New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 377571899 (1.080)19 (0.220) 10/166 NT 17.3% coding (147/588 nt) mtlR mannitol operon repressor
?NC_000913 = 3775735 90 (1.050)coding (164/588 nt) mtlR mannitol operon repressor

Only 100 of 179 total aligned reads displayed.

GATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGC  >  NC_000913/3775620‑3775817
                                                                                                  |                                                                                                   
gATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCAccgccg                                                                                                    >  2:28648/1‑100 (MQ=255)
 atatGCAGGCAACAATGGAACAAACCCAGGCCTTTTAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCTAAGCTTTCTGATCAccgccg                                                                                                    <  1:2075738/99‑1 (MQ=255)
  tatGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTc                                                                                                  <  1:1292515/100‑1 (MQ=255)
  tatGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGACAAAACCGTGCGAAGCTTTCTGATCACCGCCGTc                                                                                                  <  1:429141/100‑1 (MQ=255)
      cAGGCAACAATGGAACAAACCCAGGCCTTTGAAGACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGc                                                                                              <  2:642638/100‑1 (MQ=255)
      cAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGc                                                                                              >  2:877362/1‑100 (MQ=255)
      cAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGc                                                                                              <  1:936167/100‑1 (MQ=255)
      cAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGc                                                                                              >  1:957373/1‑100 (MQ=255)
      cAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGc                                                                                              <  2:1079413/100‑1 (MQ=255)
         gCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTcc                                                                                           <  1:737600/100‑1 (MQ=255)
                tGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGa                                                                                    <  2:1232375/100‑1 (MQ=255)
                 ggAACGAACCCAGGCCTTTGAAAACCGTGTGCTTGAGTGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCtcggtcaggagctcgacg                                                                                   <  1:946099‑M1/100‑19 (MQ=255)
                 ggAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAg                                                                                   >  1:944954‑M2/1‑99 (MQ=255)
                 ggAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAACCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAg                                                                                   <  1:1366122‑M2/100‑2 (MQ=255)
                  gAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAgg                                                                                  <  1:371651‑M2/100‑3 (MQ=255)
                  gAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAgg                                                                                  <  2:2093200‑M2/100‑3 (MQ=255)
                  gAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAgg                                                                                  >  2:957376‑M2/1‑98 (MQ=255)
                   aaCAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAATCCGTGCGAAGCTTTCTGATCACCGCCtcggtcaggagctcgacggc                                                                                 <  1:1432709‑M1/100‑21 (MQ=255)
                   aaCAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAggc                                                                                 >  1:912615‑M2/1‑97 (MQ=255)
                     cAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCtcggtcaggagctcgacggcgg                                                                               <  2:744621‑M1/100‑23 (MQ=255)
                     cAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCtcggtcaggagctcgacggcgg                                                                               <  2:20497‑M1/100‑23 (MQ=255)
                     cAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCtcggtcaggagctcgacggcgg                                                                               <  2:2438387‑M1/100‑23 (MQ=255)
                     cAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAggcgg                                                                               >  2:1012581‑M2/1‑95 (MQ=255)
                      aaaCCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCtcggtcaggagctcgacggcggt                                                                              <  2:1314099‑M1/100‑24 (MQ=255)
                       aaCCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCtcggtcaggagctcgacggcggtg                                                                             <  2:1624267‑M1/100‑25 (MQ=255)
                       aaCCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTa                                                                             >  1:617963/1‑100 (MQ=255)
                        agtaacggttctacagcatacttcaccgcgtaatcgtctttgcggaatacctgaagcaccagaagatttACCGCCGTCGAGCTCCTGACCGAGGCGGTaa                                                                            <  2:1903441‑M1/31‑1 (MQ=255)
                        aCCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCtcggtcaggagctcgacggcggtga                                                                            <  2:1926010‑M1/100‑26 (MQ=255)
                         gtaacggttctacagcatacttcaccgcgtaatcgtctttgcggaatacctgaagcaccagaagatttACCGCCGTCGAGCTCCTGACCGAGGCGGTaaa                                                                           >  1:1091393‑M1/69‑100 (MQ=255)
                         cccAGTCCTTTTAAAACCGTGTGCTTTATCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTaaa                                                                           <  2:477238/100‑1 (MQ=255)
                         cccAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCtcggtcaggagctcgacggcggtgat                                                                           <  1:1955096‑M1/100‑27 (MQ=255)
