| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4624213 = | 100 (1.090) | 7 (0.080) | 5/168 | NT | 7.7% | coding (577/645 nt) | ytjB | SMP_2 family putative membrane‑anchored periplasmic protein |
| ? | NC_000913 | 4624245 = | 73 (0.840) | coding (545/645 nt) | ytjB | SMP_2 family putative membrane‑anchored periplasmic protein | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
GGATAACACCACTAACATTTTACGCCTGATGTTGCTGCTCTCACTGGCAATCGGTGTAGTGCTGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4624316‑4624213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTATCCACCTGTTGGGCTTCGGTGGCGAGCGT > NC_000913/4624245‑4624342 gtATAACACCACTAACATTTTACGCCTGATGTTGCTGCTCTCACTGGCAATCGGTGTAGTGCTGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGG > 2:1751892/3‑100GGATAACACCACTAACATTTTACGCCTGATGTTGCTGCTCTCACTGGCAATCGGTGTAGTGCTGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGG > 1:1254803/1‑100GGATAACACCACTAACATTTTACGCCTGATGTTGCTGCTCTCACTGGCAATCGGTGTAGTGCTGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGG > 2:1982651/1‑100 ATAACACCACTAACATTTTACGCCTGATGTTGCTGCTCTCACTGGCAATCGGTGTAGTGCTGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGGCA > 2:747625/1‑100 ATAACACCACTAACATTTTACGCCTGATGTTGCTGCTCTCACTGGCAATCGGTGTAGTGCTGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGGCA < 2:635198/100‑1 TAACATCACTAACATTTTAAGCCTTATGTTGCTGCTCTCACTGGCAATCGGTGTAGTGCTGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGGCAG < 1:2251379/100‑1 TAACACCACTAACATTTTACGCCTGATGTTGCTGCTCTCACTGGCAATCGGTGTAGTGCTGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGGCAG < 2:506971/100‑1 TAACACCACTAACATTTTACGCCTGATGTTGCTGCTCTCACTGGCAATCGGTGTAGTGCTGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGGCAG > 2:2279016/1‑100 TAACACCACTAACATTTTACGCCTGATGTTGCTGCTCTCACTGGCAATCGGTGTAGTGCTGACACGCACGCTGCTACAGGGTAAACGCACCAGCTGGCAG > 2:2333807/1‑100 TAACACCACTAACATTCTACGCCTGATGTTGCTGCTCTCACTGGCAATCGGTGTAGTGCTGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGGCAG < 1:1165050/100‑1 TGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGT > 1:2183891/1‑100 TGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGT > 1:490444/1‑100 CCCGCACGCTGCTACAGGGTAAACGCACCCGCTGGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAG > 2:1057561/1‑100 CCCGCACGCTGCTACAGGGTAAACGCAATCGCTGGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCCACATCAGGCGTAAAATGTTAG > 1:1296444/1‑100 CCGCACGCTGCTACAGGGTAAACGCACCCGCTGGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGT > 2:1172606/1‑100 CGCACGCTGCTACAGGGTAAACGCACCCGCTGGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGTG > 1:1582974/1‑100 GCACGCTGCTACAGGGTAAACGCACCCGCTGGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGTGG > 2:2407926/1‑100 GCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTATCCACCTGTTGGGCTTCGGTGGCGAG < 1:2015030/100‑1 GCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTATCCACCTGTTGGGCTTCGGTGGCGAG < 1:2008346/100‑1 GCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTATCCACCTGTTGGGCTTCGGTGGCGAG > 1:1892147/1‑100 CAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTATCCACCTGTTGGGCTTCGGTGGCGAGC < 1:1470501/100‑1 AGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTATCCACCTGTTGGGCTTCGGTGGCGAGCG < 2:1783615/100‑1 AGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTATCCACCTGTTGGGCTTCGGTGGCGAGCG > 2:688980/1‑100 GCGTGCGGGTCAGCACTACGCCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTATCCACCTGTTGGGCTTCGGTGGCGAGCGT < 1:1753136/100‑1 GGATAACACCACTAACATTTTACGCCTGATGTTGCTGCTCTCACTGGCAATCGGTGTAGTGCTGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4624316‑4624213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAGGCGTAAAATGTTAGTGGTGTTATCCACCTGTTGGGCTTCGGTGGCGAGCGT > NC_000913/4624245‑4624342 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |