New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2393130 =NA (NA)15 (0.170) 9/170 NT NA intergenic (‑89/+75) nuoM/nuoL NADH:ubiquinone oxidoreductase, membrane subunit M/NADH:ubiquinone oxidoreductase, membrane subunit L
?NC_000913 2393163 = NA (NA)noncoding (33/36 nt) REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 121 total aligned reads displayed.

GTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATGGATGC  >  NC_000913/2393065‑2393261
                                                                                                  |                                                                                                  
gTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                                                                                                   <  2:723799/100‑1 (MQ=255)
gTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                                                                                                   >  1:227092/1‑100 (MQ=255)
gTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                                                                                                   <  2:385337/100‑1 (MQ=255)
gTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                                                                                                   >  2:408194/1‑100 (MQ=255)
  ctgttgatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                                                                                                   >  1:1073591‑M1/64‑98 (MQ=255)
  ctgttgatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACg                                                                                                >  2:1211650‑M1/64‑100 (MQ=255)
  cccGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTAc                                                                                                 >  2:672518/1‑100 (MQ=255)
  cccGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTAc                                                                                                 >  2:8342/1‑100 (MQ=255)
     ttgatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGtt                                                                                              >  1:1263240‑M1/61‑100 (MQ=255)
     ttgatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGtt                                                                                              >  1:1263269‑M1/61‑100 (MQ=255)
       gatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                                                                                            >  1:578399‑M1/59‑100 (MQ=255)
       cAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                                                                                            <  2:1878125/100‑1 (MQ=255)
          gACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtat                                                                                         <  1:1627236/100‑1 (MQ=255)
          gACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                                                          <  1:2249778/99‑1 (MQ=255)
           aCCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtata                                                                                        <  1:2457952/100‑1 (MQ=255)
            ccGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTatat                                                                                       >  1:661111/1‑100 (MQ=255)
             actgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                                                                      >  1:2047889‑M1/53‑100 (MQ=255)
             actgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                                                                      >  2:1773224‑M1/53‑100 (MQ=255)
              ggATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGc                                                                                     >  2:2052286/1‑100 (MQ=255)
              ctgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGc                                                                                     >  1:2157756‑M1/52‑100 (MQ=255)
               gATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGcc                                                                                    <  2:919835/100‑1 (MQ=255)
                     cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                                                              >  1:1437409/1‑100 (MQ=255)
                     cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                                                              <  1:960578/100‑1 (MQ=255)
                         gAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAAt                                                                          <  2:1940880/100‑1 (MQ=255)
                            ttCTCACGACAGAAAATTCTCTTCGGACTGTGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTGTCCGACCTACGTTCTTATCTGCCCAGGGGCAAt                                                                          >  1:2334016/1‑97 (MQ=255)
                            ttCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATccc                                                                       >  2:1846753/1‑100 (MQ=255)
                             tctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATccc                                                                       <  1:367637/99‑1 (MQ=255)
                              ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                                                     >  1:1002269/1‑100 (MQ=255)
                              ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                                                     <  1:765935/100‑1 (MQ=255)
                              ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                                                     >  2:1449824/1‑100 (MQ=255)
                              ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                                                     <  2:1419496/100‑1 (MQ=255)
                               tcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcaca                                                                    <  2:1414054/100‑1 (MQ=255)
                                cACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACaa                                                                   >  2:1227338/1‑100 (MQ=255)
                                cACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACaa                                                                   <  1:1215787/100‑1 (MQ=255)
                                  cGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATc                                                                 >  1:1468070/1‑100 (MQ=255)
                                   gACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATcc                                                                <  1:1117079/100‑1 (MQ=255)
                                    aCAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAAGCGACTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCAACAATCCt                                                               >  1:2147014/1‑100 (MQ=255)
                                     cAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCtt                                                              >  2:492882/1‑100 (MQ=255)
                                      aGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTa                                                             >  1:2213686/1‑100 (MQ=255)
                                      aGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTa                                                             <  2:2367540/100‑1 (MQ=255)
                                       gAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTaa                                                            >  2:1245435/1‑100 (MQ=255)
                                       gAAAAGTCTCTTCGGACTGTGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTaa                                                            <  1:504517/100‑1 (MQ=255)
                                        aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGTGCAATCCCACAATCCTTaan                                                           <  1:1579720/100‑2 (MQ=255)
                                        aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                                                           <  2:2116022/100‑1 (MQ=255)
                                         aaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACt                                                          >  2:1775927/1‑100 (MQ=255)
                                            ttCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCaa                                                       <  2:1163553/100‑1 (MQ=255)
                                             tctcTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAAc                                                      <  2:649300/100‑1 (MQ=255)
                                              ctctTCGGACTGGGTGTTGTGTCTGGTGCACCGCGAAGGCGGTTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                                                           <  1:2171148/94‑1 (MQ=255)
                                                ctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCACCGCa                                                   >  2:52723/1‑100 (MQ=255)
                                                ctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCa                                                   >  1:2355673/1‑100 (MQ=255)
                                                 ttCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAg                                                  <  1:2242258/100‑1 (MQ=255)
                                                 gcatataagaacgtaggtcggataagccgccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAg                                                  >  1:2157756‑M2/50‑100 (MQ=255)
                                                  catataagaacgtaggtcggataagccgccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGt                                                 >  2:1773224‑M2/49‑100 (MQ=255)
                                                  catataagaacgtaggtcggataagccgccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGt                                                 >  1:2047889‑M2/49‑100 (MQ=255)
                                                    ggACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTAc                                               >  1:420950/1‑100 (MQ=255)
                                                     gACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTAc                                               <  1:1645451/99‑1 (MQ=255)
                                                        tGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATc                                           <  2:1043491/100‑1 (MQ=255)
                                                        agaacgtaggtcggataagccgccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATc                                           >  1:578399‑M2/43‑100 (MQ=255)
                                                         nggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa                                          >  2:1135690/2‑100 (MQ=255)
                                                         gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa                                          <  1:655049/100‑1 (MQ=255)
                                                          aacgtaggtcggataagccgccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCaa                                         >  1:1263240‑M2/41‑100 (MQ=255)
                                                          aacgtaggtcggataagccgccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCaa                                         >  1:1263269‑M2/41‑100 (MQ=255)
                                                           gggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAAc                                        <  2:1579788/100‑1 (MQ=255)
                                                            ggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACa                                       >  2:2086965/1‑100 (MQ=255)
                                                               aggtcggataagccgccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAg                                      >  1:1073591‑M2/36‑98 (MQ=255)
                                                               agTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTg                                    <  2:2037032‑M1/98‑1 (MQ=255)
                                                                 tgtCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGcc                                  <  1:2246241/100‑1 (MQ=255)
                                                                  gtcggataagccgccttcgcggtgcatccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCa                                 >  1:1002612‑M2/33‑100 (MQ=255)
                                                                  gtcggataagccgccttcgcggtgcatccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCa                                 >  1:267925‑M2/33‑100 (MQ=255)
                                                                  gtcggataagccgccttcgcggtgcatccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCa                                 >  2:136168‑M2/33‑100 (MQ=255)
                                                                  gtCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCa                                 >  2:2281051/1‑100 (MQ=255)
                                                                  gtCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCa                                 <  2:1056499/100‑1 (MQ=255)
                                                                    ggataagccgccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGc                               >  2:1479430‑M2/31‑100 (MQ=255)
                                                                    ggataagccgccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGc                               >  1:993040‑M2/31‑100 (MQ=255)
                                                                     ggataagccgccttcgcggtgcatccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGAAGTACCATCAACAGTGCCAGca                              >  2:661628‑M2/30‑100 (MQ=255)
                                                                       aTGCACCGCGAAGGCGGCTTATCCGACTTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcacc                            <  1:2584510/100‑1 (MQ=255)
                                                                        tGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcacca                           <  2:852335/100‑1 (MQ=255)
                                                                         gCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcaccac                          >  1:97551/1‑100 (MQ=255)
                                                                          cACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACg                         >  2:2597/1‑100 (MQ=255)
                                                                           aCCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGa                        >  2:1287564/1‑100 (MQ=255)
                                                                             cgcgAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGAcc                      <  2:218610/100‑1 (MQ=255)
                                                                             cgcgAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGAcc                      <  1:861771/100‑1 (MQ=255)
                                                                              gcgAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCg                     <  2:1549899/100‑1 (MQ=255)
                                                                              gcgAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCg                     >  1:2540541/1‑100 (MQ=255)
                                                                                gAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCa                   <  2:2195736/100‑1 (MQ=255)
                                                                                 aaGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCAc                  <  1:353067/100‑1 (MQ=255)
                                                                                  aGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCAcc                 <  1:1870017/100‑1 (MQ=255)
                                                                                  aGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCAcc                 <  1:579316/100‑1 (MQ=255)
                                                                                     cggcTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGAt              >  1:806987/1‑100 (MQ=255)
                                                                                      ggcTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATg             >  2:2055732/1‑100 (MQ=255)
                                                                                      ggcTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTCAACTCAACGCACTACCATCAACAGTGCCAGCACCACGACCGCACCGATg             >  1:891734/1‑100 (MQ=255)
                                                                                       gcTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGc            <  2:2207408/100‑1 (MQ=255)
                                                                                       gcTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGc            >  2:633971/1‑100 (MQ=255)
                                                                                            tCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATg       <  2:1432952/100‑1 (MQ=255)
                                                                                            tCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATg       <  2:1432881/100‑1 (MQ=255)
                                                                                             ccGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATgg      <  2:935285/100‑1 (MQ=255)
                                                                                              cGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATGGa     >  1:705960/1‑100 (MQ=255)
                                                                                                aCCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATGGATg   <  1:2281036/100‑1 (MQ=255)
                                                                                                 ccTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATGGATGc  <  1:2086951/100‑1 (MQ=255)
                                                                                                 ccTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATGGATGc  <  1:620443/100‑1 (MQ=255)
                                                                                                  |                                                                                                  
GTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATGGATGC  >  NC_000913/2393065‑2393261

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.