/1‑100 CACCGGGTCCATCTGGTTTTGCATCTGCTCCACGGTCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTttcc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3765590‑3765492‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCCGCCGGCAC‑GGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGA > NC_000913/3767207‑3767308 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |