New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 253370575 (0.820)15 (0.180) 7/162 NT 16.6% intergenic (+325/‑59) cysK/ptsH cysteine synthase A, O‑acetylserine sulfhydrolase A subunit/phosphohistidinoprotein‑hexose phosphotransferase component of PTS system (Hpr)
?NC_000913 = 2533719 82 (0.980)intergenic (+339/‑45) cysK/ptsH cysteine synthase A, O‑acetylserine sulfhydrolase A subunit/phosphohistidinoprotein‑hexose phosphotransferase component of PTS system (Hpr)

Only 100 of 112 total aligned reads displayed.

GTCAACACCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCTGCACACCCGCCCTG  >  NC_000913/2533620‑2533818
                                                                                                   |                                                                                                   
gccAACGCCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTa                                                                                                     <  1:2259644/98‑1 (MQ=255)
 tCAACACCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAg                                                                                                    >  2:1856737‑M2/1‑99 (MQ=255)
    acacCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAGCCGCCAGGCTAga                                                                                                   <  1:636956‑M2/98‑3 (MQ=255)
     cacCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAgactt                                                                                                <  1:877957‑M2/100‑6 (MQ=255)
      acCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAgacttt                                                                                               >  2:16198‑M2/1‑94 (MQ=255)
       cccGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAgacttta                                                                                              >  2:2030455‑M2/1‑93 (MQ=255)
       cccGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAgacttta                                                                                              >  1:1735140‑M2/1‑93 (MQ=255)
         cGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGt                                                                                            >  2:729423/1‑100 (MQ=255)
             aGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCca                                                                                        <  2:1054384/100‑1 (MQ=255)
              gCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCcac                                                                                       <  2:1855963/100‑1 (MQ=255)
              gCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCcac                                                                                       >  2:1279768/1‑100 (MQ=255)
                 aTGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCacaac                                                                                    <  2:190709/100‑1 (MQ=255)
                  tGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCacaaca                                                                                   >  2:772856/1‑100 (MQ=255)
                   ggACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAacac                                                                                  >  1:165231/1‑100 (MQ=255)
                   ggACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAacac                                                                                  <  2:1910301/100‑1 (MQ=255)
                   ggACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAacac                                                                                  >  2:293858/1‑100 (MQ=255)
                      cTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTaa                                                                               >  2:2305833/1‑100 (MQ=255)
                      cTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTaa                                                                               >  2:2378689/1‑100 (MQ=255)
                       tGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTaaa                                                                              <  2:2192947/100‑1 (MQ=255)
                        gTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAAc                                                                             >  2:1280642/1‑100 (MQ=255)
                        gTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAAc                                                                             <  1:102950/100‑1 (MQ=255)
                             gcgcTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCtata                                                                        >  2:2430808/1‑100 (MQ=255)
                             gcgcTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCtata                                                                        <  1:2226809/100‑1 (MQ=255)
                               gcTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAg                                                                      <  1:2080264/100‑1 (MQ=255)
                                    tCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTggg                                                                 <  1:563226/100‑1 (MQ=255)
                                      gTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGa                                                               <  1:1059660/100‑1 (MQ=255)
                                      gTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGa                                                               <  1:2494075/100‑1 (MQ=255)
                                        gcgtcgcgtcTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGaaa                                                             <  2:1295218/100‑1 (MQ=255)
                                         cgtcggatcTGTTAAAAACTGGCGCTAACAATATAGGCTAAAGTCTAACCGCCAGGCTACACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGa                                                               <  1:251410/97‑1 (MQ=255)
                                         cgtcgcgtcTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAAt                                                            <  2:1174160/100‑1 (MQ=255)
                                             gcgtcTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACaa                                                        <  2:1867659/100‑1 (MQ=255)
                                               gtcTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATg                                                      >  1:1225060/1‑100 (MQ=255)
                                                tcTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGt                                                     >  2:1222325/1‑100 (MQ=255)
                                                  tGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgacgcacga                                                   <  2:2412932‑M2/100‑51 (MQ=255)
                                                  tGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTc                                                   >  2:2590371/1‑100 (MQ=255)
                                                  tGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTc                                                   >  2:92599/1‑100 (MQ=255)
                                                   nttAAAAACTGGCGCTACCAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACATATAAGTTGGGGAAATACAATGATcc                                                  >  1:1082963/2‑100 (MQ=255)
                                                   gTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTcc                                                  >  2:2112770/1‑100 (MQ=255)
                                                   gTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTcc                                                  >  1:1420645/1‑100 (MQ=255)
                                                   gTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTcc                                                  >  2:2035675/1‑100 (MQ=255)
                                                   gTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACCAAACCTATAAGTTGGGGAAATACAATGTTcc                                                  <  2:282092/100‑1 (MQ=255)
                                                    ttAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCa                                                 >  2:2350485/1‑100 (MQ=255)
                                                     tAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAg                                                <  2:921082/100‑1 (MQ=255)
                                                     tAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTACAg                                                >  1:675897/1‑100 (MQ=255)
                                                       aaaaCTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCa                                              >  2:490633/1‑100 (MQ=255)
                                                          aCTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGATGGGGAAATACAATGTTCCAGCaaga                                           >  2:253825/1‑100 (MQ=255)
                                                              gcgcTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGtt                                       >  1:172464/1‑100 (MQ=255)
                                                              gcgcTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGtt                                       <  1:1937928/100‑1 (MQ=255)
                                                               cgcTAACAATACAGGCTAATGTCGAACCCCCAGGCTAGACTTTAGTTCCACAACACTACACCTATAAGTTTGGGAAATACAATGTTCCAGCAAGAAGTTa                                      >  1:996474/1‑100 (MQ=255)
                                                               cgcTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTa                                      >  1:1195899/1‑100 (MQ=255)
                                                                gcTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTAc                                     >  2:2037080/1‑100 (MQ=255)
                                                                gcTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTAc                                     <  1:1058664/100‑1 (MQ=255)
                                                                 cTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTAcc                                    <  1:2541889/100‑1 (MQ=255)
                                                                 cTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTAcc                                    <  2:1395046/100‑1 (MQ=255)
                                                                        tACAGGCTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgacgcacgaagagcgcaatacagtccattgc                             <  2:342218‑M2/100‑73 (MQ=255)
                                                                        tACAGGCTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgacgcacgaagagcgcaatacagtccattgc                             <  2:169966‑M2/100‑73 (MQ=255)
                                                                        tACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTCGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCg                             <  1:1592214/100‑1 (MQ=255)
                                                                          cAGGCTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgacgcacgaagagcgcaatacagtccattgctg                           <  2:1789383‑M2/100‑75 (MQ=255)
                                                                          cAGGCTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgacgcacgaagagcgcaatacagtccattgctg                           <  2:1855605‑M2/100‑75 (MQ=255)
                                                                          cAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCt                           >  2:848278/1‑100 (MQ=255)
                                                                          cAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCt                           >  2:2574693/1‑100 (MQ=255)
                                                                          cAGGCTAAAGGCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCt                           <  1:691050/100‑1 (MQ=255)
                                                                           gggCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTc                          >  2:520122/2‑100 (MQ=255)
                                                                           aGGCTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgacgcacgaagagcgcaatacagtccattgctgg                          <  2:81179‑M2/100‑76 (MQ=255)
                                                                            ggCTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgacgcacgaagagcgcaatacagtccattgctggc                         <  2:1136239‑M2/100‑77 (MQ=255)
                                                                            ggCTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgacgcacgaagagcgcaatacagtccattgctggc                         <  2:1594831‑M2/100‑77 (MQ=255)
                                                                            ggCTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgacgcacgaagagcgcaatacagtccattgctggc                         <  2:915711‑M2/100‑77 (MQ=255)
                                                                            ggCTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgacgcacgaagagcgcaatacagtccattgctggc                         <  1:785127‑M2/100‑77 (MQ=255)
                                                                            ggCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTcc                         <  2:1798228/100‑1 (MQ=255)
                                                                            ggCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTcc                         >  2:471209/1‑100 (MQ=255)
                                                                             gCTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgacgcacgaagagcgcactacagtccattgctggcg                        <  1:1524159‑M2/100‑78 (MQ=255)
                                                                             gCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCg                        <  2:1195903/100‑1 (MQ=255)
                                                                              cTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgaggcacgaagagcgcagtagagtccagggctggcg                        <  1:268205‑M2/99‑78 (MQ=255)
                                                                              cTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgacgcacgaagagcgcaatacagtccattgctggcgg                       <  2:497147‑M2/100‑79 (MQ=255)
                                                                              cTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgacgcacgaagagcgcaatacagtccattgctggcgg                       <  2:269416‑M2/100‑79 (MQ=255)
                                                                              cTAAAGTCGAACCGCCAGGCTAgactttagcctgtattgttagcgccagtttttaacagacgcgacgcacgaagagcgcaatacagtccattgctggcgg                       <  1:668873‑M2/100‑79 (MQ=255)
                                                                              cTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGa                       <  2:2317064/100‑1 (MQ=255)
                                                                               tAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGaa                      >  2:74966/1‑100 (MQ=255)
                                                                               tAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGaa                      >  2:1249608/1‑100 (MQ=255)
                                                                                aaaGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAAc                     <  2:1688038/100‑1 (MQ=255)
                                                                                 aaGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACg                    >  1:20100/1‑100 (MQ=255)
                                                                                  aGTCGAACCGCCAGGCTAGACTGTAGTTCCAAAACACTAAACCTAAAAGCTGGGGCAATACAAGGTTCACGCAAACAGTGACCATTCCCGCTccagaa                     >  1:1869473/1‑94 (MQ=255)
                                                                                   gTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGt                  >  2:1472445/1‑100 (MQ=255)
                                                                                    tCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTc                 <  1:2574674/100‑1 (MQ=255)
                                                                                     cGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCt                >  2:1386623/1‑100 (MQ=255)
                                                                                     cGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCt                <  1:1416137/100‑1 (MQ=255)
                                                                                     cGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAAACTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCt                <  1:1121620/100‑1 (MQ=255)
                                                                                      gAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCTg               >  1:2139772/1‑100 (MQ=255)
                                                                                      gAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACAGTCTg               >  1:1167773/1‑100 (MQ=255)
                                                                                         ccGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTc                 <  1:787555/95‑1 (MQ=255)
                                                                                          cGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCTGcaca           >  1:105813/1‑100 (MQ=255)
                                                                                          cGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCTGcaca           >  1:2339237/1‑100 (MQ=255)
                                                                                          cGCCAGGCTAGACTTTAGTTACCCAACACTAACCATATGAGTTGGGGAACTAAGATGTTCAAGCATGTAGTTACCATTCGCGCTTCGagag                    >  1:2284174/1‑88 (MQ=255)
                                                                                           gCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCTGCacac          >  2:1279629/1‑100 (MQ=255)
                                                                                           accAGGCTAGACTTTAGTTCCACAACCCTAAACCTATAAGATGGGGAAATACAATGTTCCACCAAACAGTTCCCATTACCGCTCCGAACGGTCTGca             >  1:2138421/2‑97 (MQ=255)
                                                                                              aGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCTGCACACCCg       >  1:508113/1‑100 (MQ=255)
                                                                                               ggCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCTGCACACCCGc      <  2:225799/100‑1 (MQ=255)
                                                                                               ggCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCTGCACACCCGc      >  1:258082/1‑100 (MQ=255)
                                                                                                gCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCTGCACACCCg       >  1:1787671/1‑98 (MQ=255)
                                                                                                 cTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCTGCACACCCGccc    >  1:2120676/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GTCAACACCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCTGCACACCCGCCCTG  >  NC_000913/2533620‑2533818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.