| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,370,026 | T→A | 15.5% | intergenic (+23/‑190) | pspE → / → ycjM | thiosulfate:cyanide sulfurtransferase (rhodanese)/alpha amylase catalytic domain family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,370,026 | 0 | T | A | 15.5% | 287.0 / 35.1 | 115 | intergenic (+23/‑190) | pspE/ycjM | thiosulfate:cyanide sulfurtransferase (rhodanese)/alpha amylase catalytic domain family protein |
| Reads supporting (aligned to +/- strand): ref base T (44/53); new base A (5/13); total (49/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 117 total aligned reads displayed.
TAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTT > NC_000913/1369928‑1370123 | tAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCtt > 2:2475821/1‑100 (MQ=255)tAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATCCACCATGAGCGGCGCtt > 2:1120877/1‑100 (MQ=255) aGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTa < 2:1878262/100‑1 (MQ=255) gCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTa > 2:2320103/1‑99 (MQ=255) gCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTAt < 1:1774199/100‑1 (MQ=255) cGAGATGGGATATACCCACGTTGAGAACGCCGGTTGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTa < 2:1814831/98‑1 (MQ=255) agaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATgcg > 1:386747/1‑100 (MQ=255) gaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATgcgc < 2:46538/100‑1 (MQ=255) gaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAgcgc < 2:1265069/100‑1 (MQ=255) aTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGcc < 2:604172/100‑1 (MQ=255) ggATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgct < 2:1532570/100‑3 (MQ=255) tataCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcat < 1:339785/100‑6 (MQ=255) ataCCCACGTTGAGACCGCCGGTGGCTTAAAAGACATCGCAATGCCGAACGTTAAAGGTTATAAGAATTCACCATGATCGGCGCATAAGCGCCgctcatg < 1:432116/100‑7 (MQ=255) taCCCACGTTGAGAACGCCGGTGGCTTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcatgg < 1:611477/100‑8 (MQ=255) taCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑ttttttt < 1:1640787/100‑1 (MQ=255) taCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑ttttttt > 1:362853/1‑100 (MQ=255) taCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑ttttttt < 1:2398169/100‑1 (MQ=255) taCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcatgg < 1:873061/100‑8 (MQ=255) taCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcatgg < 1:128414/100‑8 (MQ=255) gaCCCACGTTGAGAACGCCAGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcatgg < 1:1221330/99‑8 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGGCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcatg < 1:906252/98‑7 (MQ=255) ccccCGTTGCGCACGCCCGTGGCCTGAAAGAGATCGCACTGCCGAAGGTCAAAGGTTACAAGTATTCTCCATGAGCGGCGCTTATGCGCCG‑‑ttttttt < 1:1543169/98‑1 (MQ=255) cccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑ttttttttt > 2:2268797/1‑100 (MQ=255) cccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑ttttttttt > 2:1987933/1‑100 (MQ=255) ccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTc < 1:921100/100‑1 (MQ=255) ccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTc < 1:1873840/100‑1 (MQ=255) ccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTc < 2:1655176/100‑1 (MQ=255) cACGTTGAGAACGCCGGTGGCCTGAAAGACAGCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCATAAGCGCCgctcatg < 1:959519/95‑7 (MQ=255) aCGTTGAGAACGGCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑g < 2:1517198/100‑1 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑Gt > 2:2195859/1‑100 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑Gt > 1:338984/1‑100 (MQ=255) tGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTAGGCGCCG‑‑TTTTGTTTTCT‑GTcac < 1:1078494/100‑1 (MQ=255) tGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTACGCGCCG‑‑TTTTTTTTTCT‑GTcac < 1:1500457/100‑1 (MQ=255) agaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCacac < 2:1812181/100‑1 (MQ=255) agaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCacac < 2:2238525/100‑1 (MQ=255) gaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACAcc > 2:381406/1‑100 (MQ=255) gaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACAcc > 2:1881509/1‑100 (MQ=255) cGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTTTCT‑GTCACACCt > 2:2278535/1‑100 (MQ=255) ccGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTAtt > 1:421858/1‑100 (MQ=255) ggTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTa < 2:2502267/100‑1 (MQ=255) gTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTAc < 1:1082615/100‑1 (MQ=255) gTGGCCTAAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTAttt < 1:245147/98‑1 (MQ=255) tGGCCTGAAAGACATCGCAATGCGGAAGGTCAAAGGTTAAAAGTATTCACCATGAGCGGTGCTTATGCGCCT‑‑TTTTTTTTTCT‑GTCACACCTTATTTACa < 1:870693/100‑1 (MQ=255) tGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACa < 2:1936747/100‑1 (MQ=255) gCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑TTTTTTTTTCT‑GTCACCCTTTATTTAc > 2:23782/1‑98 (MQ=255) gCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATc < 2:1301856/100‑1 (MQ=255) ccTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTTTTTTTTCT‑GTCACCCCtattttccc > 1:1084573/1‑91 (MQ=255) ccTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATcc > 2:1375533/1‑100 (MQ=255) ccTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATcc > 2:804655/1‑100 (MQ=255) ccTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATcc > 2:1247339/1‑100 (MQ=255) cTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATccc > 2:1843445/1‑100 (MQ=255) gAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑TTTTCATTTTATTTACATc > 1:2392254/1‑96 (MQ=255) aGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑‑TTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGa < 2:1635251/100‑1 (MQ=255) cATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGatt > 2:589435/1‑100 (MQ=255) cATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGatt > 2:589515/1‑100 (MQ=255) aTCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGatt > 1:2163423/1‑100 (MQ=255) aTCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGatta < 1:1417129/100‑1 (MQ=255) gCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTAttt < 2:711365/100‑1 (MQ=255) aaTGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCCTAGATTATTTGc > 1:2138829/1‑100 (MQ=255) ccGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTTT‑TTTTTCCAGTATTTACATCCCCATAAATTTTTTTCGtta > 1:1184393/1‑98 (MQ=255) ccGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCa < 2:1962877/100‑1 (MQ=255) ggTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTca < 2:570153/100‑1 (MQ=255) cAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCCTAGATTATTTGCGTCAGCTcaca > 1:1956800/1‑99 (MQ=255) cAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACaa > 2:164169/1‑100 (MQ=255) aaaGGTTAAAAGAATTCACCATGAGCTGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACaaa < 2:1261556/100‑1 (MQ=255) aGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATa < 1:311311/100‑1 (MQ=255) gTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACg < 1:95249/100‑1 (MQ=255) ttAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGc > 2:778303/1‑100 (MQ=255) tAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTTT‑TTTTTTCCTTATTAACATCCCCATAGATTATTTGCGTTACCTTACAAATACGCt > 1:2227880/1‑100 (MQ=255) tAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCt < 2:1490302/100‑1 (MQ=255) aaaaaaATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCtt < 2:125727/100‑1 (MQ=255) aaaGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTTTGGTCCCACCTTATTTAAATCCCCAAAGATTATTTCCTCAAGCTCACAAATACGCtt > 2:417618/1‑100 (MQ=255) aaaGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTTT‑TTTTTTTTTTATTTACATCCCCATAGATTATTTTCGTCACCTCACAAATACGCttt > 1:1054163/1‑100 (MQ=255) aaaGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTTACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCttt > 2:2216819/1‑100 (MQ=255) aaaGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCttt > 1:1475792/1‑100 (MQ=255) aaaGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCttt > 2:360516/1‑100 (MQ=255) aTTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTTT‑TTTTCCCCTTATTTACATCCCCATAGATTTTTTACGTTACCTCCGAAATACGCTTTTccc > 1:195845/1‑99 (MQ=255) aTTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑CTCACACCTTATTTACATCCCCATACATCATTTGCGTCACACCACCAATACGCgtttttac > 1:1931270/1‑97 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCt < 1:2515662/100‑1 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCACt > 1:1788359/1‑100 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCCG‑‑‑TTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTg < 2:265728/100‑1 (MQ=255) tCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCt < 2:386749/99‑1 (MQ=255) tCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTg < 2:2564878/100‑1 (MQ=255) gaaaaaaaaacggcgCATAAGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACCAATACGCTTTTTCCCTg > 2:1639324/11‑100 (MQ=38) gaaaaaaaaacggcgCATAAGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTg > 2:1652553/11‑100 (MQ=38) aaaaaaaacggcgCATAAGCGCCGC‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTg > 1:659361/9‑99 (MQ=37) aCCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGt < 1:2319206/100‑1 (MQ=255) aCCATGAGCGGCCCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTgg < 1:846700/99‑1 (MQ=255) ccATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTa > 2:709337/1‑100 (MQ=255) cATGAGCGGCGCTTATGTGCCG‑‑TTTTTATTTAT‑GTCATGCCTTGCTTACATGACGATAGATTATTTGCCTCAGTCCACAAAAACGCTTTTTCCCTGCTa > 1:1335121/1‑99 (MQ=255) aaaaacggcgCATAAGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaa > 2:580632/6‑100 (MQ=255) aGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaaaaa > 2:1599547/1‑100 (MQ=255) gcggcgCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGAGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAAt < 1:773571/100‑1 (MQ=255) cggcgCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATg < 2:1362817/100‑1 (MQ=255) cggcgCTTATGCGCCG‑‑GTTTTTTTTCG‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATg < 2:815881/100‑1 (MQ=255) ggcgCTTATGCGCCG‑‑‑TTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGAt < 2:606662/100‑1 (MQ=255) gtgcTTATGCGCCG‑‑TGTTTTTTACT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCATCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAAt < 1:720032/95‑1 (MQ=255) gcgcTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGa < 1:1754329/99‑1 (MQ=255) gcTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGAttt < 1:1892576/100‑1 (MQ=255) cTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCAAAAATACGCTTTTTCCCTGGTAAAAAATGAttt > 1:515512/1‑99 (MQ=255) | TAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TTTTTTTTTCT‑GTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTT > NC_000913/1369928‑1370123 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |