New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1269694	71 (0.770)	11 (0.130)	4/166	NT	20.0%	intergenic (‑419/+9)	ldrA/ldrB	toxic polypeptide, small/toxic polypeptide, small
	?	NC_000913	= 1270193	22 (0.260)					intergenic (‑383/+45)	ldrB/ldrC	toxic polypeptide, small/toxic polypeptide, small

GTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTAC  >  NC_000913/1270096‑1270241                                                                                                  |                                                 gTGCTCTGGATGATGCTTCCAGCTCGGGTTTCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTc                                                 >  2:1332245‑M2/1‑98 (MQ=255) gTGCTCTGGATGATGCTTCCAGCTCGGGTGGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcg                                                >  1:1544985‑M2/1‑98 (MQ=255)  tGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgg                                               >  1:2541306‑M2/1‑97 (MQ=255)  tGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgg                                               >  2:272667‑M2/1‑97 (MQ=255)   gCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcggg                                              <  2:1475255‑M2/100‑5 (MQ=255)    ctctGGGTGATGCTTCCAGCTCGGGTGGCCAATATTTACTTGTGGAAGAGATAAAGACAAAGATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggc                                             >  1:869257‑M2/1‑95 (MQ=255)     tctGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGCGATAAAGCCAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggc                                             >  2:1288800‑M2/1‑94 (MQ=255)     tctGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcg                                            >  2:1076019‑M2/1‑94 (MQ=255)     tctGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACGTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcg                                            >  2:1217829‑M2/1‑94 (MQ=255)       tGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCa                                          <  2:2355890/100‑1 (MQ=38)        ggATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCat                                         >  2:1209963/1‑100 (MQ=38)            gaggCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTg                                     <  1:72297/97‑1 (MQ=11)              tgCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCCGCGGCCGGTTTCGGGCGCATATTGcc                                   >  2:2570406/1‑100 (MQ=25)               gCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa                                  >  2:670438/1‑100 (MQ=32)                nttCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCACGCTGTTACACCTACGGCCGATTTCGAGCGCata                                        >  1:671661/2‑93 (MQ=11)                   ccAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCAc                              >  2:1971242/1‑100 (MQ=33)                    cAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACg                             >  2:606932/1‑100 (MQ=32)                    cAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACg                             >  1:2339405/1‑100 (MQ=33)                          gtgTTGCCAATATTTACTTGTGGAAGAGATAAAGTCAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGGGTCGGGCGCATATTGCCATCACGGCAGc                        <  1:149979/97‑1 (MQ=11)                          gggTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGcc                       <  1:1209959/100‑1 (MQ=33)                           ggTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCGGCAGGCTATTACCTGTGAGGCAGGATTCGTGCGCATATTGCCATCACGGCAGCCt                      >  1:589709/1‑100 (MQ=11)                           ggTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCt                      >  2:22480/1‑100 (MQ=33)                              tGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgcatattgccgtgatggcaatatgcg                   >  2:780204‑M2/1‑69 (MQ=255)                                ccAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgcatattgccgtgatggcaatatgcg                   >  2:780177‑M2/1‑67 (MQ=255)                                ccAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc                 >  2:2441611/1‑100 (MQ=33)                                  aaTATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgccc               >  2:799255‑M2/1‑65 (MQ=255)                                  aaTATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGccc               <  1:2032897/100‑1 (MQ=33)                                       ttACTTGTGGGAGAGATTAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccgaaac          >  2:595723‑M2/1‑60 (MQ=255)                                       ttACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccgaaac          >  1:1334056‑M2/1‑60 (MQ=255)                                       ttACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccgaaac          >  2:922360‑M2/1‑60 (MQ=255)                                       ttACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGtttt          >  1:1419339/1‑100 (MQ=33)                                       ttACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGtttt          <  2:603992/100‑1 (MQ=33)                                        tACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccgaaacc         >  2:26351‑M2/1‑59 (MQ=255)                                        tACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccgaaacc         >  1:1195262‑M2/1‑59 (MQ=255)                                        tACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTc         >  2:229415/1‑100 (MQ=32)                                         aCTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccg        >  1:184524‑M2/1‑58 (MQ=255)                                         aCTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccg        >  1:1284318‑M2/1‑58 (MQ=255)                                          cTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCAc       <  2:1236103/100‑1 (MQ=33)                                           ttGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggc      >  1:1916995‑M2/1‑56 (MQ=255)                                           ttGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCAcc      <  1:538710/100‑1 (MQ=33)                                           ttGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCAcc      <  2:828990/100‑1 (MQ=33)                                             gtgGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCtt    >  1:834338/1‑100 (MQ=32)                                              tgGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTa   >  2:90610/1‑100 (MQ=33)                                               ggAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTAc  >  1:141697/1‑100 (MQ=33)                                               ggAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACAACTGCGGCAGGTTTCGGGCGCATATTGCAATCACGGAAGCCTGACGCCCGTTTTCGCCTTAc  >  1:2298971/1‑100 (MQ=11)                                                                                                  |                                                 GTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTAC  >  NC_000913/1270096‑1270241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.