New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2837465 =NA (NA)15 (0.180) 8/162 NT NA noncoding (1/27 nt) REP196 (repetitive extragenic palindromic) element; contains 1 REP sequences REP196 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2837492 = NA (NA)intergenic (‑67/+86) hypF/hydN carbamoyl phosphate phosphatase and [NiFe] hydrogenase maturation protein/formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit

Only 100 of 133 total aligned reads displayed.

GACGCCCTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACA  >  NC_000913/2837366‑2837563
                                                                                                   |                                                                                                  
gACGCCCTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTg                                                                                                    <  2:1704752/100‑1 (MQ=255)
 ctgatgttctaaaaatcttacagaactgttctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGc                                                                                                   >  1:314577‑M1/99‑100 (MQ=255)
  tgatgttctaaaaatcttacagaactgttctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGcc                                                                                                  >  2:2285834‑M1/98‑100 (MQ=255)
  tgatgttctaaaaatcttacagaactgttctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGcc                                                                                                  >  2:1800470‑M1/98‑100 (MQ=255)
  cGCCCTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGcc                                                                                                  <  2:847159/100‑1 (MQ=255)
  cGCCCTGCACTTTGCCACGAATACGCAGTCGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGcc                                                                                                  <  1:1553548/100‑1 (MQ=255)
    cccTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCgg                                                                                                <  2:1035804/100‑1 (MQ=255)
    cccTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCgg                                                                                                <  2:1294065/100‑1 (MQ=255)
    cccTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCgg                                                                                                >  2:508634/1‑100 (MQ=255)
    cccTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCgg                                                                                                <  2:2587992/100‑1 (MQ=255)
    cccTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCg                                                                                                 >  1:1721857/1‑99 (MQ=255)
     tgttctaaaaatcttacagaactgttctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGa                                                                                               <  2:378297‑M1/6‑1 (MQ=255)
     tgttctaaaaatcttacagaactgttctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGa                                                                                               >  2:2567258‑M1/95‑100 (MQ=255)
      cTGCACTTTGCCACGAATACGCAGTTGTACACCGCAAGATGTGTTTTTTGCCAGTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCgg                                                                                                <  1:1876731/98‑1 (MQ=255)
       ttctaaaaatcttacagaactgttctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGaca                                                                                             >  2:2002019‑M1/93‑100 (MQ=255)
       tGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGaca                                                                                             >  2:2059049/1‑100 (MQ=255)
        gCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGacac                                                                                            <  2:1604982/100‑1 (MQ=255)
         cACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGCTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACg                                                                                           <  2:13804/100‑1 (MQ=255)
           cTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGAc                                                                                         >  1:2305100/1‑100 (MQ=255)
           cTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTCGGTAACGCACCCTGCCGGacagcac                                                                                         >  1:501248/1‑96 (MQ=255)
            tttGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTGATTCCCGCCATCATGAATTGCGTACCCCGACCTGCCGGACACGACa                                                                                        >  1:153701/1‑100 (MQ=255)
                 cACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTTCCGGACACGACAGCGTc                                                                                   >  2:2504203/1‑100 (MQ=255)
                  aCGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCg                                                                                  <  1:2166567/100‑1 (MQ=255)
                  aCGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCg                                                                                  <  1:1425542/100‑1 (MQ=255)
                  aCGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCg                                                                                  <  2:893507/100‑1 (MQ=255)
                    gAATACGCAGTTGGACACCGCAAGATGTGTTTTTTTTTTTTTTTTTTTTCCCGCCATCATGACTAGCGTATCCCGCCCTTCGGGACACGCCAGCGGCGCa                                                                                >  1:576448/1‑100 (MQ=255)
                      aTACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATc                                                                              >  1:1858760/1‑100 (MQ=255)
                       tACGCAGTTGGTCACCGCAAGATGTGTTTTTTGCCATTGGGTTAGTCCCGCCATCATGACAGGCGTAACCCGCCCTGCGGGACACGATAGCGTCGCATc                                                                              <  1:143139/99‑1 (MQ=255)
                       tACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATcc                                                                             >  1:2270179/1‑100 (MQ=255)
                       tACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATcc                                                                             <  1:508632/100‑1 (MQ=255)
                        aCGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCg                                                                            >  2:2341301/1‑100 (MQ=255)
