New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	526259 =	NA (NA)	11 (0.130)	5/168	NT	100%	coding (2999/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	526275 =	0 (0.000)					coding (3015/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAT  >  NC_000913/526177‑526374                                                                                                   |                                                                                                    tttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccatttgccgtcccagcgggtcgtagaggtagcggctctCg                                                                                                    <  2:1452773‑M2/2‑1 (MQ=255) tttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCg                                                                                                    <  2:2233678‑M2/2‑1 (MQ=255) tttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCg                                                                                                    <  1:363170‑M2/2‑1 (MQ=255)  ttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGa                                                                                                   <  2:2329555‑M2/3‑1 (MQ=255)  ttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGa                                                                                                   <  2:1537933‑M2/3‑1 (MQ=255)   tacgcgacagcgacatcccccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  <  1:2485316‑M2/4‑1 (MQ=255)   tacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  >  2:2087868‑M2/97‑100 (MQ=255)   tacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  <  2:1273711‑M2/4‑1 (MQ=255)    acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  2:2398956‑M2/5‑1 (MQ=255)     cgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  1:43973‑M2/5‑1 (MQ=255)                                                               ttcgccgtcccagcgggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTgg                                      >  1:1953056‑M2/37‑100 (MQ=255)                                                                        ccagcgggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGAtgtcgctg                             >  2:2077404‑M2/28‑100 (MQ=255)                                                                         cagcgggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGAtgtcgctgt                            >  2:547248‑M2/27‑100 (MQ=255)                                                                            cgggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGAtgtcgctgtcgc                         >  1:361830‑M2/24‑100 (MQ=255)                                                                            cgggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGAtgtcgctgtcgc                         >  1:1826497‑M2/24‑100 (MQ=255)                                                                            cgggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGAtgtcgctgtcgc                         >  2:324662‑M2/24‑100 (MQ=255)                                                                            cgggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGAGACCTGACGGGGTGGAtgtcgctgtcgc                         >  1:2070364‑M2/24‑100 (MQ=255)                                                                              ggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAGACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGgatgtcgctgtgg                          >  1:2364352‑M2/22‑95 (MQ=255)                                                                              ggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGt                       >  1:297443‑M2/22‑100 (MQ=255)                                                                              ggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGt                       >  2:2514578‑M2/22‑100 (MQ=255)                                                                               ntcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTa                      >  2:2270951‑M2/21‑100 (MQ=255)                                                                                                   CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAt  <  2:397012‑M2/100‑1 (MQ=255)                                                                                                   CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAt  <  2:850576‑M2/100‑1 (MQ=255)                                                                                                   |                                                                                                    GAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAT  >  NC_000913/526177‑526374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.