New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2835099 =NA (NA)13 (0.150) 5/164 NT NA noncoding (33/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3650712 = NA (NA)noncoding (1/100 nt) RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 119 total aligned reads displayed.

TCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCG  >  NC_000913/2835000‑2835195
                                                                                                   |                                                                                                
tCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGAcc                                                                                                  <  1:138416/100‑1 (MQ=255)
  ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                                                <  2:8646/100‑1 (MQ=255)
  ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                                                >  2:294123/1‑100 (MQ=255)
  ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                                                >  2:1940482/1‑100 (MQ=255)
  ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                                                >  1:1418986/1‑100 (MQ=255)
  ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                                                >  1:867769/1‑100 (MQ=255)
    aTGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACg                                                                                              <  2:1631734/100‑1 (MQ=255)
      taaaGAGGCAGTGGTAGTGGTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACggg                                                                                            <  1:476685/99‑1 (MQ=37)
      gAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACggg                                                                                            >  1:428332/1‑100 (MQ=255)
       aaaGAGGCATTTTGATTGTTGAAACCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACtgg                                                                                            <  1:312527/99‑1 (MQ=255)
       aaaGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACgggg                                                                                           >  2:2090276/1‑100 (MQ=255)
        aaGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGa                                                                                          >  1:2298739/1‑100 (MQ=255)
          gagGCATTTGGATTGTTGAAAACATTGTCAATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACg                                                                                        <  1:2206376/100‑1 (MQ=255)
            ggCATTTGGATTGTTGAAAACATTGCCGATGTATGGGGGCTACTGTGCCTAGCATGTCGGGTGCGACGCTGGCGCGTCTTATCCGACCTACGGGGCCg                                                                                        <  1:2484120/98‑1 (MQ=37)
             gCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAt                                                                                     <  2:1366488/100‑1 (MQ=255)
                tttGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtgtg                                                                                  >  1:2415709/1‑100 (MQ=255)
                  tGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTa                                                                                >  2:2522267/1‑100 (MQ=255)
                    gATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAgg                                                                              >  1:765906/1‑100 (MQ=255)
                    gATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAgg                                                                              >  1:184203/1‑100 (MQ=255)
                     aTTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGc                                                                             >  1:906672/1‑100 (MQ=255)
                      ttgttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGGCGCTGGCGCGTCTTATCCGACCTGCGGGGACGCATGTGTAGGcc                                                                            <  1:688314/100‑1 (MQ=255)
                        gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCgg                                                                          >  2:1500087/1‑100 (MQ=255)
                          cttccgatctGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGAt                                                                        <  1:1036818/91‑1 (MQ=255)
                           gAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATa                                                                       >  1:2114269/1‑100 (MQ=255)
                             aaaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAg                                                                     >  1:1670732/1‑100 (MQ=255)
                              aaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAgg                                                                    <  2:1234192/100‑1 (MQ=255)
                              aaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAgg                                                                    <  1:2014896/100‑1 (MQ=255)
                                cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                                                  <  1:1474271/100‑1 (MQ=255)
                                cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                                                  <  2:16052/100‑1 (MQ=255)
                                cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                                                  <  1:2031764/100‑1 (MQ=255)
                                cATTGCCGATGTAGGTAAGCTACTGTGCCTAAAATGTCAGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAAGCCGGATAAGGCg                                                                  >  1:398091/1‑100 (MQ=25)
                                    gCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATagatcggaag                                                              >  2:1036821/1‑91 (MQ=255)
                                    gCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTa                                                              >  2:1902409/1‑100 (MQ=255)
                                     ccGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTCTCCGACATACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTa                                                              >  1:2014582/1‑99 (MQ=255)
                                      cGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcg                                                            >  2:1592418/1‑100 (MQ=255)
                                       gATGTGGGTGGGCTACTGTGCCTAAAATGTTGTATGCGACGGTGGGGCGTCTTATCCGACTTACGGGGACGCATGTGTAGGCCGGATAAGGCGttt                                                               <  1:2207173/96‑1 (MQ=25)
                                       gATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTCTAGGCCGGATAAGGCGTTTAcgc                                                           <  2:2194396/100‑1 (MQ=255)
                                        aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                          <  1:2254228/100‑1 (MQ=255)
                                         tGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgccg                                                         >  2:248195/1‑100 (MQ=255)
                                            aGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCAt                                                      >  2:1110456/1‑100 (MQ=255)
                                            aGGTGGGCTACTGTGCCTAAAATGACGGATGCGACGCTGGCGCGGCTTATCCGACCTACGGAGACGCAAGAATAAGCCAGATAAAGCGTTTAcgcc                                                          >  1:1486458/1‑96 (MQ=21)
                                             ggTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATc                                                     <  1:2053206/100‑1 (MQ=255)
                                             ggTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATc                                                     >  1:36285/1‑100 (MQ=255)
                                             ggTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATc                                                     >  2:2255909/1‑100 (MQ=255)
                                              gTGGGCTACTGTGCCTAACATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                    <  2:2184684/100‑1 (MQ=255)
                                              gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                    >  2:555352/1‑100 (MQ=255)
                                              gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                    <  2:1416949/100‑1 (MQ=255)
                                               tGGGCTACTGTGCCTAAAATGTCGGATGCTACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATGCGGCGTAAAcgccttatccg                                                   <  2:1515053/100‑8 (MQ=21)
                                                gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATGCGGCGTAAACGCCTTATCCgg                                                  <  2:684942/100‑1 (MQ=21)
                                                gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                                                  <  2:867772/100‑1 (MQ=255)
                                                gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                                                  <  2:1035480/100‑1 (MQ=255)
                                                gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                                                  >  2:806606/1‑100 (MQ=255)
                                                gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                                                  >  1:916735/1‑100 (MQ=255)
                                                 ggCTACTGTGTCTAAAATGTCTGATGTGACGCTGTCGCGTCTTATCCGACCTACGAGGACGCATTTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGc                                                 <  2:193027/100‑1 (MQ=12)
                                                 ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                 <  1:1141866/100‑1 (MQ=255)
                                                 ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                 >  1:1024388/1‑100 (MQ=255)
                                                   cTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGc                                                 <  2:718121/98‑1 (MQ=18)
                                                   cTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCaa                                               >  2:1925292/1‑100 (MQ=255)
                                                   cTACTGTGCCGAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCaa                                               <  1:2155048/100‑1 (MQ=255)
                                                     aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                             <  1:2543590/100‑1 (MQ=255)
                                                        gtgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg                                          <  2:794826/100‑1 (MQ=255)
                                                          gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc                                        >  2:144333/1‑100 (MQ=255)
                                                           ccTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                       <  2:1096716/100‑1 (MQ=255)
                                                           ccTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                       >  1:1245487/1‑100 (MQ=255)
                                                            cTAAAACGCCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                       <  1:447911/99‑1 (MQ=255)
                                                              aaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa                                    <  1:916648/100‑1 (MQ=255)
                                                                 aggtcggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGc                                 <  1:1336795‑M1/66‑1 (MQ=255)
                                                                 aTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGc                                 <  1:314005/100‑1 (MQ=255)
                                                                  tGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                <  1:585792/100‑1 (MQ=255)
                                                                  tGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                <  1:1500078/100‑1 (MQ=255)
                                                                  ggtcggctaagacgcgccagagtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                <  1:441425‑M1/67‑1 (MQ=255)
                                                                  ggtcggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                <  2:2350796‑M1/67‑1 (MQ=255)
                                                                    tCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAac                              >  2:2271356/1‑100 (MQ=255)
                                                                    tCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAac                              <  1:806603/100‑1 (MQ=255)
                                                                      ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                            <  2:619237‑M1/71‑1 (MQ=255)
                                                                      ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                            <  1:1776901‑M1/71‑1 (MQ=255)
                                                                      ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                            <  2:32656‑M1/71‑1 (MQ=255)
                                                                      ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                            <  1:2551511‑M1/71‑1 (MQ=255)
                                                                       gataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACg                           <  2:1969935‑M1/72‑1 (MQ=255)
                                                                       gataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACg                           <  1:1605831‑M1/72‑1 (MQ=255)
                                                                         tGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtt                         <  1:1885324/100‑1 (MQ=255)
                                                                           cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtttt                       >  1:589043/1‑100 (MQ=255)
                                                                           cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGttt                        >  1:2122177/1‑99 (MQ=255)
                                                                            gACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTa                      >  2:342810/1‑100 (MQ=255)
                                                                              cgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                    >  2:1776910‑M1/22‑100 (MQ=255)
                                                                              cGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCGTCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                    >  1:1105100/1‑100 (MQ=255)
                                                                                cTGGCGCGTATCTTCCGATCTACGGGGATGCATGTGTCGTCCGGCTAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCg                  <  1:416482/100‑1 (MQ=25)
                                                                                 tGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGt                 >  2:1580815/1‑100 (MQ=255)
                                                                                   gcgcGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTc               <  2:428334/100‑1 (MQ=255)
                                                                                    cgcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCt              >  1:842133/1‑100 (MQ=255)
                                                                                     gcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTg             <  1:1239393/100‑1 (MQ=255)
                                                                                     gcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTg             <  2:2004836/100‑1 (MQ=255)
                                                                                        tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc          <  2:1072780/100‑1 (MQ=255)
                                                                                         cTTATCCGGCCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACt         <  2:2510123/100‑1 (MQ=255)
                                                                                         cTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACt         >  2:2101882/1‑100 (MQ=255)
                                                                                         cTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACt         >  2:1236611/1‑100 (MQ=255)
                                                                                         cTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCAAAATGCAACACGTTTTATCCGTTCTGGa           >  1:1818508/1‑98 (MQ=255)
                                                                                           tATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTc       <  1:2255894/100‑1 (MQ=255)
                                                                                            atccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCa      <  2:517457‑M1/93‑1 (MQ=255)
                                                                                                gacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCg  <  2:2021893‑M1/97‑1 (MQ=255)
                                                                                                   |                                                                                                
TCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCG  >  NC_000913/2835000‑2835195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.