                         cccAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTaaa                                                                           <  2:1033305/100‑1 (MQ=255)
                         cccAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTaaa                                                                           >  1:373567/1‑100 (MQ=255)
                          taacggttctacagcatacttcaccgcgtaatcgtctttgcggaatacctgaagcaccagaagatttACCGCCGTCGAGCTCCTGACCGAGGCGGTAAAt                                                                          >  1:1903431‑M1/68‑100 (MQ=255)
                          cgaGGCCGTTGAAAGCCGTGTGCGTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTaa                                                                            <  1:919960/96‑1 (MQ=255)
                           cAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAAtc                                                                         >  2:1440210/1‑100 (MQ=255)
                                cTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTg                                                                    >  1:497475/1‑100 (MQ=255)
                                 tttGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTgg                                                                   <  2:2321147/100‑1 (MQ=255)
                                 tttGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTgg                                                                   <  2:512097/100‑1 (MQ=255)
                                  ttGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGt                                                                  <  1:2138453/100‑1 (MQ=255)
                                  ttGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGt                                                                  >  2:852466/1‑100 (MQ=255)
                                     aaaaCCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAggcggtgatcagaaagcttcg                                                               <  2:2269332‑M2/100‑22 (MQ=255)
                                     aaaaCCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAggcggtgatcagaaagcttcg                                                               <  2:2266361‑M2/100‑22 (MQ=255)
                                     aaaaCCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCt                                                               >  1:80846/1‑100 (MQ=255)
                                     aaaaCCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCt                                                               >  2:1107160/1‑100 (MQ=255)
                                      aaaCCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCtt                                                              <  2:2227021/100‑1 (MQ=255)
                                          cGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAgg                                                          <  1:1440202/100‑1 (MQ=255)
                                           gtgtGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGt                                                         >  2:2195174/1‑100 (MQ=255)
                                               gCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTc                                                     >  2:670771/1‑100 (MQ=255)
                                                cTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTcc                                                    <  1:1240582/100‑1 (MQ=255)
                                                 ccgcgtaatcgtctttgcggaatacctgaagcaccagaagatttACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCg                                                   >  1:965174‑M1/45‑100 (MQ=255)
                                                  tGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGc                                                  <  2:422455/100‑1 (MQ=255)
                                                      cGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAg                                              <  2:1217842/100‑1 (MQ=255)
                                                      cGTCTGAATGCTGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGa                                             >  1:1151741/1‑100 (MQ=255)
                                                        tCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGAc                                            >  1:1890255/1‑100 (MQ=255)
                                                         cTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACg                                           <  1:2567389/100‑1 (MQ=255)
                                                          tGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGa                                          >  2:390840/1‑100 (MQ=255)
                                                           gAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGGCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGAt                                         >  1:1594607/1‑100 (MQ=255)
                                                            ccgatctgCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGAtt                                        <  2:1414780/93‑1 (MQ=255)
                                                            aaTGCTGGCAGTACCGTGCGAAGCTGTCGGATCACCGCCATCGGGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTAAGGTATTCCGCAAAGACGa                                          <  1:684982/98‑1 (MQ=255)
                                                            aaTGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGAtt                                        <  1:966379/100‑1 (MQ=255)
                                                            aaTGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGAtt                                        <  2:926119/100‑1 (MQ=255)
                                                               gCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTAcg                                     <  2:2300621/100‑1 (MQ=255)
                                                                cTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTAcgc                                    >  2:96623/1‑100 (MQ=255)
                                                                 tGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTAcgc                                    >  1:595178/1‑99 (MQ=255)
                                                                  ggCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCgg                                  >  1:1447686/1‑100 (MQ=255)
                                                                   gCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCGTGACCGAGGCGGTAAATCTACTGGTGCTTCAGGTATTCCGCAAAGACGATTagatcgg                                 >  1:1414772/1‑94 (MQ=255)
