New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 199269574 (0.810)14 (0.170) 7/162 NT 18.0% coding (123/549 nt) pgsA phosphatidylglycerophosphate synthetase
?NC_000913 = 1992709 60 (0.720)coding (109/549 nt) pgsA phosphatidylglycerophosphate synthetase

Only 100 of 101 total aligned reads displayed.

ACAGGGTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGACACGGAACAGTGTAAGCAACGTAGGGATATT  >  NC_000913/1992612‑1992808
                                                                                                 |                                                                                                   
acaGGGTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGcg                                                                                                   >  2:2401479‑M2/1‑98 (MQ=255)
   gggTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGcgcgg                                                                                                >  1:1633371‑M2/1‑95 (MQ=255)
     gTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGcgcggcg                                                                                              <  2:2516941‑M2/100‑8 (MQ=255)
      tCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGcgcggcgg                                                                                             >  1:1341067‑M2/1‑92 (MQ=255)
      ctgttccgtgtcatccttatcccattctttgtattggtcttttatctgcctgtcacctggtcgccgtttgCCGCCGCGACGCAGAAAATGAGCGcggcgg                                                                                             >  1:1302037‑M1/71‑100 (MQ=255)
       tgttccgtgtcatccttatcccattctttgtattggtcttttatctgcctgtcacctggtcgccgtttgCCGCCGCGACGCAGAAAATGAGCGCggcggc                                                                                            >  2:129718‑M1/70‑100 (MQ=255)
       tgttccgtgtcatccttatcccattctttgtattggtcttttatctgcctgtcacctggtcgccgtttgCCGCCGCGACGCAGAAAATGAGCGCggcggc                                                                                            >  2:2365440‑M1/70‑100 (MQ=255)
       tgttccgtgtcatccttatcccattctttgtattggtcttttatctgcctgtcacctggtcgccgtttgCCGCCGCGACGCAGAAAATGAGCGCggcggc                                                                                            >  2:794091‑M1/70‑100 (MQ=255)
       tgttccatgtcatccttctcccattctttgtattggtcttttatctgcccgtcacctggtcgccgtttgCCGCCGCGACGCAGAAAATGAGCGCggcggc                                                                                            >  1:2585054‑M1/70‑100 (MQ=255)
       tgctccgtgtcatccttatcgccttctttgtattagtcttttatctgcctgtcacctggtcgccgtttgCCGCCGCGACGCAGAAAAGGAGCGCggcggc                                                                                            >  1:505847‑M1/70‑100 (MQ=255)
       cAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCggcggc                                                                                            >  2:897906/1‑100 (MQ=255)
        gttccgtgtcatccttatcccattctttgtattggtcttttatctgcctgtcacctggtcgccgtttaCCGCCGCGACGCAGAAAATGAGCGCGGCGGCa                                                                                           >  2:731238‑M1/69‑100 (MQ=255)
        aaGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCa                                                                                           >  1:901594/1‑100 (MQ=255)
          tccgtgtcatccttatcccattctttgtattggtcttttatctgcctgtcacctggtcgccgtttgCCGCCGCCACGCAGAAAATGAGCGCGGCGGCaaa                                                                                         >  2:1574664‑M1/67‑100 (MQ=255)
          ggAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCaaa                                                                                         <  2:843541/100‑1 (MQ=255)
           gAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAAc                                                                                        <  2:2567407/100‑1 (MQ=255)
             gtgtcatccttatcccattctttgtattggtcttttatctgcctgtcacctggtcgccgtttgCCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACgg                                                                                      >  1:1000435‑M1/64‑100 (MQ=255)
              aGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGc                                                                                     <  2:1238536/100‑1 (MQ=255)
               gCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGc                                                                                     <  1:1130537/99‑1 (MQ=255)
               gCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCg                                                                                    <  1:1586667/100‑1 (MQ=255)
                cACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGa                                                                                   <  2:2571843/100‑1 (MQ=255)
                cACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGa                                                                                   >  2:1655004/1‑100 (MQ=255)
                cACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGa                                                                                   >  2:89835/1‑100 (MQ=255)
                  ccAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGAcc                                                                                 >  2:1124542/1‑100 (MQ=255)
                    aaaCCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAg                                                                               >  2:1657768/1‑100 (MQ=255)
                    aaaCCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAg                                                                               >  2:2402595/1‑100 (MQ=255)
                     aaCCGGGTACTCTAGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAgg                                                                              >  1:1602958/1‑100 (MQ=255)
                      aCCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGt                                                                             >  1:350119/1‑100 (MQ=255)
                      aCCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACAGCGACCAgg                                                                              >  1:596217/1‑99 (MQ=255)
                       ccGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTg                                                                            >  1:2015312/1‑100 (MQ=255)
                         gggTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGAc                                                                          <  2:252927/100‑1 (MQ=255)
                          ggTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACa                                                                         <  1:897903/100‑1 (MQ=255)
                              ctctGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCa                                                                     >  1:256026/1‑100 (MQ=255)
                              ctctGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCa                                                                     >  1:304177/1‑100 (MQ=255)
                               tctGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAg                                                                    >  2:1831973/1‑100 (MQ=255)
                                ctGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGa                                                                   >  1:2271004/1‑100 (MQ=255)
                                 tGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGAt                                                                  >  1:2530342/1‑100 (MQ=255)
                                 tGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGAt                                                                  >  2:851896/1‑100 (MQ=255)
                                   gTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATaa                                                                >  2:268193/1‑100 (MQ=255)
                                    ttCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATaaa                                                               <  2:1219712/100‑1 (MQ=255)
                                      ccAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAg                                                             <  1:113564/100‑1 (MQ=255)
                                      ccAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAg                                                             <  2:399090/100‑1 (MQ=255)
                                      ccAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAg                                                             <  2:399004/100‑1 (MQ=255)
                                      ccAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAg                                                             >  2:305677/1‑100 (MQ=255)
                                      ccAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAg                                                             <  2:1471859/100‑1 (MQ=255)
                                         gcggcgTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGAcc                                                          <  1:696003/100‑1 (MQ=255)
                                         gcggcgTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCAGCAAACGGCGACCAGGTGACAGGCAGATAAAAGAcc                                                          >  1:1203829/1‑100 (MQ=255)
                                          cggcgTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCa                                                         <  2:1331887/100‑1 (MQ=255)
                                           ggcgTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCaa                                                        <  1:62909/100‑1 (MQ=255)
                                             cgTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATa                                                      <  2:1641923/100‑1 (MQ=255)
                                             cgTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATa                                                      <  2:1319254/100‑1 (MQ=255)
                                             cgTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGAGAAAAGACCAATa                                                      <  2:1697033/100‑1 (MQ=255)
                                             cgTGCCAGAAAACCATCGAACCAGTCAGTACCCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATa                                                      <  2:711143/100‑1 (MQ=255)
                                               tGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACa                                                    <  1:1611952/100‑1 (MQ=255)
                                                ggcAGAAAACCATCGCACCAGCCAGGCAACGCCGCGACGCAGACAATGAACACGGCAGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATAc                                                     <  1:1271827/96‑1 (MQ=255)
                                                gCCAGGAAACCATCGAACCAGTCAGTCACCGGCTCGGCGCAGAAAATCTGCGCGGCGGCCAACGGCCACCAGGGGACACGCCGGTAAAAGACCAATACaa                                                   >  1:1468345/1‑100 (MQ=255)
                                                gCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACaa                                                   >  2:1476052/1‑100 (MQ=255)
                                                gCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACaa                                                   <  2:1247256/100‑1 (MQ=255)
                                                  cAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAg                                                 >  2:1625695/1‑100 (MQ=255)
                                                  cAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAg                                                 >  2:2405955/1‑100 (MQ=255)
                                                   aGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGa                                                >  2:1180665/1‑100 (MQ=255)
                                                    gAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGaa                                               >  2:184770/1‑100 (MQ=255)
                                                      aaaCCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATg                                             >  2:685006/1‑100 (MQ=255)
                                                         ccATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGa                                          >  1:1533802/1‑100 (MQ=255)
                                                         ccATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGa                                          <  2:2020583/100‑1 (MQ=255)
                                                           aTCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATa                                        >  2:2088394/1‑100 (MQ=255)
                                                              gAACCAGTCAGTCACCGCCGCGACGCAGAAAATGCGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAgg                                     <  1:1364656/100‑1 (MQ=255)
                                                                aCCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGAt                                   >  1:2426207/1‑100 (MQ=255)
                                                                 ttccgatctcaCCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATg                                  <  2:503652/92‑1 (MQ=255)
                                                                  cagtcagtCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGa                                 <  1:2010781/100‑1 (MQ=255)
                                                                  cagtcagtCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGa                                 >  1:111601/1‑100 (MQ=255)
                                                                   agtctgtcACCGCCGCGACGCAGAAAATGAGcgcggcggtgactgactggttcgatggttttctggcacgccgctggaaccagagtacccggtttggtgc                                <  1:724104‑M2/100‑70 (MQ=255)
                                                                   agtctgtcACCGCCGCGACGCAGAAAATGAGcgcggcggtgactgactggttcgatggttttctggcacgccgctggaaccagagtacccggtttggtg                                 <  1:724191‑M2/99‑69 (MQ=255)
                                                                   agtcagtcACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGac                                <  1:475675/100‑1 (MQ=255)
                                                                      cagtcaCCACCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGACACg                             <  2:578434/100‑1 (MQ=255)
                                                                        gtcaCCGCCGCGACGCAGAAAATGAGcgcggcggtgagtgactggttcgatggttttctggcacgccgctggaaccagagtacccggtttggtgctttcc                           <  1:1380494‑M2/100‑75 (MQ=255)
                                                                         tcaCCGCCGCGACGCAGAAAATGAGcgcggcggtgactgactggttcgatggttttctggcacgccgctggaaccagagtacccggtttggtgctttcct                          <  2:2500378‑M2/100‑76 (MQ=255)
                                                                          caCCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGagatcggaa                         >  1:503650/1‑92 (MQ=255)
                                                                          caCCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGACACGGAAc                         <  2:813642/100‑1 (MQ=255)
                                                                           aCCGCCGCGACGCAGAAAATGAGcgcggcggtgactgactggttcgatggttttctggcacgccgctggaaccagagtacccggtttggtgctttccttg                        <  1:729694‑M2/100‑78 (MQ=255)
                                                                           aCCGCCGCGACGCAGAAAATGAGcgcggcggtgactgactggttcgatggttttctggcacgccgctggaaccagagtacccggtttggtgctttccttg                        <  2:2541435‑M2/100‑78 (MQ=255)
                                                                           aCCGCCGCGACGCAGAAAATGAGcgcggcggtgactgactggttcgatggttttctggcacgccgctggaaccagagtacccgggttggtgctttccttg                        <  2:1026358‑M2/100‑78 (MQ=255)
                                                                            ccgccgCGACGCAGAAAATGAGcgcggcggtgactgactggttcgatggttttctggcacgccgctggaaccagagtacccggtttggtgctttccttga                       <  1:84991‑M2/100‑79 (MQ=255)
                                                                            ccgccgCGACGCAGAAAATGAGcgcggcggtgactgactggttcgatggttttctggcacgccgctggaaccagagtacccggtttggtgctttccttga                       <  2:2340057‑M2/100‑79 (MQ=255)
                                                                            CCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGACACGGAACAg                       <  2:125217‑M1/100‑1 (MQ=255)
                                                                             cgccgcGACGCAGAAAATGAGcgcggcggtgactgactggttcgatggttttctggcacgccgctggaaccagagtacccggtttggtgctttccttgac                      <  2:2079502‑M2/100‑80 (MQ=255)
                                                                              gccgcGACGCAGAAAATGAGcgcggcggtgactgactggttcgatggttttctggcacgccgctggaaccagagtacccggtttggtgctttccttgacc                     <  2:2539483‑M2/100‑81 (MQ=255)
                                                                              gccgcGACGCAGAAAATGAGcgcggcggtgactgactggttcgatggttttctggcacgccgctggaaccagagtacccggtttggtgctttccttgacc                     <  2:432007‑M2/100‑81 (MQ=255)
                                                                              gccgcGACGCAGAAAATGAGcgcggcggtgactgactggttcgatggttttctggcacgccgctggaaccagagtacccggtttggtgctttccttgacc                     <  1:587377‑M2/100‑81 (MQ=255)
                                                                              gccgcGACGCAGAAAATGAGcgcggcggtgactgactggttcgatggttttctggcacgccgctggaaccagagtacccggtttggtgctttccttga                       <  1:1490792‑M2/98‑79 (MQ=255)
                                                                                CGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGACACGGAACAGTGTa                   <  1:1899277‑M1/100‑1 (MQ=255)
                                                                                 GCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACGAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGACACGGAACAGTGTa                   >  1:1566110‑M1/1‑99 (MQ=255)
                                                                                 GCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGACACGGAACAGTGTaa                  >  2:2141295‑M1/1‑100 (MQ=255)
                                                                                        aGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGACACGGAACAGTGTAAGCAACGt           >  1:739187/1‑100 (MQ=255)
                                                                                          aaaaTGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGACACGGAACAGTGTAAGCAACGTAg         <  2:350121/100‑1 (MQ=255)
                                                                                             aTGAGcgcggcggtgactgactggttcgatggttttctggcacgccgctggaaccagagtacccggtttggtgctttccttgaccctgtggcagataaag      >  1:2539464‑M2/1‑5 (MQ=255)
                                                                                             aTGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGAAGATAAAAGACGAGTACCAAGAATGGGATAAGGATGCCACGGAACAGTGTAAGCAACGTAGGGa      <  1:2142780/100‑1 (MQ=255)
                                                                                               gAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGACACGGAACAGTGTAAGCAACGTAGGGata    <  1:2178645/100‑1 (MQ=255)
                                                                                               gAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGAGAAGGATGACACGGAACAGTGTAAGCAACGTAGGGata    <  1:786126/100‑1 (MQ=255)
                                                                                                 gcgcGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGACACGGAACAGTGTAAGCAACGTAGGGATAtt  >  2:890156/1‑100 (MQ=255)
                                                                                                 |                                                                                                   
ACAGGGTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCAGGTGACAGGCAGATAAAAGACCAATACAAAGAATGGGATAAGGATGACACGGAACAGTGTAAGCAACGTAGGGATATT  >  NC_000913/1992612‑1992808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.