New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 762891NA (NA)9 (0.110) 8/164 NT NA noncoding (130/167 nt) REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 = 762924 NA (NA)noncoding (163/167 nt) REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 126 total aligned reads displayed.

CGGCAATTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACG  >  NC_000913/762792‑762989
                                                                                                   |                                                                                                  
cGGCAATTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGAt                                                                                                    >  2:2088173/1‑100 (MQ=255)
cGGCAATTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGAt                                                                                                    >  2:1606525/1‑100 (MQ=255)
cGGCAATTGAAGCCTGATGCAACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGAt                                                                                                    >  1:1587291/1‑100 (MQ=255)
 ggCAATTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGTACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATg                                                                                                   >  2:741797‑M1/1‑99 (MQ=255)
   cAATTGAAGCCTGATGCGACGCTTACGCGTCTTATCAGGCCTACTGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGGTgcc                                                                                                 >  1:1157308‑M1/1‑97 (MQ=255)
   cAATTGAAGCCTAATGCGACCCTGACGCGTCTTATCAGGCCTACGGGCCCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcc                                                                                                 <  1:1498182‑M1/100‑4 (MQ=255)
    aaTTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcct                                                                                                <  1:653370‑M1/100‑5 (MQ=255)
     aTTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcctg                                                                                               >  1:1009294‑M1/1‑95 (MQ=255)
      ttGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcctga                                                                                              >  2:1398574‑M1/1‑94 (MQ=255)
        gAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGAtg                                                                                            <  1:1754771/100‑1 (MQ=255)
        gAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGAtg                                                                                            >  2:1643331/1‑100 (MQ=255)
        gAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGAtg                                                                                            <  2:1839469/100‑1 (MQ=255)
         aaGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGAtgt                                                                                           <  2:887588/100‑1 (MQ=255)
           gCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGa                                                                                         >  1:236852/1‑100 (MQ=255)
           gCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGa                                                                                         <  1:2292042/100‑1 (MQ=255)
           gCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGa                                                                                         >  2:1624635/1‑100 (MQ=255)
            ccTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGAc                                                                                        >  2:1142077/1‑100 (MQ=255)
             cTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACg                                                                                       <  2:2355097/100‑1 (MQ=255)
              tGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGTGCCGCATCCGACAAGCGATGCCTGATGTGACGt                                                                                      >  1:411958/1‑100 (MQ=255)
              tGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGt                                                                                      <  2:2428494/100‑1 (MQ=255)
              tGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGt                                                                                      >  2:1836942/1‑100 (MQ=255)
                aTGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGttt                                                                                    <  1:543917/100‑1 (MQ=255)
                 tGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGGCTGATGTGACGTTTa                                                                                   >  2:2557871/1‑100 (MQ=255)
                  gCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTaa                                                                                  >  2:385819/1‑100 (MQ=255)
                   cGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAAc                                                                                 >  1:197285/1‑100 (MQ=255)
                   cGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAAc                                                                                 >  2:421485/1‑100 (MQ=255)
                   cGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAAc                                                                                 >  1:1275358/1‑100 (MQ=255)
                     aCGCTGCCGCGTCTTATCAGGCCTCCGGGACCACCACTGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACCAGGGATGCCTGATGTGACGTTTAACgt                                                                               >  1:1109040/1‑100 (MQ=37)
                      cGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACgtg                                                                              >  2:1808705/1‑100 (MQ=255)
                        cTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTc                                                                            <  2:1104038/100‑1 (MQ=255)
                          gACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCtt                                                                          >  1:1276252/1‑100 (MQ=255)
                              cgTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGGGACGTTTAACGTGTCTTATCA                                                                      >  1:1033898‑M2/1‑100 (MQ=255)
                                tCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcctgataagacacgttaaacgtcacatcagg                                                                    <  2:1914534‑M1/100‑33 (MQ=255)
                                 cTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGC                                                                   <  2:1376289‑M2/100‑1 (MQ=255)
                                 cTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGC                                                                   <  2:1856425‑M2/100‑1 (MQ=255)
                                  ttATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGcc                                                                  <  2:1663803/100‑1 (MQ=255)
                                    aTCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcctgataagacacgttaaacgtcacatcaggcatc                                                                <  2:605732‑M1/100‑37 (MQ=255)
                                    aTCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTa                                                                >  2:1243576/1‑100 (MQ=255)
                                    aTCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTa                                                                >  1:793169/1‑100 (MQ=255)
                                     ttccgatctcGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTAc                                                               <  2:1034756/91‑1 (MQ=255)
                                     tCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcctgataagacacgttaaacgtcacattaggcatcg                                                               <  1:1952224‑M1/100‑38 (MQ=255)
                                     tCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcctgataagacacgttaaacgtcacatcaggcatcg                                                               <  2:974874‑M1/100‑38 (MQ=255)
                                      cAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcctgataagacacgttaaacgtcacatcaggcatcgc                                                              <  2:783914‑M1/100‑39 (MQ=255)
                                       aGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcctgataagacacgttaaacgtcacatcaggcatcgct                                                             <  2:143372‑M1/100‑40 (MQ=255)
                                        ggCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATgcctgataagacacgttaaacgtcacatcaggcatcgctt                                                            <  1:1855369‑M1/100‑41 (MQ=255)
                                          ccTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTg                                                          >  2:714446/1‑100 (MQ=255)
                                          ccTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTg                                                          >  2:1666044/1‑100 (MQ=255)
                                              cGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCg                                                      <  1:421483/100‑1 (MQ=255)
                                              cGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCg                                                      >  1:2080719/1‑100 (MQ=255)
                                                ggACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGAc                                                    <  2:782010/100‑1 (MQ=255)
                                                ggACCACCAATGTAGGTCAGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTTACGTTTAACGTGTCTTATTAGGCCTACGGGTGACCg                                                      <  1:247627/98‑1 (MQ=255)
                                                 gACCACCAATGTAGGTCGGATAAGGCGCAAGCTCCGCATCCGACAAGCGGTgcctgataagacacgttaaacgtcacatcaggcatcgcttgtcg                                                        <  1:2510396‑M1/95‑45 (MQ=255)
                                                   ccaccaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACact                                                 >  1:1572775/1‑98 (MQ=255)
                                                   ccaccaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAAt                                                 >  1:1179504/1‑100 (MQ=255)
                                                   ccaccaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAAt                                                 <  1:2542321/100‑1 (MQ=255)
                                                         aTGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCgg                                           <  2:1537816/100‑1 (MQ=255)
                                                         aTGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCg                                            <  1:1402321/99‑1 (MQ=255)
                                                             aGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGc                                       <  1:2409604/100‑1 (MQ=255)
                                                             aGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGc                                       <  1:1027793/100‑1 (MQ=255)
                                                              ggTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGccccctcata                                      >  2:2017764/1‑93 (MQ=255)
                                                              ggTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCg                                      <  2:1115516/100‑1 (MQ=255)
                                                              ggTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCg                                      >  1:441343/1‑100 (MQ=255)
                                                              ggTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCg                                      >  1:2243669/1‑100 (MQ=255)
                                                               gTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGa                                     >  2:1577368/1‑100 (MQ=255)
                                                                tCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGAt                                    >  2:1248711/1‑100 (MQ=255)
                                                                atctaTAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGAt                                    <  1:2058739/96‑1 (MQ=255)
                                                                 ccgatctggCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATa                                   <  2:800095/93‑1 (MQ=255)
                                                                  ggATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATAc                                  <  2:2364117/100‑1 (MQ=255)
                                                                   gATAAGGCGCAAGCGCCGCATCCGACAAGCGTTGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACg                                 <  1:2364206/100‑1 (MQ=255)
                                                                    aTAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATaaat                                >  2:2058752/1‑97 (MQ=255)
                                                                     tAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTATGGGTGACCGACAATGTCCGGAAGCGATAAGa                                >  1:809947/1‑99 (MQ=255)
                                                                       aGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAat                             >  1:566204/1‑100 (MQ=255)
                                                                        ggCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCGCGGAAGCGATACGAAata                            >  1:101529/1‑100 (MQ=255)
                                                                        ggCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATaagatcgg                            >  1:800092/1‑93 (MQ=255)
                                                                        ggCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAata                            >  1:1118053/1‑100 (MQ=255)
                                                                         gcgcAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCGCGGAAGCGATACGAAatat                           >  1:1877997/1‑100 (MQ=255)
                                                                            cAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCg                        <  2:123741/100‑1 (MQ=255)
                                                                             aaGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCGTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCgg                       <  1:548255/100‑1 (MQ=255)
                                                                              aGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGt                      <  1:2246525/100‑1 (MQ=255)
                                                                               gcgcCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGCCAATGCCCGGAAGCGATACGAAATATTCGGTc                     >  1:2059342/1‑100 (MQ=255)
                                                                               gcgcCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTc                     <  2:393036/100‑1 (MQ=255)
                                                                                 gccgcATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCt                    <  2:2142923/99‑1 (MQ=255)
                                                                                  ccgcATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTAc                  <  1:2279788/100‑1 (MQ=255)
                                                                                   cgcATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGCAATATTCGGTCTACg                 >  2:2550574/1‑100 (MQ=255)
                                                                                    gcATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACgg                <  2:2421215/100‑1 (MQ=255)
                                                                                       tCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGttt             <  2:1702679/100‑1 (MQ=255)
                                                                                        ccGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTa            >  2:1240017/1‑100 (MQ=255)
                                                                                        ccGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTa            <  2:2201725/100‑1 (MQ=255)
                                                                                         cGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCaccgcttgtcggatgcggagcttgcgccttatccgacctacattggtggtc                <  1:2510396‑M2/95‑52 (MQ=255)
                                                                                         cGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTaa           >  1:2294071/1‑100 (MQ=255)
                                                                                           aCAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTaaaa         <  1:1613339/100‑1 (MQ=255)
                                                                                            cAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggc        <  1:1807702‑M2/100‑60 (MQ=255)
                                                                                            cAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAg        <  1:1808695/100‑1 (MQ=255)
                                                                                             aaGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGGCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAAGATTCGGTCTACGGTTTAAAAg        <  1:2582973/99‑1 (MQ=255)
                                                                                             aaGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcc       <  1:1855369‑M2/100‑61 (MQ=255)
                                                                                                cGATGCCTAATGTGACGTTTAACGTGTCTTATCAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctga    <  1:1952224‑M2/100‑64 (MQ=255)
                                                                                                 gATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgat   <  2:605732‑M2/100‑65 (MQ=255)
                                                                                                 gATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAAc   >  2:1213219/1‑100 (MQ=255)
                                                                                                  aTGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAAcn  <  2:529077/100‑2 (MQ=255)
                                                                                                  aTGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAAc   <  2:1981264/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
CGGCAATTGAAGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACG  >  NC_000913/762792‑762989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.