                         actgttctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGACACGACAGCGTCGCATCCgg                                                                           >  1:2469277‑M1/75‑100 (MQ=255)
                         actgttctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGACACGACAGCGTCGCATCCgg                                                                           >  1:1283593‑M1/75‑100 (MQ=255)
                          gCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGTACACGACAGCGTCGCATCCGGc                                                                          <  1:1079634/100‑1 (MQ=255)
                          gCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGc                                                                          <  1:158978/100‑1 (MQ=255)
                          ctgttctggcatcaacggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGACACGACAGCGTCGCATCCGGc                                                                          >  2:2329591‑M1/74‑100 (MQ=255)
                          ctgttctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGACACGACAGCGTCGCATCCGGc                                                                          >  2:1865053‑M1/74‑100 (MQ=255)
                          ctgttctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGACACGACAGCGTCGCATCCGGc                                                                          >  1:1199274‑M1/74‑100 (MQ=255)
                          ctgttctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGACACGACAGCGTCGCATCCGGc                                                                          >  1:1195378‑M1/74‑100 (MQ=255)
                          ctgttctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGACACGACAGCGTCGCATCCGGc                                                                          >  1:880104‑M1/74‑100 (MQ=255)
                          ctgttctggcatcaaaggaatgcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGACACGACAGCGTCGCATCCGGc                                                                          >  2:1479182‑M1/74‑100 (MQ=255)
                          ctgttctggcatcaaaggaatgcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGACACGACAGCGTCGCATCCGGc                                                                          >  1:1130704‑M1/74‑100 (MQ=255)
                           tgttctggcatcaaaggaattcccgtaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGACACGACAGGGTCGCATCCGGCa                                                                         >  1:1601472‑M1/73‑100 (MQ=255)
                            gttctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGACACGACAGCGTCGCATCCGGCAg                                                                        >  2:1146082‑M1/72‑100 (MQ=255)
                             ttctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGACACGACAGCGTCGCATCCGGCAGt                                                                       >  2:1972212‑M1/71‑100 (MQ=255)
                                ggACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcac                                                                    <  2:1258003/100‑1 (MQ=255)
                                 ggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactGCCGGACACGACAGCGTCGCATCCGGCAGTcaca                                                                   <  1:1107665‑M1/34‑1 (MQ=255)
                                 gACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcaca                                                                   >  2:10421/1‑100 (MQ=255)
                                 gACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcaca                                                                   <  2:423990/100‑1 (MQ=255)
                                 gACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTACCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcaca                                                                   >  2:1826396/1‑100 (MQ=255)
                                   cacCGCAAGATGTGAATTTTGACATAGACTTATTCCCGCCATCATGAATTACGTAACCCGACCTGCCGGACACGAAAGCGTTACCTCCGGCAATCACAg                                                                  >  1:281175/1‑99 (MQ=255)
                                        cAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGc                                                            <  2:2337841/100‑1 (MQ=255)
                                        cAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGc                                                            >  2:569339/1‑100 (MQ=255)
                                             tgtgTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAc                                                       >  2:879871/1‑100 (MQ=255)
                                              gtgtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACCCGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAcc                                                      >  1:842114/1‑100 (MQ=255)
                                              gtgtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAcc                                                      <  1:569337/100‑1 (MQ=255)
                                               tgtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAccg                                                     <  1:1235902/100‑1 (MQ=255)
                                               tgtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAccg                                                     <  1:2573304/100‑1 (MQ=255)
                                                  tttttGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAccgccc                                                  >  2:367203/1‑100 (MQ=255)
                                                     ttGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCt                                               >  1:1997579/1‑100 (MQ=255)
                                                        ccATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCTCTCCg                                            >  1:2383159/1‑100 (MQ=255)
                                                        ccATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCg                                            >  2:480318/1‑100 (MQ=255)
                                                        ccATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCg                                            <  2:719406/100‑1 (MQ=255)
                                                        ccATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCg                                            >  1:2210608/1‑100 (MQ=255)
                                                         ccttGAGTTATTCCCGCCATCATGAATTCCGTACCCCGCCCTGCCGGACACGACACCGTCACATCCGACCGTCACCGGCCTCCGCTACCCTCCGCTcc                                             >  1:2364712/3‑98 (MQ=255)
