| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3977430 | 80 (0.870) | 15 (0.180) | 8/164 | NT | 15.3% | coding (1153/1251 nt) | wzxE | O‑antigen translocase |
| ? | NC_000913 | = 3977447 | 92 (1.090) | coding (1170/1251 nt) | wzxE | O‑antigen translocase | |||||
Only 100 of 130 total aligned reads displayed.
GCGTCACTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTACTGATTCACGTAC > NC_000913/3977349‑3977546 | gCGTCACTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGg > 2:771026‑M2/1‑99 (MQ=255)gCGTCACTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGg > 1:744530‑M2/1‑99 (MQ=255) cGTCACTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGgc > 2:2300069‑M2/1‑98 (MQ=255) gTCACTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGACGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGggcgcg < 1:1432290/97‑1 (MQ=255) tcgcTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGggcgcggcgc < 1:2064382/97‑1 (MQ=255) tCACTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGgcgc > 1:1225227‑M2/1‑96 (MQ=255) cACTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGgcgca < 1:200071‑M2/100‑6 (MQ=255) aCTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGgcgcag > 2:468937‑M2/1‑94 (MQ=255) aCTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGgcgcag > 2:808218‑M2/1‑94 (MQ=255) cTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGgcgcagg < 1:649712‑M2/100‑8 (MQ=255) cTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGgcgcagg < 1:1729528‑M2/100‑8 (MQ=255) tGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGc > 2:622650/1‑100 (MQ=255) cGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCat > 2:1381157/1‑100 (MQ=255) tttATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCatatat < 1:1175533/100‑1 (MQ=255) atatTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGTTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGc < 2:1442089/100‑1 (MQ=255) atatTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGc < 2:2093832/100‑1 (MQ=255) ttCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAAc > 2:1126284/1‑100 (MQ=255) cTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACtt < 2:2085217/100‑1 (MQ=255) cGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTatat < 1:517372/100‑1 (MQ=255) aGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGTCTAATACCTGCGCATGGTGCACTGGGCGCGgcgcaaggattagccagtgggcaaat < 1:1304512‑M2/96‑27 (MQ=255) ntCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCt > 1:1095566/2‑100 (MQ=255) cagccagcTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGTCGCGGCGCAGGCATATATGGCAACTTATATCGTCTAt < 1:1391149/100‑1 (MQ=255) aGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTAtt < 1:2222616/100‑1 (MQ=255) gCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTAttt > 1:909290/1‑100 (MQ=255) gCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTAttt < 2:2368256/100‑1 (MQ=255) gCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTAttt < 2:2431361/100‑1 (MQ=255) gCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTAttt > 1:1088319/1‑100 (MQ=255) gCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTAttt < 1:535347/100‑1 (MQ=255) ccAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTAtttt < 2:435518/100‑1 (MQ=255) gTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCGCTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTtct < 2:1737407/100‑1 (MQ=255) tCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTctct > 1:1339057/1‑100 (MQ=255) tCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTctct < 2:2223331/100‑1 (MQ=255) aCTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCttt > 2:943162/1‑100 (MQ=255) aCTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCtt > 2:2516125/1‑99 (MQ=255) cTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTttg < 2:483838/100‑1 (MQ=255) cTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTttg > 2:1876372/1‑100 (MQ=255) tttATTGATGCTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCCTATATGGCAACTTATATCGTCTCTTTTTCTCTgtgt > 1:820274/1‑100 (MQ=255) aTTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTtgttgt < 2:912363/100‑1 (MQ=255) ttGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTtgtg < 2:2238208/100‑1 (MQ=255) tGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTgg < 1:618846/100‑1 (MQ=255) tGATGGTATTTGCCCACTGGCTAATCCAGGCGCATAGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATAGCGTCTATTTTTCTCTTTGTTGTgg < 2:1197840/100‑1 (MQ=255) gATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGc < 2:2333223/100‑1 (MQ=255) gATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGc < 1:1580386/100‑1 (MQ=255) gATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGc > 1:1265433/1‑100 (MQ=255) aTGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCg > 2:515656/1‑100 (MQ=255) aTGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCg < 2:2426939/100‑1 (MQ=255) aTGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCg < 2:2571261/100‑1 (MQ=255) tGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCgt > 1:396077/1‑100 (MQ=255) ggTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCgtg > 1:1016875/1‑100 (MQ=255) ggTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCgtg > 1:443003/1‑100 (MQ=255) aTTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGttt < 1:278/100‑1 (MQ=255) aTTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATAGATGGCGACTTAGCTTGTCTAGTTTTCTCTCTGTTGTGGCGTGttt > 1:429902/1‑100 (MQ=255) tttGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTATGGCGTGtttt > 1:85783/1‑100 (MQ=255) tGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTa > 2:277796/1‑100 (MQ=255) tGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTa < 2:1336499/100‑1 (MQ=255) tGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTa > 2:2531463/1‑100 (MQ=255) gCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTAc > 2:1926008/1‑100 (MQ=255) tGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGc < 1:549651/100‑1 (MQ=255) cTAATCCCTGCGCATGGTGCACTGGGCGCGgcgcagggattagccagtgggcaaataccatcaataaagtgaactggctgacttccgccagaatataaaa < 1:2185260‑M2/100‑71 (MQ=255) tAATCCCTGCGCATGGTGCACTGGGCGCGgcgcagggattagccagtgggcaaataccatcaataaagtgaactggctgacttccgccagaatataaaac < 2:814733‑M2/100‑72 (MQ=255) aaTCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAgg < 2:1885127/100‑1 (MQ=255) aTCCCTGCGCATGGTGCACTGGGCGCGgcgcagggattagccagtgggcaaatacaatcaataaagtgaactggctgacttccgccagaatataaaacgg < 1:1003142‑M2/100‑74 (MQ=255) aTCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGAAACTTATATCGTCTATTTCTATATTTGTTATGGAAAGTTTTTACTCTGGCGTAGGc < 1:1387833/100‑1 (MQ=255) tCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCg > 2:400020/1‑100 (MQ=255) cccTGCGCATGGTGCACTGGGCGCGgcgcagggattagccagtgggcaaataccatcaataaagtgaactggctgacttccgccagaatataaaaccgca < 2:1218937‑M2/100‑76 (MQ=255) cccTGCGCATGGTGCACTGGGCGCGgcgcagggattagccagtgggcaaataccatcaataaagtgaactggctgacttccgccagaatataaaaccgca < 1:2179537‑M2/100‑76 (MQ=255) cccTGCGCATGGTGCACTGGGCGCGgcgcagggattagccagtgggcaaataccatcaataaagtgaactggctgacttccgccagaatataaaaccgca < 2:567753‑M2/100‑76 (MQ=255) cccTGCGCATGGTGCACTGGGCGCGgcgcagggattagccagtgggcaaataccatcaataaagtgaactggctgacttccgccagaatataaaaccgc < 2:977752‑M2/99‑75 (MQ=255) cccTGCGCATGGTGCACTGGGCGCGgcgcagggattagccagtgggcaaataccatcaataaagtgaactggctgacttccgccagaatataaaaccg < 1:2185946‑M2/98‑74 (MQ=255) cccTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCgg > 1:1348898/1‑100 (MQ=255) cccTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCgg < 2:398360/100‑1 (MQ=255) ccTGCGCATGGTGCACTGGGCGCGgcgcagggattagccagtgggcaaataccatcaataaagtgaactggctgacttccgccagaatataaaaccgcag < 1:2253042‑M2/100‑77 (MQ=255) ccTGCGCATGGTGCACTGGGCGCGgcgcagggattagccagtgggcaaataccatcaataaagtgaactggctgacttccgccagaatataaaaccgcag < 2:2271331‑M2/100‑77 (MQ=255) ccTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCggg > 1:405828/1‑100 (MQ=255) ccTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTGATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCggg > 2:2279103/1‑100 (MQ=255) cTGCGCATGGTGCACTGGGCGCGgcgcagggattagccagtgggcaaataccatcaataaagtgaactggctgacttccgccagaatataaaaccgcagt < 1:2303958‑M2/100‑78 (MQ=255) tGCGCATGGTGCACTGGGCGCGGCGCAGGCCTATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCa < 1:1902798/100‑1 (MQ=255) gcgcATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTTTTTTTGTTTTTGCGTGTATTTACTCTGACGt > 1:755662/1‑90 (MQ=255) cgcATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATg < 2:336053/100‑1 (MQ=255) cgcATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATg < 2:1495948/100‑1 (MQ=255) gcATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGa > 1:1705547/1‑100 (MQ=255) gcATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACGTATATCGTCTATTTTTCTCTTTGTTGTGGGGTGTTTTTGCTCTGGCGTAGGCGGGCATGa > 1:1736299/1‑100 (MQ=255) ggTGCACTGGGCGCGGCGCAGGCATATATGACAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGt > 2:1768312/1‑100 (MQ=255) gTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTTTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTa > 1:2071764/1‑100 (MQ=255) gTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTa < 1:1480030/100‑1 (MQ=255) gTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTa > 2:1328573/1‑100 (MQ=255) tgtgcTGGGCGAGGGTTAGGAATATATGGGGTCTTGTATTGTTTGTTTTTGTCGGTGTTGTGGCGTCTTTTTACTCTGGCGTAGGCGGGCATGACTGtgc < 1:1553977/96‑3 (MQ=255) tGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGtcc < 2:1740732/100‑3 (MQ=255) tGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTAc > 1:53017/1‑100 (MQ=255) gCACTGGGCGCGgcgcagggattagccagtgggcaaataccatcaataaagtgaactggctgacttccgccagaatataaaaccgcagtgacgctttggc > 2:2253057‑M2/1‑12 (MQ=255) gCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTACt > 2:1418657/1‑100 (MQ=255) aCTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTACTGa < 2:170449/100‑1 (MQ=255) cttggcgcggcgcAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTTTACTGAt < 2:1171106/97‑1 (MQ=255) cTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTACTGAt < 2:590930/100‑1 (MQ=255) tGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTACTGAtt < 2:1095570/100‑1 (MQ=255) ggcgcggcgcAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTACTGATTCa > 2:1054404/1‑100 (MQ=255) gcgcggcgcAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTACTGATTCAc < 1:277793/100‑1 (MQ=255) cgcggcgcAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTACTGCTTCACg > 2:2117604/1‑100 (MQ=255) cgcggcgcAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTACTGATTCACg > 2:1171774/1‑100 (MQ=255) ggcgcAGGCATATATGGCAACTTATATCGTCTATTTTTCTCATTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTACTGATTCACGTAc > 1:1413829/1‑100 (MQ=255) | GCGTCACTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGACTGTACTGATTCACGTAC > NC_000913/3977349‑3977546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |