New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 290984672 (0.790)18 (0.220) 13/162 NT 20.3% intergenic (‑180/+48) pyrG/mazG CTP synthetase/nucleoside triphosphate pyrophosphohydrolase
?NC_000913 = 2909872 76 (0.910)intergenic (‑206/+22) pyrG/mazG CTP synthetase/nucleoside triphosphate pyrophosphohydrolase

Only 100 of 124 total aligned reads displayed.

ACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTG  >  NC_000913/2909747‑2909943
                                                                                                   |                                                                                                 
acaAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGCAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGC                                                                                                   >  1:607638‑M1/1‑100 (MQ=255)
acaAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGC                                                                                                   >  2:1920961‑M1/1‑100 (MQ=255)
  aaaCTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCtt                                                                                                 <  2:34749/100‑1 (MQ=255)
     cTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTc                                                                                              >  2:2498778/1‑100 (MQ=255)
             aTCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTaaaa                                                                                      <  1:422088/100‑1 (MQ=255)
              tCCCTCCTCTTCGCCAGCGTACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTaaaaa                                                                                     <  1:410905/100‑1 (MQ=255)
              tCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCcatttgtgtcattt                                                                                     >  1:2530993‑M1/1‑86 (MQ=255)
               cccTCCTCTTCGCCAGCTCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGAGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTaaaaaa                                                                                    <  1:1608274/100‑1 (MQ=255)
                cctcctCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCTATTTAAGCGCTTGTCATTTAAAAAAt                                                                                   >  1:853514/1‑100 (MQ=255)
                cctcctCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAAt                                                                                   >  1:2214071/1‑100 (MQ=255)
                    ctctTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCcatttgtgtcattttttaaa                                                                               <  2:1645911‑M1/100‑21 (MQ=255)
                    ctctTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGaca                                                                               <  1:397918/100‑1 (MQ=255)
                       ttCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCttgtcattttttaaatgacaagc                                                                            <  2:125270‑M1/100‑24 (MQ=255)
                          gCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATg                                                                         <  2:1328011/100‑1 (MQ=255)
                           ccAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCttgtcattttttaaatgacaagcgctt                                                                        <  2:2127837‑M1/100‑28 (MQ=255)
                             aGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCttgtcattttttaaatgacaagcgcttga                                                                      <  2:2220570‑M1/100‑30 (MQ=255)
                              gcgcACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgc                                                                     <  1:1145368‑M2/100‑5 (MQ=255)
                               tccgatcttgaaatcaGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgct                                                                    >  1:518807‑M2/8‑95 (MQ=255)
                                gcACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgctt                                                                   >  2:2051326‑M2/1‑94 (MQ=255)
                                gcACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgctt                                                                   <  2:871939‑M2/100‑7 (MQ=255)
                                 cACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCcatttgtgtcattttttaaatgacaagcgcttg                                                                  <  1:894362‑M1/100‑34 (MQ=255)
                                  aCTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCcatttgtgtcattttttaaatgacaagcgcttga                                                                 <  2:655832‑M1/100‑35 (MQ=255)
                                   cTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTTTTTTTTTTTAATAGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGAc                                                                >  1:846711/1‑100 (MQ=255)
                                    tATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCcatttgtgtcattttttaaatgacaagcgcttgatt                                                               <  1:1833462‑M1/100‑37 (MQ=255)
                                    tATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGAAAATCAAGCGCcatttgtgtcattttttaaatgacaagcgcttgatt                                                               <  1:2583002‑M1/100‑37 (MQ=255)
                                     aTTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACcg                                                              <  2:2058408/100‑1 (MQ=255)
                                     aTTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACcg                                                              >  2:111598/1‑100 (MQ=255)
                                      ttGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCcatttgtgtcattttttaaatgacaagcgcttgatttg                                                             <  1:852277‑M1/100‑39 (MQ=255)
                                      ttGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCcatttgtgtcattttttaaatgacaagcgcttgatttg                                                             <  1:852158‑M1/100‑39 (MQ=255)
                                      ttGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACcgc                                                             >  1:2533718/1‑100 (MQ=255)
                                       tgaatgcaggagtGAGAAAATAGCCCCTTTGGGGTATATGTTTTTGACGCAAATCAAGCTCcatttgtgttattttttaaatgacaagcgcttgatttg                                                             <  2:1542772‑M1/93‑39 (MQ=255)
                                        gAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCcatttgtgtcattttttaaatgacaagcgcttgatttgcg                                                           <  1:2185885‑M1/100‑41 (MQ=255)
                                        gAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCcatttgtgtcattttttaaatgacaagcgcttgatttgcg                                                           <  2:700321‑M1/100‑41 (MQ=255)
                                        gAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGt                                                           >  2:1781880/1‑100 (MQ=255)
                                        gAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGt                                                           >  2:2085615/1‑100 (MQ=255)
                                          aaTCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCcatttgtgtcattttttaaatgacaagcgcttgatttgcgtc                                                         <  1:2035790‑M1/100‑43 (MQ=255)
                                          aaTCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTaa                                                         >  1:1991431/1‑100 (MQ=255)
                                           aTCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGAGGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAAt                                                        <  1:1657737/100‑1 (MQ=255)
                                           aTCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAAt                                                        >  2:1124194/1‑100 (MQ=255)
                                           aTCAGGAGTGAGAAAATAGCAAATTTGCGTTAAATGTTTTTGACACAACTCAAACTCTTGTCACTTAAAAAATAACACAAATGacgat                                                                    >  1:370996/1‑86 (MQ=255)
                                           aTCAGGAGCGAGAAAATAGCCCCTTTGGGGCAAATCTTTTTGACGCAAATCAAGCGCTTGTCATGTAAAAAATGACACAAATCGCGCTTGACCGGGTAAt                                                        >  1:1287067/1‑100 (MQ=255)
                                               ggAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTccc                                                    >  2:1002415/1‑100 (MQ=255)
                                                 aGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCtt                                                  >  1:1536947/1‑100 (MQ=255)
                                                  gTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTAGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTa                                                 <  1:1645352/100‑1 (MQ=255)
                                                   tGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTag                                                <  1:1649761/100‑1 (MQ=255)
                                                   tGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTag                                                >  2:196762/1‑100 (MQ=255)
                                                   tGAGAAAATAGACCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTag                                                <  1:2096518/100‑1 (MQ=255)
                                                    cgatctaTAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTaga                                               <  2:1939886/94‑1 (MQ=255)
                                                      gaAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAgaga                                             <  1:1461998/100‑1 (MQ=255)
                                                        aaaTAGCCCCTTTGGGGTAAATGTCTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATc                                           <  2:1556574/100‑1 (MQ=255)
                                                        aaaTAGATCCTTTAGGGTAAATGTTTCCGACAAAAACGAAGAGCGTCCCATTCAAAAAATGACACAAATGGCGCGTAACCGCGTAAGCCCACTAGAGATc                                           <  1:555133/100‑1 (MQ=255)
                                                            aGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCttgtcattttttaaatgacaagcgcttgatttgcgtcaaaaacatttaccccaaaggggc                                       <  2:2067650‑M1/100‑61 (MQ=255)
                                                             gCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACAA‑‑‑cgcttgatttgcgtcaaaaacatttaccccaaaggggct                                   <  2:2067650‑M2/100‑40 (MQ=255)
                                                               cccTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTcc                                    >  2:1403065/1‑100 (MQ=255)
                                                                    tGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCg                               >  1:173695/1‑100 (MQ=255)
                                                                    tGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCg                               <  1:1154252/100‑1 (MQ=255)
                                                                    tGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCACTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCg                               <  2:2481166/100‑1 (MQ=255)
                                                                     ggggTAAATGTTTTTGACGCAAATCAAGCGCTTGTTATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGt                              >  2:2201851/1‑100 (MQ=255)
                                                                      gggTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGAACAATTTCCTGCCGtt                             >  1:1511405/1‑100 (MQ=255)
                                                                       ggTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGttt                            >  2:817938/1‑100 (MQ=255)
                                                                       ggTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGttt                            >  2:475629/1‑100 (MQ=255)
                                                                        gTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGtttt                           >  1:1531929/1‑100 (MQ=255)
                                                                        gTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATGCCCTTAGAGATCAATTTCCTGCCGtttt                           <  1:1467789/100‑1 (MQ=255)
                                                                           aaTGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTAcc                        >  2:649114/1‑100 (MQ=255)
                                                                           aaTGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTAcc                        <  2:2251767/100‑1 (MQ=255)
                                                                           aaTGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTAcc                        <  1:2045188/100‑1 (MQ=255)
                                                                            aTGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCt                       >  1:1891846/1‑100 (MQ=255)
                                                                                ttttGTCTCAAATCAAGCGCTTATCATTTAAAAAATGAGTCAAATGGCGATTGACCGCGTAATTCTCTTAGATACAAATTTCCTGCCGTTTTACCTg                      >  1:1246750/1‑97 (MQ=255)
                                                                                ttttGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTg                   >  2:803701/1‑100 (MQ=255)
                                                                                  ttGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGGTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGc                  <  2:2433749/99‑1 (MQ=255)
                                                                                    gACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatt               <  1:2035790‑M2/100‑59 (MQ=255)
                                                                                    gACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCGCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAg               >  1:1406499/1‑100 (MQ=255)
                                                                                    gACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAg               <  2:353336/100‑1 (MQ=255)
                                                                                     aCGCAAATCAAGCGCTTGACATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccacaaaggggctatttactcactcctgatt               <  1:1213111‑M2/99‑59 (MQ=255)
                                                                                      cGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttc             <  2:700321‑M2/100‑61 (MQ=255)
                                                                                      cGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttc             <  1:2185885‑M2/100‑61 (MQ=255)
                                                                                       tccgatctagcgccatttgtgtcattttttaaatgacaagcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttca            <  2:518809‑M1/92‑88 (MQ=255)
                                                                                       gCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGAct            >  2:1401769/1‑100 (MQ=255)
                                                                                        cAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaa           <  1:852158‑M2/100‑63 (MQ=255)
                                                                                        cAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGActt           >  1:1649638/1‑100 (MQ=255)
                                                                                          aaTCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgattttcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaata         <  1:2583002‑M2/100‑65 (MQ=255)
                                                                                          aaTCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaata         <  1:1833462‑M2/100‑65 (MQ=255)
                                                                                          aaTCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGActtct         >  1:1078007/1‑100 (MQ=255)
                                                                                           aTCAAGCGCTTGTCATTTAAAAAATGACACAACTGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGActtc          <  1:2178914/98‑1 (MQ=255)
                                                                                            tCAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaatagt       <  2:655832‑M2/100‑67 (MQ=255)
                                                                                            tCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACttcttc       >  1:1265190/1‑100 (MQ=255)
                                                                                            tCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACttcttc       >  2:1911574/1‑100 (MQ=255)
                                                                                            tCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACttcttc       >  2:1859535/1‑100 (MQ=255)
                                                                                            tCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACttcttc       >  2:839770/1‑100 (MQ=255)
                                                                                             cAAGCGCTTGTCATTTAAAAAATGACACAAATGgcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaatagtg      <  1:894362‑M2/100‑68 (MQ=255)
                                                                                             cAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTcc      >  1:1103990/1‑100 (MQ=255)
                                                                                             cAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTcc      <  2:624035/100‑1 (MQ=255)
                                                                                             cAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTcc      <  1:1395954/100‑1 (MQ=255)
                                                                                              aaGCGCcatttgtgtcattttttaaatgacaagcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaatagtgc     <  2:871939‑M1/100‑95 (MQ=255)
                                                                                              aaGCGCTTGTCATTTAAAAAATGACAA‑‑‑cgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaatagtgcgctgg  <  2:2127837‑M2/100‑73 (MQ=255)
                                                                                               aGCGCcatttgtgtcattttttaaatgacaagcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaagatcgga    >  1:518807‑M1/1‑5 (MQ=255)
                                                                                                gcgccatttgtgtcattttttaaatgacaagcgcttgatttgcgtcaaaaacatttaccccaaaggggctattttctcactcctgatttcaatagtgcgc   <  1:1145368‑M1/100‑97 (MQ=255)
                                                                                                 cgcTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTg  <  2:1198218/100‑1 (MQ=255)
                                                                                                 cgcTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTg  <  1:993206/100‑1 (MQ=255)
                                                                                                 cgcTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTg  >  2:881326/1‑100 (MQ=255)
                                                                                                   |                                                                                                 
ACAAACTTTCATTATCCCTCCTCTTCGCCAGCGCACTATTGAAATCAGGAGTGAGAAAATAGCCCCTTTGGGGTAAATGTTTTTGACGCAAATCAAGCGCTTGTCATTTAAAAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTG  >  NC_000913/2909747‑2909943

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.