| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3861919 | 77 (0.840) | 14 (0.170) | 6/164 | NT | 16.3% | pseudogene (69/815 nt) | glvG | pseudogene; probable 6‑phospho‑beta‑glucosidase |
| ? | NC_000913 | = 3861934 | 73 (0.870) | pseudogene (54/815 nt) | glvG | pseudogene; probable 6‑phospho‑beta‑glucosidase | |||||
TTCTTTAAGGATGACTTTACAGGCTTCGGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3861814‑3861919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaggCATCGTGTTGATGCTCCTGGCGAATCAGGACCGTTTCCCGCTTCGTGCACTGAAATTTTATGATAACGATGGTGCGCGGCAGGAAGTGATTGCCGAAGC < NC_000913/3861934‑3861836 TTCTTTAAGGATGACTTTACAGGCTTCGGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTC < 2:6536/100‑1TTCTTTAAGGATGACTTTACAGGCTTCGGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTC < 1:1538735/100‑1 TCTTTAAGGATGACTTTACAGGCTTCGGCAATCACTTCCTGCCGCGCATCATAGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCG > 1:223741/1‑100 CTTTAAGGATGACTTTACAGGCTTCGGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGTGGGAAACGGTCCTGATTCGC > 2:1269390/1‑100 CTTTAAGGATGACTTTACAGGCTTCGGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGC > 1:256491/1‑100 TTTAAGGATGACTTTACAGGCTTCGGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCC > 1:302842/1‑100 tgAAGGATGACTTTACAGGCTTCGGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCA < 1:1573740/98‑1 TTAAGGATGACTTTACAGGCTTCGGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCA < 2:657755/100‑1 TTAAGGATGACTTTACAGGCTTCGGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCA < 1:1884250/100‑1 TTAAGGATGACTTTACAGGCTTCGGCAATCACTTCCTGCCGCGCACCATCGTTATAATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGC > 2:2193242/1‑98 TAAGGATGACTTTACAGGCTTCGGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAG < 1:885444/100‑1 TAAGGATGACTTTACAGGCTTCAGCAATCAATTCCTACCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGATCCAGATTCGCCA > 1:1706355/1‑99 AAGGATGACTTTACAGGCTTCGGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGG > 2:1789144/1‑100 GGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGGCATCGTGTTGATGCTCCTGGC < 2:15771/100‑1 GGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGGCATCGTGTTGATGCTCCTGGC < 1:1183482/100‑1 GGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGGCATCGTGTTGATGCTCCTGGC < 2:341979/100‑1 GGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGGCATCGTGTTGATGCTCCTGGC < 2:672749/100‑1 GGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGGCATCGTGTTGATGCTCCTGGC < 1:1316821/100‑1 GGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGGCATCGTGCTGATGCTCCTGtc < 2:1742709/100‑3 ggAATCACTTCCTGCCGCGCACCAGCGTTATCATAAAATTTCAGTGCACGAGGCGGGAAACGGTCCTGATTCGCCAGGCATCGTGTTGATGCTCCTGGCG < 1:2551827/98‑1 GCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGGCATCGTGTTGATGCTCCTGGCG < 2:588859/100‑1 GCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGGCATCGTGTTGATGCTCCTGGCG < 1:1443421/100‑1 CAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGGCATCGTGTTGATGCTCCTGGCGA < 1:1612793/100‑1 ATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGGCATCGTGTTGATGCTCCTGGCGAAT < 1:2262095/100‑1 ATCACTTCCTGCCGCCCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGGCATCGTGTTGATGCTCCTGGCGAAT < 1:898396/100‑1 CACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGGCATCGTGTTGATGCTCCTGGCGAATCA < 1:2471814/100‑1 TCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCTGGAAACGGTCCTGATTCGCCAGGCATCGTGTTGATGCTCCTGGCGAATCAG < 1:1122944/97‑1 GCCAGGCATCGTGTTGATGCTCCTGGCGAATCAGGACCGTTTCCCGCTTCGTGCACTGAAATTTTATGATAACGATGGTGCGCGGCAGGAAGTGATTGCC < 2:168988/100‑1 CCAGGCATCGTGTTGATGCTCCTGGCGAATCAGGACCGTTTCCCGCTTCGTGCACTGAAATTTTATGATAACGATGGTGCGCGGCAGGAAGTGATTGCCn < 2:1386127/100‑2 CCAGGCATCGTGTTGATGCTCCTGGCGAATCAGGACCGTTTCCCGCTTCGTGCACTGAAATTTTATGATAACGATGGTGCGCGGCAGGAAGTGATTGCCG > 1:2249951/1‑100 CCAGGCATCGTGTTGATGCTCCTGGCGAATCAGGACCGTTTCCCGCTTCGTGCACTGAAATTTTATGATAACGATGGTGCGCGGCAGGAAGTGATTGCCG < 1:1296774/100‑1 CCAGGCATCGTGTTGATGCTCCTGGCGAATCAGGACCGTTTCCCGCTTCGTGCACTGAAATTTTATGATAACGATGGTGCGCGGCAGGAAGTGATTGCCG < 2:715026/100‑1 CAGGCATCGTGTTGATGCTCCTGGCGAATCAGGACCGTTTCCCGCTTCGTGCACTGAAATTTTATGATAACGATGGTGCGCGGCAGGAAGTGATTGCCGA < 2:2041543/100‑1 CAGGCATCGTGTTGATGCTCCTGGCGAATCAGGACCGTTTCCCGCTTCGTGCACTGAAATTTTATGATAACGATGGTGCGCGGCAGGAAGTGATTGCCGA < 1:1639865/100‑1 GCATCGTGTTGATGCTCCTGGCGAATCAGGACCGTTTCCCGCTTCGTGCACTGAAATTTTATGATAACGATGGTGCGCGGCAGGAAGTGATTGCCGAAGC > 1:1195407/1‑100 TTCTTTAAGGATGACTTTACAGGCTTCGGCAATCACTTCCTGCCGCGCACCATCGTTATCATAAAATTTCAGTGCACGAAGCGGGAAACGGTCCTGATTCGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3861814‑3861919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaggCATCGTGTTGATGCTCCTGGCGAATCAGGACCGTTTCCCGCTTCGTGCACTGAAATTTTATGATAACGATGGTGCGCGGCAGGAAGTGATTGCCGAAGC < NC_000913/3861934‑3861836 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |