| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1134653 | NA (NA) | 10 (0.120) | 6/164 | NT | NA | noncoding (68/98 nt) | RIP100 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP100 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | = 3598495 | NA (NA) | noncoding (99/99 nt) | RIP259 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP259 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
Only 100 of 141 total aligned reads displayed.
TGCCTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGTGCCAGTCA > NC_000913/3598396‑3598594 | tGCCTGATGCGCTACGCTTATCAGGGCTGCAATGTGTGTTGCAGTTTACTGATTTCTTTGGATCTTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGc < 1:1961943/100‑1 (MQ=25)tGCCTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC < 2:2561739‑M2/100‑1 (MQ=255)tGCCTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC > 1:919717‑M2/1‑100 (MQ=255) gCCTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa > 2:1371648/1‑100 (MQ=255) gCCTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa > 1:2338471/1‑100 (MQ=255) gCCTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa < 2:2057174/100‑1 (MQ=255) ccTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAt < 1:659332/100‑1 (MQ=255) cTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATg < 1:845703/100‑1 (MQ=255) gATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGGAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATGAGGCGTAAACGCCTTATCCGGCctaca > 1:624270‑M2/1‑95 (MQ=255) gATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGaa < 2:1534150/100‑1 (MQ=255) aTGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAg < 2:727245/100‑1 (MQ=255) tGCGCTACGTTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGc < 2:1171229/100‑1 (MQ=255) tGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGc < 2:1996003/100‑1 (MQ=255) cgcTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCaa < 2:2292104/100‑1 (MQ=255) cgcTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCaa > 2:1346624/1‑100 (MQ=255) cTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACg < 1:696170/100‑1 (MQ=255) aCGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTa < 1:86919/100‑1 (MQ=255) aCGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTa < 1:669370/100‑1 (MQ=255) cTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTc < 2:63131/100‑1 (MQ=255) cTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTc > 2:2045130/1‑100 (MQ=255) ttATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCg < 2:469058/100‑1 (MQ=255) aTCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGa > 1:985864/1‑99 (MQ=255) tCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCGTTGGATCTTGTAGGCCGGATAAGCCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGata < 1:1114172/100‑1 (MQ=255) cAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGatat > 2:154764/1‑100 (MQ=255) gCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAg < 2:1696563/100‑1 (MQ=255) cTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCa > 1:1051882/1‑100 (MQ=255) cAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAAtt < 1:1405646/100‑1 (MQ=255) aaTGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAAttt > 2:796946/1‑100 (MQ=255) aTGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTg > 1:1263418/1‑100 (MQ=255) gtgtgtTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTggc > 1:197013/1‑100 (MQ=255) gtgtTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTggcgg < 2:1463638/100‑1 (MQ=255) tgtTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTggcggc < 1:2058894/100‑1 (MQ=255) gtTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCa > 2:1328768/1‑100 (MQ=255) ttGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATGAGCAATTTGGCGGCaa > 1:1511375/1‑100 (MQ=255) tGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAAc > 1:779839/1‑100 (MQ=255) tGCAATTTACTGATCTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCa < 1:2199873/98‑1 (MQ=255) cAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAAccc > 2:88057/1‑100 (MQ=255) cAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAAccc < 1:1683080/100‑1 (MQ=255) ttACTGATTTCTTTGGATCTTGTAGGCCGGGTAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAAGTTGGCGGCAACCCAAAg < 1:1271922/100‑1 (MQ=255) ttACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAg < 2:2543506/100‑1 (MQ=255) tACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGt < 1:1953634/100‑1 (MQ=255) tACTGATTTCTTTGGATCTTGTAGGCCGGATAACGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAg < 1:1255210/99‑1 (MQ=255) cTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTg > 2:1849054/1‑100 (MQ=255) gATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGcc < 2:1430612/100‑1 (MQ=255) gATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGcc > 2:2477948/1‑100 (MQ=255) gATTTCTTTGGATCGTGTAGGCCGGATAAGGCGTTGACGCCGCATCCGGCATGAAGCAACGTACGCGATATTAGCAATTTGGCGGCAACCCAAAGTTGcc > 1:1808434/1‑100 (MQ=255) aTTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTATCAATTTGGCGGCAACCCAAAGTTGcc < 1:273761/99‑1 (MQ=255) tttCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCGCCGTCCGCGATATTATCAATTGGGCCGAAACCCAAAGTTGCCGa > 1:2326295/1‑100 (MQ=21) tCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGAtt < 2:2437391/100‑1 (MQ=255) tCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGAtt > 1:940596/1‑100 (MQ=255) tCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGAtt > 1:2535266/1‑100 (MQ=255) tttGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTaa < 1:227574/100‑1 (MQ=255) tttGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTaa > 1:1294451/1‑100 (MQ=255) tttGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTAGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTaa > 1:642462/1‑100 (MQ=255) ttGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAAt > 2:1406298/1‑100 (MQ=255) ggATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGa > 1:748888/1‑100 (MQ=255) ggATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGa > 2:1262130/1‑100 (MQ=255) gATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGAt > 1:807557/1‑100 (MQ=255) aTCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGAtt > 1:445579/1‑100 (MQ=255) aTCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGAtt > 2:212263/1‑100 (MQ=255) aTCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGAtt > 2:255217/1‑100 (MQ=255) aTCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGAtt < 1:1400671/100‑1 (MQ=255) cTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcat < 1:946291‑M2/100‑64 (MQ=255) ccgatctggataaggcGTTTACGCCGCATCCGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgg > 2:815918‑M2/8‑34 (MQ=255) tatgCCGGATATTGCGTGTCCGCCGCACTCCGCATGAAGCAAAGTACTCGATATTAGCTATTTGGCGTCAACCCAATGTTTCCGATTAATGATTaatacg < 1:2088772/97‑6 (MQ=255) tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCg > 2:1565162/1‑100 (MQ=255) aGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGc > 1:115902/1‑100 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggca < 1:1900830‑M2/100‑70 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAAAGATTACTCCGCa > 2:894607/1‑100 (MQ=255) tccgGATAAGGCGTTTACGCCGCATCCGGCctacaagtgctcgcaaaatcgataacttgcgattgcccccatagacccgataaacttgcgcatcgggcaa < 1:2146119‑M2/99‑71 (MQ=255) ggATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCACCCCAAAGTTGCCGATTAATGATTACTTCGCATc < 1:1686189/98‑1 (MQ=255) ggATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCgg < 1:1910952/100‑1 (MQ=255) gATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGt < 1:1328761/100‑1 (MQ=255) aTAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTc > 1:1537094/1‑100 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaacttata < 2:2210933‑M2/100‑77 (MQ=255) aGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgcc < 2:1644609/100‑1 (MQ=255) cGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccgtg > 1:1087186/1‑100 (MQ=255) cGTTTACGCCGCATCCGGCATGAAGCAACGTACTAGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccgtg > 1:2376062/1‑100 (MQ=255) tttACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccgtgcc < 1:319288/100‑1 (MQ=255) tttACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccgtgcc < 1:992432/100‑1 (MQ=255) tttACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccgtgcc > 2:342324/1‑100 (MQ=255) taaacgccttaTCCGGCATGAAGCAACGTACTCGATATGAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccgtgcc > 1:1595931/11‑100 (MQ=255) tACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccgtgccgt > 1:1710461/1‑100 (MQ=255) tACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCgccgtgccgt > 1:841850/1‑100 (MQ=255) cgccgcATACGGCATGAAGCAACGTGCTCGACATTAGCAATTTGGCGGAAACCCAAAGTTGCCGCTTAATGATTACTCCGCATAGGTCGCCGTGCCGTTg > 1:2475550/1‑100 (MQ=255) ccgcATCCGGCATGAAGCAGCGTCCTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGc < 1:1748141/100‑1 (MQ=255) cgcATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCg < 1:1423269/100‑1 (MQ=255) cATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGTg < 1:353054/100‑1 (MQ=255) aTCCGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaacttatacttgtcatgtatccttt < 2:762275‑M2/100‑94 (MQ=255) ccGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaacttatacttgtcatgtatcctttca > 1:2374162‑M2/1‑5 (MQ=255) ccGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaacttatacttgtcatgtatcctttca > 1:443934‑M2/1‑5 (MQ=255) ccGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaacttatacttgtcatgtatcctttc < 1:1571998‑M2/99‑95 (MQ=255) ccGGCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaacttagacttgtcatgtatcctttc < 2:2031215‑M2/99‑95 (MQ=255) ccGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGTGCCa > 1:857171/1‑100 (MQ=255) ccGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGTGCCa < 2:2316926/100‑1 (MQ=255) ggCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaacttatacttgtcatgtatcctttcaat > 2:1894704‑M2/1‑3 (MQ=255) ggCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaacttatacttgtcatgtatcctttcaat < 1:1196304‑M2/100‑98 (MQ=255) gCctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaacttatacttgtcatgtatcctttcaatt > 2:1027373‑M2/1‑2 (MQ=255) cctacaagtgctcgcaaaatcgataaattgcgattgcccccatagacccgataaacttgcgcatcgggcaacttatacttgtcatgtatcctttcaatta < 2:2288974‑M2/100‑100 (MQ=255) cATGAAGCAGCGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGTGCCAGTCa < 1:1633996/100‑1 (MQ=255) | TGCCTGATGCGCTACGCTTATCAGGCCTACAATGTGTGTTGCAATTTACTGATTTCTTTGGATCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAAGCAACGTACTCGATATTAGCAATTTGGCGGCAACCCAAAGTTGCCGATTAATGATTACTTCGCATCGGTCGCCGTGCCGTTGGCGTGCCAGTCA > NC_000913/3598396‑3598594 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |