| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4386018 = | NA (NA) | 8 (0.090) | 6/164 | NT | NA | coding (315/315 nt) | yjeO | inner membrane protein |
| ? | NC_000913 | 4386040 = | NA (NA) | intergenic (+22/+7) | yjeO/mscM | inner membrane protein/mechanosensitive channel protein, miniconductance | |||||
CCTCAACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTcacaaac‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4386116‑4386018‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGGCTTTCCAGACGCATCTGGAAGGGCGGGAA > NC_000913/4386040‑4386145 CCTCAACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTC < 2:359421/100‑1CCTCAACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTC < 1:1335302/100‑1 CTCAACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCA > 2:79359/1‑100 CTCAACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCA < 2:1669876/100‑1 CTCAACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCA > 1:2542624/1‑100 CTCAACGGTAAACAAACGGGGAAAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGATCA > 1:884496/1‑100 TCAACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCAC > 2:155763/1‑100 TCAACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCAC < 2:1218331/100‑1 CAACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCACA > 1:1615490/1‑100 CAACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCACA < 2:1910295/100‑1 AACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCACA < 2:1890481/99‑1 ACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAA > 2:712976/1‑100 ACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAA > 1:824264/1‑100 ACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAA < 2:1996860/100‑1 ACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAA > 2:1490533/1‑100 ACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAA < 2:1510254/100‑1 CGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAAC < 1:182343/100‑1 CGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAAC < 1:1455465/100‑1 GGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTC > 1:2105774/1‑99 TTTGTATTTTTTTGTGCCGGATGAACCAATCCGGCTCACAAACTTACAAACTTCCCGCCTGACGACCTTTCCCCGCAGACTTCAGCGTTCTCCCCGTTTG > 1:5936/1‑100 AGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACC > 1:1931714/1‑100 TTTGTGTGCCGGATGAACCAATCCGGCTCACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCG > 1:2290626/1‑99 TGTGTGCCGGATGAACCAATCCGGCTCACAAACTTACAAACTTCCCACCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGCTTGTTTACCGTTG > 2:741228/1‑100 GTGCCGGATGAACCAATCCGGCTCACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGG > 2:791682/1‑100 GTGCCGGATGAACCAATCCGGCTCACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGG > 1:152781/1‑100 GTGCCGGATGAACCAATCCGGCACACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGG > 2:335472/1‑100 GGCTCACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGGCTTTCCAGACGCATCTGGA > 1:1802121/1‑100 CACAAACTTTCAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGGCTTTCCAGACGCATCTGGAAGGG < 2:892701/100‑1 CACAAACTTACAAACTTCCCGCCTGACGACCTTTTCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGGCTTTCCAGACGCATCTGGAAGG < 1:945472/99‑1 CACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGGCTTTCCAGATGCGTCTGGAAagc < 2:739117/100‑4 ACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGGCTTTCCAGATGCGTCTGGAAagcc < 1:123874/100‑5 CAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGGCTTTCCAGACGCATCTGGAAGGGCG > 2:2294520/1‑100 CAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGGCTTTCCAGACGCATCTGGAAGGGCG > 1:1091378/1‑100 ACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGGCTTTCCAGACGCATCTGGAAGGGCGGGA < 2:561071/100‑1 CTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGGCTTTCCAGACGCATCTGGAAGGGCGGGAA < 1:872519/100‑1 CCTCAACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAAGTTTGTGTGCCGGATGAACCAATCCGGCTcacaaac‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4386116‑4386018‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACAAACTTACAAACTTCCCGCCTGACGACCTTTGCCCGCAGACGTCAGCGTTCTCCCCGTTTGTTTACCGTTGAGGCTTTCCAGACGCATCTGGAAGGGCGGGAA > NC_000913/4386040‑4386145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |