| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4475322 = | 100 (1.090) | 16 (0.200) | 6/158 | NT | 16.2% | intergenic (+8/‑115) | tabA/yjgL | biofilm modulator regulated by toxins; DUF386 family protein, cupin superfamily protein/SopA‑central‑domain‑like hexapeptide repeat protein |
| ? | NC_000913 | 4475352 = | 77 (0.950) | intergenic (+38/‑85) | tabA/yjgL | biofilm modulator regulated by toxins; DUF386 family protein, cupin superfamily protein/SopA‑central‑domain‑like hexapeptide repeat protein | |||||
TCCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4475429‑4475322‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttacggcgaGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAAATATC > NC_000913/4475352‑4475450 TCCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATT < 2:2393282/100‑1TCCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATT > 2:1670793/1‑100 ccaTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCATTTTACAAACTCACCGTAAACCTTAAGTTATTT > 1:757838/4‑100 CCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCACAAAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATT > 1:2092128/1‑100 CCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTT > 2:1972687/1‑100 CTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTA > 1:2351863/1‑100 tgcGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTA < 1:1542432/95‑1 TGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACG > 1:1546415/1‑100 TGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTAC > 1:2259950/1‑99 GAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGG < 2:1441354/100‑1 GAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTAC > 2:1585255/1‑98 AGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGC < 2:711483/100‑1 AGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGC < 2:1238595/100‑1 GTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGCG > 2:2480977/1‑100 GTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGCG > 1:2119206/1‑100 GTGAATAAGAACGACTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCACTTTTCACAAACTCACGGTAACCCCTGAGTTATTTACGGC > 1:157212/1‑99 GAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTT > 1:2091985/1‑92 TCACAAACTCGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTT > 2:1310634/1‑100 AACTCGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTAT > 1:1520938/1‑100 AACTCGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATCTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTAT > 1:1942612/1‑100 ACTCGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATT > 2:1247208/1‑100 CTCGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGATCGTTTATTGATATTTTTTTGTGAGTAAAATTTGTAATGTTTAGACGTTCTTATTC > 1:2129291/1‑100 CTCGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTC > 2:1962391/1‑100 CTCGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTGTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTC > 1:1818112/1‑100 TCGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCA > 1:1367393/1‑100 CGCCGTAAACCTTGAGTTATTTACGGGGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCAC > 2:1581761/1‑100 CGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCAC > 2:2313775/1‑100 CGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCAC > 2:68860/1‑100 CGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCAC > 2:598335/1‑100 CGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCAC > 1:1468316/1‑100 CGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCAC > 1:2167511/1‑100 CGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCAC > 2:1871993/1‑100 CGCCGTAAACCTTGAGTTATTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTCTGAGTAAAATTTGTAATGCTTAGACGGTCTTATTC > 1:636891/1‑98 tgTACGGCTAGTTTGTGAAAAGAGCGTTTTTTGATAGTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAG < 1:1739084/98‑1 TACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCA < 2:28163/100‑1 ACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAA > 2:1342137/1‑100 ACGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAA > 2:1299299/1‑100 CGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAA < 2:1449960/100‑1 CGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAA < 2:210024/100‑1 CGGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAA > 1:2373946/1‑100 GGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTTTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAAA > 1:1857719/1‑100 GGCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAAA < 2:1182224/100‑1 GGCGAGTTTGTGAAAAGAGCGTTTTTTGATA‑TTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAAA > 1:1393222/1‑99 GGCGAGTTTGTGAAAAGAGCGTTTTTTGATA‑TTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGAAAAA > 1:1394248/1‑99 GCGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGATCGTCATGAGCAAAAT > 1:1946342/1‑100 CGAGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCAATCAAGGAGTTCGTCATGAGCAAAA > 2:562042/1‑98 AGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAAATATC < 2:2305479/100‑1 TCCTTGAGTGAATAAGAACGTCTAAGCATTACAAATTTTACTCAC‑AAAAAAATATCAAAAAACGCTCTTTTCACAAACTCGCCGTAAACCTTGAGTTATTTACGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4475429‑4475322‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttacggcgaGTTTGTGAAAAGAGCGTTTTTTGATATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAAGGAGTTCGTCATGAGCAAAATATC > NC_000913/4475352‑4475450 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |