New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 213635NA (NA)9 (0.110) 7/164 NT NA noncoding (4/37 nt) REP15 (repetitive extragenic palindromic) element; contains 1 REP sequences REP15 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 213668 NA (NA)noncoding (37/37 nt) REP15 (repetitive extragenic palindromic) element; contains 1 REP sequences REP15 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 150 total aligned reads displayed.

CTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTT  >  NC_000913/213537‑213734
                                                                                                  |                                                                                                   
cTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAg                                                                                                    >  2:1229764‑M1/1‑99 (MQ=255)
cTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAg                                                                                                    <  1:664727‑M1/100‑2 (MQ=255)
 tGATTGCGGCGGCAGGGGTATTTGTGACTCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgc                                                                                                   <  1:1633448‑M1/100‑3 (MQ=255)
 tGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgc                                                                                                   <  1:1966327‑M1/100‑3 (MQ=255)
  gATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgcc                                                                                                  >  1:1425009‑M1/1‑97 (MQ=255)
    ttGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccgg                                                                                                <  1:89290‑M1/100‑6 (MQ=255)
    ttGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccgg                                                                                                >  2:129238‑M1/1‑95 (MQ=255)
     tGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccgga                                                                                               >  1:2487626‑M1/1‑94 (MQ=255)
     tGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccgga                                                                                               <  1:649423‑M1/100‑7 (MQ=255)
      gcggcgGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccggat                                                                                              <  2:661776‑M1/100‑8 (MQ=255)
      gcggcgGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccggat                                                                                              <  2:247496‑M1/100‑8 (MQ=255)
      gcggcgGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccggat                                                                                              <  2:1478933‑M1/100‑8 (MQ=255)
      ccgatctcaggggtaTTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTTTGGCAGAAAACGCTTAGTTAAGTGAAAgccggat                                                                                              <  2:1903439‑M1/93‑8 (MQ=255)
       cggcggCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATa                                                                                             >  2:2554860/1‑100 (MQ=255)
          cggcAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGa                                                                                          <  2:1320786/100‑1 (MQ=255)
           ggcAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGAc                                                                                         <  2:1925997/100‑1 (MQ=255)
             cAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTTTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATagatcgg                                                                                       >  1:1903429/1‑94 (MQ=255)
             cAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGc                                                                                       <  2:2197355/100‑1 (MQ=255)
              aGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCa                                                                                      <  2:2268932/100‑1 (MQ=255)
               ggggTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGGCGCa                                                                                      >  1:845283/1‑99 (MQ=255)
               ggggTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCAt                                                                                     <  2:933838/100‑1 (MQ=255)
                gggTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATc                                                                                    >  1:1560644/1‑100 (MQ=255)
                gggTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATc                                                                                    <  1:823305/100‑1 (MQ=255)
                 ggTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGGTTTGTGTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCa                                                                                   >  1:360314/1‑100 (MQ=255)
                   tATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCaaa                                                                                 >  2:281536/1‑100 (MQ=255)
                    aTTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAAc                                                                                >  2:746951/1‑100 (MQ=255)
                       tgtgACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTc                                                                             >  1:2037317/1‑100 (MQ=255)
                        gtgACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTGTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTc                                                                             >  1:1241408/1‑99 (MQ=255)
                        gtgACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCg                                                                            >  2:1072460/1‑100 (MQ=255)
                          gACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCA                                                                          <  2:1994039‑M2/100‑1 (MQ=255)
                          gACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCA                                                                          <  2:2029212‑M2/100‑1 (MQ=255)
                            cGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATC                                                                        <  1:1537487‑M2/100‑1 (MQ=255)
                             gCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAGGTGAAAGCCGGATAAGACGCATCAAACGTCGCATC                                                                        <  1:1338582‑M2/99‑1 (MQ=255)
                              cAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCG                                                                      <  2:2310172‑M2/100‑1 (MQ=255)
                              cAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCG                                                                      <  1:723080‑M2/100‑1 (MQ=255)
                               aagaagATGTCGCTGAAAGTGAGAATGGCGTAAGTTTTGTCTGGAAGAAAACGCTTAGTTAAGTGAAAgccggatgcgacgtttgatgcgtcttatccgg                                                                     <  2:117852‑M1/100‑33 (MQ=255)
                                agaagGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccggatgcgacgtttgatgcgtcttatccggc                                                                    <  2:1090580‑M1/100‑34 (MQ=255)
                                 gaagGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccggatgcgacgtttgatgcgtcttatccggct                                                                   <  1:936895‑M1/100‑35 (MQ=255)
                                 gaagGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCg                                                                   <  2:149608/100‑1 (MQ=255)
                                 gaagGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCg                                                                   <  1:1542997/100‑1 (MQ=255)
                                  aagGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccggatgcgacgtttgatgcgtcttatccggctt                                                                  <  2:749101‑M1/100‑36 (MQ=255)
                                  aagGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccggatgcgacgtttgatgcgtcttatccggctt                                                                  <  2:1607527‑M1/100‑36 (MQ=255)
                                      tgtgGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccggatgcgacgtttgatgcgtcttatccggctttcac                                                              <  1:1199784‑M1/100‑40 (MQ=255)
                                      tgtgGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGt                                                              <  1:2405333/100‑1 (MQ=255)
                                       gtgGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAGCGTCGCATCCGGCGAAAGTc                                                             <  1:1583599/100‑1 (MQ=255)
                                       gtgGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTc                                                             <  2:2060876/100‑1 (MQ=255)
                                       gtgGCTGAAGGTGAGAATGGCGTAAGTGTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAgccggatgcgacgtttgatgcgtctgatccggctttca                                                               <  1:1056526‑M1/98‑39 (MQ=255)
                                        tgGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCa                                                            >  1:2325791/1‑100 (MQ=255)
                                         ggCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCaa                                                           >  2:1700549/1‑100 (MQ=255)
                                             gAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAg                                                       >  2:766621/1‑100 (MQ=255)
                                              aaGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAgg                                                      <  1:586132/100‑1 (MQ=255)
                                                  tGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTc                                                  >  2:2119356/1‑100 (MQ=255)
                                                     gaATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCt                                               <  2:1703485/100‑1 (MQ=255)
                                                     gaATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCt                                               >  1:2548041/1‑100 (MQ=255)
                                                         ggCGTAAGTTTTGTCTGGCAGAGAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTacc                                           <  1:1755522/100‑1 (MQ=255)
                                                          gCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTacca                                          >  2:2144442/1‑100 (MQ=255)
                                                              aaGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTaccaccac                                      <  1:523736/100‑1 (MQ=255)
                                                               aGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTaccaccacc                                     <  1:2368779/100‑1 (MQ=255)
                                                                    tGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTAcc                                <  2:229840/100‑1 (MQ=255)
                                                                    tGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTAcc                                <  1:1198283/100‑1 (MQ=255)
                                                                    tGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTAcc                                <  2:222284/100‑1 (MQ=255)
                                                                     gTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCg                               >  2:1589188/1‑100 (MQ=255)
                                                                     gTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCg                               <  2:2564403/100‑1 (MQ=255)
                                                                     gTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCg                               <  2:1880795/100‑1 (MQ=255)
                                                                       cTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTTAATCAGAATTCGCTTACCACCACCGTACCGAt                             >  1:223262/1‑100 (MQ=255)
                                                                       cTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGAt                             >  2:1161869/1‑100 (MQ=255)
                                                                       cTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGAt                             <  2:1826508/100‑1 (MQ=255)
                                                                       cTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGAt                             >  1:2345553/1‑100 (MQ=255)
                                                                         ggCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGAttt                           >  2:243056/1‑100 (MQ=255)
                                                                          gCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTc                          >  1:124435/1‑100 (MQ=255)
                                                                          gCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTc                          <  1:1834637/100‑1 (MQ=255)
                                                                            aGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCg                        >  1:1318789/1‑100 (MQ=255)
                                                                            aGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCg                        >  1:1468100/1‑100 (MQ=255)
                                                                             gAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCgg                       >  1:1894090/1‑100 (MQ=255)
                                                                             gAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCgg                       >  1:1209109/1‑100 (MQ=255)
                                                                             gAAAACGCTGAGTCAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCAGCCTGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCgg                       <  1:1110894/100‑1 (MQ=255)
                                                                              aaaaCGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCggg                      <  2:2278243/100‑1 (MQ=255)
                                                                                aaCGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTg                    <  2:1981692/100‑1 (MQ=255)
                                                                                aaCGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTg                    >  2:1958180/1‑100 (MQ=255)
                                                                                aaCGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTg                    <  2:722207/100‑1 (MQ=255)
                                                                                 aCGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATTCGGCGAAAGTCAATCAGGCTTCGCTTACCACCACCGTACCGATTTCCGGGTg                    <  1:738822/99‑1 (MQ=255)
                                                                                 aCGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTgg                   <  1:308814/100‑1 (MQ=255)
                                                                                    cTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGTTTCGCTTACCACCACCGTACCGATTTCCGGGTGGCt                 <  1:1112366/99‑1 (MQ=255)
                                                                                    cTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCt                 >  2:1035749/1‑99 (MQ=255)
                                                                                       aGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAg             <  1:1220126/100‑1 (MQ=255)
                                                                                          tAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTg          <  2:1054720/100‑1 (MQ=255)
                                                                                           aaGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCGGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTgg         <  1:617036/100‑1 (MQ=255)
                                                                                           aaGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTgg         <  2:1275891/100‑1 (MQ=255)
                                                                                             gTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTa       >  1:501868/1‑100 (MQ=255)
                                                                                              tGAAAGCCGGATCAGACGCATCAAACGTCGCATCCGGCtttcacttaactaagcgttttctgccagacaacacttacgccattctcaccttcagccac        <  1:1056526‑M2/98‑61 (MQ=255)
                                                                                               gAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAAt     <  2:1776748/100‑1 (MQ=255)
                                                                                                 aaGCCGGATAAGACGCATCAAACGTCGCATCCGGCtttcacttaactaagcgttttctgccagacaaaacttacgccattctcaccttcagccacacctt   <  2:1607527‑M2/100‑66 (MQ=255)
                                                                                                 aaGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAAttt   <  2:1477783/100‑1 (MQ=255)
                                                                                                 aaGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAAttt   >  1:751851/1‑100 (MQ=255)
                                                                                                 aaGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAAttt   >  1:2077066/1‑100 (MQ=255)
                                                                                                 aaGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAAttt   <  2:825631/100‑1 (MQ=255)
                                                                                                 aaGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAAttt   <  2:845286/100‑1 (MQ=255)
                                                                                                  aGCCGGATAAGACGCATCAAACGTCGCATCCGGCtttcacttaactaagcgttttctgccagacaaaacttacgccattctcaccttcagccacaccttc  <  1:936895‑M2/100‑67 (MQ=255)
                                                                                                  aGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAAtttt  >  2:295428/1‑100 (MQ=255)
                                                                                                  aGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAAtttt  <  1:1625716/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
CTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAAGTGAAAGCCGGATAAGACGCATCAAACGTCGCATCCGGCGAAAGTCAATCAGGATTCGCTTACCACCACCGTACCGATTTCCGGGTGGCTAAAGCTGGTAATTTT  >  NC_000913/213537‑213734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.