New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 10875688 (0.960)15 (0.180) 5/166 NT 15.2% coding (478/2706 nt) secA preprotein translocase subunit, ATPase
?NC_000913 = 108767 86 (1.010)coding (489/2706 nt) secA preprotein translocase subunit, ATPase

Only 100 of 148 total aligned reads displayed.

CACGTAGTTACCGTCAACGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTACCTGCGCGACAACATGGCGT  >  NC_000913/108657‑108855
                                                                                                   |                                                                                                   
cACGTAGTTACCGTCAACGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGG                                                                                                     <  2:1169066‑M1/100‑1 (MQ=255)
  cGTAGTTACCGTCAACGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGc                                                                                                   >  2:849299/1‑100 (MQ=255)
    tAGTTACCGTCAACGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCAt                                                                                                 >  2:1048186/1‑100 (MQ=255)
     aGTTACCGTCAACGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATg                                                                                                >  1:1988144/1‑100 (MQ=255)
       ttACCGTCAACGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGcc                                                                                              <  2:842390/100‑1 (MQ=255)
        tACCGTCAACGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCa                                                                                             >  1:1830033/1‑100 (MQ=255)
          ccGTCAACGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGc                                                                                           >  2:2017528/1‑100 (MQ=255)
            gTCAACGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCAc                                                                                         <  2:2008364‑M2/100‑2 (MQ=255)
              cAACGCCTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCAccg                                                                                       >  2:525693‑M2/1‑97 (MQ=255)
              cAACGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCAccg                                                                                       <  2:1031251‑M2/100‑4 (MQ=255)
               aaCGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCAccgg                                                                                      >  1:670168‑M2/1‑96 (MQ=255)
               aaCGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCAccgg                                                                                      <  1:1049709‑M2/100‑5 (MQ=255)
                aCGACTACCTGGCGCAACGTGACGCCGAAATCAACCGTCCGCTGTTTGAATTCCTTGGCCGGACTGTCGGTATCAACCTGCCGGGCATGCCAGCAccgg                                                                                      >  1:2052138‑M2/1‑95 (MQ=255)
                 cGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCGGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCAccggca                                                                                    >  1:539206‑M2/1‑94 (MQ=255)
                   aCTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGtgctggcatgcccggcagg                                                                                  <  2:2435717‑M1/100‑20 (MQ=255)
                   aCTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGtgctggcatgcccggcagg                                                                                  <  2:1802693‑M1/100‑20 (MQ=255)
                   aCTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGtgctggcatgcccggcagg                                                                                  <  2:1161342‑M1/100‑20 (MQ=255)
                    cTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGtgctggcatgcccggcaggt                                                                                 <  2:923981‑M1/100‑21 (MQ=255)
                    cTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGtgctggcatgcccggcaggt                                                                                 <  2:637366‑M1/100‑21 (MQ=255)
                    cTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGtgctggcatgcccggcaggt                                                                                 <  1:405495‑M1/100‑21 (MQ=255)
                    cTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGtgctggcatgcccggcaggt                                                                                 <  1:146709‑M1/100‑21 (MQ=255)
                    cTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGtgctggcatgcccggcagg                                                                                  <  2:427480‑M1/99‑20 (MQ=255)
                     tACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAg                                                                                 <  2:1024359/99‑1 (MQ=255)
                      aCCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAgcg                                                                               >  2:2242815/1‑100 (MQ=255)
                      aCCTGGCGAAACGTGACGCGGATAACAACCGTTCGCTGTTTGAGTTCCTTGGCCTGACGGTCGGTAGCAACCTGCCGGtgctggcatgcccggcagg                                                                                  <  1:2381414‑M1/97‑20 (MQ=255)
                       ccTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAgcg                                                                               <  1:1172286/99‑1 (MQ=255)
                         tGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGa                                                                            >  1:2328557/1‑100 (MQ=255)
                          ggCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGaa                                                                           <  2:1245944/100‑1 (MQ=255)
                          ggCGCAACGTGACACCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCCGACTGTCGGTATCACCCTGCCCGACATGCCCGCACCCGCAAAgcgc                                                                              >  1:1601377/1‑97 (MQ=255)
                            cgcAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGaa                                                                           >  1:2142139/1‑98 (MQ=255)
                             gcAACGTGACGCCGAAAACAACCGTCCGCTGTTGGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAg                                                                          <  1:1463864/98‑1 (MQ=255)
                              cAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCtt                                                                       >  2:1611617/1‑100 (MQ=255)
                                aCGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTAc                                                                     <  2:1988155/100‑1 (MQ=255)
                                aCGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTAc                                                                     <  2:2209880/100‑1 (MQ=255)
                                    gACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAg                                                                 <  2:1103246/100‑1 (MQ=255)
                                    gACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAg                                                                 >  1:402309/1‑100 (MQ=255)
                                     aCGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGc                                                                <  2:2328571/100‑1 (MQ=255)
                                      cGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCt                                                               >  2:1572100/1‑100 (MQ=255)
                                      cGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCt                                                               >  2:913370/1‑100 (MQ=255)
                                           aaaaCAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACAt                                                          <  1:50920/100‑1 (MQ=255)
                                            aaaCAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGTAAAGCGCGAAGCTTACGCAGCTg                                                              <  1:839523/95‑1 (MQ=255)
                                                   cGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGGATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACg                                                  >  1:1783558/1‑100 (MQ=255)
                                                    gTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACgg                                                 >  2:2579110/1‑100 (MQ=255)
                                                      ccGCTGTTTCAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGCGCATGCCAGCACCGGCACAGCGCGAAGCTTACGCGGCTGACATCACTTACGGTa                                               <  1:210335/100‑1 (MQ=255)
                                                       cGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTAc                                              >  2:1840659/1‑100 (MQ=255)
                                                        gCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTCCGGTACg                                             >  2:1367711/1‑100 (MQ=255)
                                                        gCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACg                                             <  2:1722048/100‑1 (MQ=255)
                                                        gCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACg                                             <  2:1202109/100‑1 (MQ=255)
                                                         cTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGa                                            <  1:1837616/100‑1 (MQ=255)
                                                            tttGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGaaca                                         <  1:595266/100‑1 (MQ=255)
                                                             ttGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGaacaa                                        >  2:1408655/1‑100 (MQ=255)
                                                              tGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGaacaac                                       <  1:1031248/100‑1 (MQ=255)
                                                               gAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACg                                      >  2:1879916/1‑100 (MQ=255)
                                                               gAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACg                                      >  2:1820045/1‑100 (MQ=255)
                                                               gAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACg                                      >  1:1723211/1‑100 (MQ=255)
                                                                 aTTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGaa                                    >  1:1679010/1‑100 (MQ=255)
                                                                  ttCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAAt                                   <  2:2468823/100‑1 (MQ=255)
                                                                   tCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATa                                  >  1:1213570/1‑100 (MQ=255)
                                                                    ccTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATAc                                 >  1:501244/1‑100 (MQ=255)
                                                                    ccTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATAc                                 >  2:1112981/1‑100 (MQ=255)
                                                                    ccTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATAc                                 >  1:1266053/1‑100 (MQ=255)
                                                                      ttGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACgg                               <  2:2432460/100‑1 (MQ=255)
                                                                        ggCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCt                             >  1:1915227/1‑100 (MQ=255)
                                                                        ggCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCt                             >  2:392123/1‑100 (MQ=255)
                                                                         gCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCtt                            >  2:2287332/1‑100 (MQ=255)
                                                                           cTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTg                          <  2:1148709/100‑1 (MQ=255)
                                                                            tGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGa                         <  2:2400877/100‑1 (MQ=255)
                                                                                 gTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTAcc                    <  2:256722/100‑1 (MQ=255)
                                                                                 gTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTAcc                    >  1:1855377/1‑100 (MQ=255)
                                                                                 gTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTAcc                    >  2:202768/1‑100 (MQ=255)
                                                                                    ggTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTGCGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGAGTACCTgc                 >  1:719344/1‑100 (MQ=255)
                                                                                    ggTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTACCTgc                 >  2:2138231/1‑100 (MQ=255)
                                                                                     gTATCAACCTGCCGGGCATGCCAGCAccggcaggttgataccgacagtcaggccaaggaattcaaacagcggacggttgttttcggcgtcacgttgcgcc                <  1:540809‑M2/100‑75 (MQ=255)
                                                                                      tATCAACCTGCCGGGCATGTCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGGACGAACAACGAATACGGCTTTGACTACCTgcgc               <  1:1559317/100‑1 (MQ=255)
                                                                                      tATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTACCTgcgc               >  2:1300872/1‑100 (MQ=255)
                                                                                        tCAACCTGCCGGGCATGCCAGCACCGCCAAAGCGCGACGCTTACGCAGCTGACCTCACTTACGGTACGAACAACGAATACAGCCCTGACTCACTGCGCGa             >  1:974195/1‑100 (MQ=255)
                                                                                         cAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTACCTGCGCGac            >  2:2241172/1‑100 (MQ=255)
                                                                                          aaCCTGCCGGGCATGCCAGCAccggcaggttgataccgacagtcaggccaaggaattcaaacagcggacggttgttttcggcgtcacgttgcgccaggta           <  1:1755368‑M2/100‑80 (MQ=255)
                                                                                          aaCCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAACCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCATTGACTACCTGCCCGaca           >  1:1159188/1‑100 (MQ=255)
                                                                                           aCCTGCCGGGCATGCCAGCAccggcaggttgataccgacagtcaggccaaggaattcaaacagcggacggttgttttcggcgtcacgttgcgccaggtag          <  2:637366‑M2/100‑81 (MQ=255)
                                                                                            ccTGCCGGGCATGCCAGCAccggcaggttgctaccgaccgtcaggccaaggaactcaaacagcgaacggttgttatccgcgtcacgtttcgccaggt            <  1:2381414‑M2/97‑79 (MQ=255)
                                                                                            ccTGCCGGGCATGCCAGCAccggcaggttgataccgacagtcaggccaaggaattcacaccgcggaccgttgttttcggcgtcacgttgcgccaggtag          <  1:1818557‑M2/99‑81 (MQ=255)
                                                                                            ccTGCCGGGCATGCCAGCAccggcaggttgataccgacagtcaggccaaggaattcaaacagcggacggttgttttcggcgtcacgttgcgccaggtagt         <  2:1705957‑M2/100‑82 (MQ=255)
                                                                                            ccTGCCGGGCATGCCAGCAccggcaggttgataccgacagtcaggccaaggaattcaaacagcggacggttgttttcggcgtcacgttgcgccaggtagt         <  2:1802693‑M2/100‑82 (MQ=255)
                                                                                            ccTGCCGGGCATGCCAGCAccggcaggttgataccgacagtcaggccaaggaattcaaacagcggacggttgttttcggcgtcacgttgcgccaggtagt         <  2:1880378‑M2/100‑82 (MQ=255)
                                                                                             cTGCCGGGCATGCCAGCAccggcaggttgataccgacagtcaggccaaggaattcaaacagcggacggttgttttcggcgtcacgttgcgccaggtagtc        <  2:1930656‑M2/100‑83 (MQ=255)
                                                                                             cTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTACCTGCGCGacaaca        >  2:1534358/1‑100 (MQ=255)
                                                                                              tGCCGGtgctggcatgcccggcaggttgataccgacagtcaggccaaggaattcaaacagccgacggttgttttcggcgtcacgttgcgccaggtagtcg       >  1:539206‑M1/1‑6 (MQ=255)
                                                                                              tGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTACCTGCGCGACAACAt       >  2:1269537/1‑100 (MQ=255)
                                                                                               gCCGGtgctggcatgcccggcaggttgataccgacagtcaggccaaggaattcaaacagcggacggttgttttcggcgtcacgttgcgccaggtagtcgt      <  2:1565408‑M1/100‑96 (MQ=255)
                                                                                               gCCGGtgctggcatgcccggcaggttgataccgacagtcaggccaaggaattcaaacagcggacggttgttttcggcgtcacgttgcgccaggtagtcgt      >  2:2416383‑M1/1‑5 (MQ=255)
                                                                                                ccGGtgctggcatgcccggcaggttgataccgacagtccggccaaggaattcaaacagcggacggttgatttcggcgtcacgttgcgccaggtagtcgt      >  1:2052138‑M1/1‑4 (MQ=255)
                                                                                                ccGGtgctggcatgcccggcaggttgataccgacagtcaggccaaggaattcaaacagcggacggttgttttcggcgtcacgttgcgccaggtagtcgtt     >  1:670168‑M1/1‑4 (MQ=255)
                                                                                                ccGGtgctggcatgcccggcaggttgataccgacagtcaggccaaggaattcaaacagcggacggttgttttcggcgtcacgttgcgccaggtagtcgtt     <  1:1049709‑M1/100‑97 (MQ=255)
                                                                                                ccGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTACCTGCGCGACAACATgg     <  1:494701/100‑1 (MQ=255)
                                                                                                ccGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTACCTGCGCGACAACATgg     <  2:1915237/100‑1 (MQ=255)
                                                                                                 cGGtgctggcatgcccggcaggttgataccgacagtcaggccaaggaattcaaacagcggacggttgttttcggcgtcacgttgcgccaggtaggcgttg    >  2:525693‑M1/1‑3 (MQ=255)
                                                                                                 cGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTACCTGCGCGACAACATGGc    >  1:479883/1‑100 (MQ=255)
                                                                                                   gtgctggcatgcccggcaggttgataccgacagtcaggccaaggaattcaaacagcggacggttgttttcggcgtcacgttgcgccaggtagtcgttgac  <  2:2518438‑M1/100‑100 (MQ=255)
                                                                                                   ggCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTACCTGCGCGACAACATGGCGt  <  2:1871490/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CACGTAGTTACCGTCAACGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTACCTGCGCGACAACATGGCGT  >  NC_000913/108657‑108855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.