                                                         cATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGt                                           >  2:362948/1‑100 (MQ=255)
                                                         cATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGt                                           <  2:902845/100‑1 (MQ=255)
                                                          aTTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGt                                           >  2:2356901/1‑99 (MQ=255)
                                                           ttGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTAt                                         <  2:2004016/100‑1 (MQ=255)
                                                             gAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTc                                       >  2:2333524/1‑100 (MQ=255)
                                                             gAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTc                                       >  2:822362/1‑100 (MQ=255)
                                                             gAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCAGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCTGCGATACCGCCCGCTCCGTATTc                                       >  2:1280499/1‑100 (MQ=255)
                                                               gTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTa                                     >  2:2150720/1‑100 (MQ=255)
                                                               gTTATGCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCt                                      <  1:2392647/99‑1 (MQ=255)
                                                                  aTTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGa                                  <  2:853723/100‑1 (MQ=255)
                                                                   ttCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGaa                                 <  1:530118/100‑1 (MQ=255)
                                                                   ttCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGaa                                 <  1:2206337/100‑1 (MQ=255)
                                                                    tCCCGCCATCATGAATTGCGTAACCCGAACTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAat                                >  1:857324/1‑100 (MQ=255)
                                                                     cccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAata                               >  1:2319539/1‑100 (MQ=255)
                                                                     cccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAata                               >  2:1057610/1‑100 (MQ=255)
                                                                     cccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAata                               >  1:853848/1‑100 (MQ=255)
                                                                        gCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATAttt                            >  2:631918/1‑100 (MQ=255)
                                                                            tcatGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCgg                        <  1:1875091/100‑1 (MQ=255)
                                                                            tcatGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCgg                        <  2:16086/100‑1 (MQ=255)
                                                                              atcaaTTGCGTCACCCTCCCTGCCGGACACGACAGCGTCGCATCCGGCCGTCCCCGGCCGGCGATACCGCCCGCTCCTGATTCCACgcaca                               >  1:2393656/4‑87 (MQ=255)
                                                                               tGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGa                      >  1:2369010/1‑99 (MQ=255)
                                                                                gAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAAt                    >  2:1493020/1‑100 (MQ=255)
                                                                                     gCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCtt               >  1:2056751/1‑100 (MQ=255)
                                                                                      cGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCttt              <  2:112917/100‑1 (MQ=255)
                                                                                      cGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCttt              >  1:2151228/1‑100 (MQ=255)
                                                                                       gTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTg             >  1:2347076/1‑100 (MQ=255)
                                                                                         aaCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGAt           <  1:1909715/100‑1 (MQ=255)
                                                                                         aaCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGAt           >  2:2268299/1‑100 (MQ=255)
                                                                                          aCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATg          >  1:924169/1‑100 (MQ=255)
                                                                                           cccGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGc         <  1:877331/100‑1 (MQ=255)
                                                                                           cccGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTAATCTACGAATGTTTCCGGGAATTCCTTTGATGc         >  1:1328279/1‑100 (MQ=255)
                                                                                           cccGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCACGCTGCGTATTCTACGAATATTTCCGGGAATTGCTTTGATg          >  1:1669379/1‑99 (MQ=255)
                                                                                              gCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAg      >  2:1145138/1‑100 (MQ=255)
                                                                                               gactGCCGGATGCGACGCTGTCGTGTCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGa     <  1:775511‑M1/96‑1 (MQ=255)
                                                                                                  tGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACa  <  1:1976065‑M1/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
GACGCCCTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACA  >  NC_000913/2837366‑2837563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.