                                                                       aaCCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAg                             <  2:2058582/100‑1 (MQ=255)
                                                                        aCCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGt                            >  1:1138681/1‑100 (MQ=255)
                                                                         ccGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGt                            <  1:1186553/99‑1 (MQ=255)
                                                                            tGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGc                        <  2:1717323/100‑1 (MQ=255)
                                                                               gAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGt                     <  1:1830326/100‑1 (MQ=255)
                                                                                 aGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAg                   <  2:1371405/100‑1 (MQ=255)
                                                                                    cgatctatcaccgCCGTCGAGCTCCTGACCGAggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaagg                >  1:1263626‑M2/7‑32 (MQ=255)
                                                                                     ttCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAAcc               <  1:2508160/100‑1 (MQ=255)
                                                                                     ttCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAAcc               >  2:395021/1‑100 (MQ=255)
                                                                                        tGATCACCGCCGTCGAGCTCCTGACCGAggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctg            <  1:1189335‑M2/100‑73 (MQ=255)
                                                                                        tGATCACCGCCGTCGACCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGtt            <  2:1775999/100‑1 (MQ=255)
                                                                                         gATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTa           >  1:44826/1‑100 (MQ=255)
                                                                                         gATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTa           <  2:1880814/100‑1 (MQ=255)
                                                                                          aTCACCGCCGTCGAGCTCCTGACCGAggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcgatcg          <  2:1263630‑M2/100‑75 (MQ=255)
                                                                                          aTCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTAc          <  1:2195159/100‑1 (MQ=255)
                                                                                            cACCGCCGTCGAGCTCCTGACCGAggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtt        <  2:1624267‑M2/100‑77 (MQ=255)
                                                                                            cACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTc        >  1:2357162/1‑100 (MQ=255)
                                                                                             aCCGCCtcggtcaggagctcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggttt       >  1:1226568‑M1/1‑6 (MQ=255)
                                                                                             aCCGCCGTCGAGCTCCTGACCGAggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggttt       <  2:1776631‑M2/100‑78 (MQ=255)
                                                                                             aCCGCCGTCGAGCTCCTGACCGAggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggttt       <  2:866168‑M2/100‑78 (MQ=255)
                                                                                             aCCGCCGTCGAGCTCCTGACCGAggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggttt       <  1:1895656‑M2/100‑78 (MQ=255)
                                                                                              ccgccgTCGAGCTCCTGACCGAggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttg      <  2:20497‑M2/100‑79 (MQ=255)
                                                                                              ccgccgTCGAGCTCCTGACCGAggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttg      <  2:1138622‑M2/100‑79 (MQ=255)
                                                                                              ccGCCtcggtcaggagctcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttg      >  2:1907820‑M1/1‑5 (MQ=255)
                                                                                              ccGCCtcggtcaggagctcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttg      >  2:1012581‑M1/1‑5 (MQ=255)
                                                                                                gCCtcggtcaggagctcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttgtt    >  1:912615‑M1/1‑3 (MQ=255)
                                                                                                GCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTGTTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACg    <  1:1433008‑M1/100‑1 (MQ=255)
                                                                                                 cctcggtcaggagctcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttgttc   <  2:2138467‑M1/100‑99 (MQ=255)
                                                                                                 CCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACgg   >  2:76647‑M1/1‑100 (MQ=255)
                                                                                                 CCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACgg   >  2:1856890‑M1/1‑100 (MQ=255)
                                                                                                  ctcggtcaggagctcgacggcggtgatcagaaaggttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttgttcc  <  1:1366122‑M1/100‑100 (MQ=255)
                                                                                                  ctcggtcaggagctcgacggcggtgatcagaaagcttcgcacggttttgccagcattcagacgctcaagcacacggttttcaaaggcctgggtttgttcc  >  2:249386‑M1/1‑1 (MQ=255)
                                                                                                  CGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGc  >  2:1368769‑M1/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
GATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGC  >  NC_000913/3775620‑3775817

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.