New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2842423 =NA (NA)17 (0.200) 8/164 NT NA noncoding (1/79 nt) REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2842453 = NA (NA)noncoding (31/79 nt) REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 137 total aligned reads displayed.

CGCAGGCAACGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAG  >  NC_000913/2842324‑2842521
                                                                                                   |                                                                                                  
atctggCAACGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTg                                                                                                    <  2:2034153/96‑1 (MQ=255)
  gggatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGcc                                                                                                  <  2:588995‑M1/3‑1 (MQ=255)
  gggatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGcc                                                                                                  <  1:1801464‑M1/3‑1 (MQ=255)
  ccgatcttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGcc                                                                                                  >  2:2143162‑M1/98‑100 (MQ=255)
  cAGGCAACGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGcc                                                                                                  <  1:737621/100‑1 (MQ=255)
   ggatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCg                                                                                                 <  2:2362548‑M1/4‑1 (MQ=255)
    gatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCgg                                                                                                >  2:1191967‑M1/96‑100 (MQ=255)
     gCAACGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGa                                                                                               >  2:1960980/1‑100 (MQ=255)
       aaCGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATg                                                                                             <  2:1618491/100‑1 (MQ=255)
        aCGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATgc                                                                                            <  1:1459061/100‑1 (MQ=255)
         tcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtaggccagatcgg                                                                                           <  1:2143148‑M1/10‑8 (MQ=255)
         cGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATgcg                                                                                           >  2:780634/1‑100 (MQ=255)
            tACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATgcggcg                                                                                        <  2:1479538/100‑1 (MQ=255)
            tACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATgcggcg                                                                                        <  2:223555/100‑1 (MQ=255)
             aCGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGt                                                                                       >  1:744256/1‑100 (MQ=255)
               gCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGa                                                                                     >  2:111743/1‑100 (MQ=255)
                  gACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACg                                                                                  >  1:91609/1‑100 (MQ=255)
                  gACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACg                                                                                  <  1:392102/100‑1 (MQ=255)
                    cgcgCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGcc                                                                                <  1:2125849/100‑1 (MQ=255)
                     gcgcACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGcc                                                                                <  1:1104892/99‑1 (MQ=255)
                     gcgcACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCt                                                                               <  2:91610/100‑1 (MQ=255)
                        cACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTAt                                                                            >  2:747565/1‑100 (MQ=255)
                         cagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATc                                                                           >  2:835301‑M1/75‑100 (MQ=255)
                          agctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATcc                                                                          >  1:1524100‑M1/74‑100 (MQ=255)
                          agctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATcc                                                                          >  2:1149044‑M1/74‑100 (MQ=255)
                          agctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATcc                                                                          >  2:1023326‑M1/74‑100 (MQ=255)
                          agctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATcc                                                                          >  1:817238‑M1/74‑100 (MQ=255)
                           gctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATCCg                                                                         >  2:1622967‑M1/73‑100 (MQ=255)
                           gctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATCCg                                                                         >  2:1801474‑M1/73‑100 (MQ=255)
                           gctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggtgcgttcgacatgtagGCCGGATGCGGCGTGAACGCCTTATc                                                                           >  1:1156127‑M1/73‑98 (MQ=255)
                            ctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                        >  2:1871406‑M1/72‑100 (MQ=255)
                            ctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                        >  2:2490293‑M1/72‑100 (MQ=255)
                            cgTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                        >  2:1443522/1‑100 (MQ=255)
                            cgTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                        <  1:111742/100‑1 (MQ=255)
                            cgTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                        <  1:2510276/100‑1 (MQ=255)
                             tctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                       >  1:2476579‑M1/71‑100 (MQ=255)
                             gTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                       <  1:2153884/100‑1 (MQ=255)
                             gTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                       >  1:268255/1‑100 (MQ=255)
                              tAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                      <  1:1443514/100‑1 (MQ=255)
                              ctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                      >  1:360252‑M1/70‑100 (MQ=255)
                              ctgatgccaaatgctaaagtgcccgatgcgctgctcttagcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTAGCCGGc                                                                       >  1:1177349‑M1/70‑99 (MQ=255)
                                  cgatctttCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACa                                                                  <  1:704920/94‑1 (MQ=255)
                                  aaaTCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACa                                                                  <  1:75510/100‑1 (MQ=255)
                                  aaaTCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACa                                                                  <  1:193813/100‑1 (MQ=255)
                                   aaTCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAt                                                                 <  1:1885207/100‑1 (MQ=255)
                                      cATGCTGGTGGTATAAAAAAGTGAGTGCCAGTAACGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATggn                                                              <  2:765307/100‑3 (MQ=37)
                                       aTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCg                                                             <  2:1738248/100‑1 (MQ=255)
                                        ttCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaagatcg                                                            >  2:704923/1‑94 (MQ=255)
                                        ttCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGc                                                            <  1:5760/100‑1 (MQ=255)
                                        ttCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGc                                                            <  2:1340592/100‑1 (MQ=255)
                                         tatggtggTATAAAAAAGTGATTGCCTGTAGTGTGGAAGATTTGGAGTGTGTAGCAGTGACGGATGCGACGTGAAGGCCGGATCGGGCCTACTTGTCGCa                                                           <  1:2057321/98‑1 (MQ=255)
                                         tCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCa                                                           <  1:559142/100‑1 (MQ=255)
                                          cTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCAc                                                          >  2:1468636/1‑100 (MQ=255)
                                          cTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGAGTGAACGCCTTATCCGGCCTACATGTCGCAc                                                          >  2:399577/1‑100 (MQ=255)
                                           tggtggTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACg                                                         <  1:2436591/100‑1 (MQ=255)
                                           tggtggTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACg                                                         <  1:2386188/100‑1 (MQ=255)
                                           tggtggTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACg                                                         >  2:2385163/1‑100 (MQ=255)
                                           tggtggTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACg                                                         <  1:1433137/100‑1 (MQ=255)
                                              tggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAAc                                                      >  2:1921713/1‑100 (MQ=255)
                                              tggtATAAAAAAGTGATTGCCAGTAATGGGGAAGACTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAAc                                                      <  1:518854/100‑1 (MQ=255)
                                               ggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAAcc                                                     >  2:405869/1‑100 (MQ=255)
                                                gtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCa                                                    <  1:780631/100‑1 (MQ=255)
                                                  ataAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATg                                                  >  2:1007699/1‑100 (MQ=255)
                                                  ataAAAAAGTGAGTGCCAGTAATGGGGAAGATTTAGTGTAGGTAACAGTGCCGTATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATg                                                  <  1:1136195/100‑1 (MQ=255)
                                                   taAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGa                                                 >  2:690683/1‑100 (MQ=255)
                                                   taAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGa                                                 >  2:2334456/1‑100 (MQ=255)
                                                   taAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGa                                                 <  1:609878/100‑1 (MQ=255)
                                                   taAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGAAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTGGCACGAACCa                                                    >  1:1914215/1‑97 (MQ=255)
                                                    aaaaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGaa                                                >  2:407881/1‑100 (MQ=255)
                                                     aaaaaGTGATTGCCATTAATGTTGAAGATTTAGTGTTTGTAATAGTTCCTGATGCGGCGTGAACGCCTTTTCCATACTACATGTCGTACGAACCAtta                                                 <  1:1171019/98‑3 (MQ=255)
                                                     aaaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAg                                               <  2:1562888/100‑1 (MQ=255)
                                                     aaaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAg                                               <  2:1321084/100‑1 (MQ=255)
                                                      aaaaGTGATTGGCAGTAATGGGGAAGATTTAGAGTGGGTAACAGTGCCGGACGCGGCGTGAACGCCTTATGGGGGCTACATGTCGTAAGAACCATGa                                                 <  1:2031028/97‑1 (MQ=37)
                                                      aaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAgg                                              >  1:21809/1‑100 (MQ=255)
                                                        aaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGcc                                            <  2:1242377/100‑1 (MQ=255)
                                                           tGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGa                                         >  2:1506248/1‑100 (MQ=255)
                                                                gCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagc                                    >  2:627507/1‑100 (MQ=255)
                                                                gCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagc                                    >  2:613236/1‑100 (MQ=255)
                                                                gCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagc                                    >  1:2046895/1‑100 (MQ=255)
                                                                gCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagc                                    >  1:2568665/1‑100 (MQ=255)
                                                                  cAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagcgc                                  <  1:906815/100‑1 (MQ=255)
                                                                   aGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagcgca                                 <  2:1497974/100‑1 (MQ=255)
                                                                     tAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagcgcagc                               <  1:1671746/100‑1 (MQ=255)
                                                                        tGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAgcgcagcgca                            <  1:835851/100‑1 (MQ=255)
                                                                         ggggAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCAt                           >  2:527627/1‑100 (MQ=255)
                                                                           ggAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCg                         >  2:1221084/1‑100 (MQ=255)
                                                                            gAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCgg                        <  2:1327252/100‑1 (MQ=255)
                                                                             aaGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCggg                       <  2:268258/100‑1 (MQ=255)
                                                                                aTTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTCCATGTCGCACGAACCACGACAGCCCGATCAGCGCACCGCAGCGGGCaa                    >  1:2440057/1‑100 (MQ=25)
                                                                                  ttAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGACTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAAtt                  >  1:1540711/1‑100 (MQ=255)
                                                                                   tAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAAttt                 <  2:2055318/100‑1 (MQ=255)
                                                                                   tAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAAttt                 >  1:388970/1‑100 (MQ=255)
                                                                                      agTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGc              <  2:2413498/100‑1 (MQ=255)
                                                                                          ggTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCAttt          >  2:2393915/1‑100 (MQ=255)
                                                                                          ggTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCAttt          >  1:508051/1‑100 (MQ=255)
                                                                                            tAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGGATTTgg        >  1:185808/1‑100 (MQ=255)
                                                                                            tAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTgg        >  1:1996816/1‑100 (MQ=255)
                                                                                              aCAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCa      >  2:439728/1‑100 (MQ=255)
                                                                                                 gTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCa   >  2:557059/1‑100 (MQ=255)
                                                                                                  tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCag  >  1:342886/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
CGCAGGCAACGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAG  >  NC_000913/2842324‑2842521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.