| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,757,688 | T→A | 15.2% | intergenic (+31/+33) | lpp → / ← ldtE | murein lipoprotein/murein L,D‑transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,757,688 | 0 | T | A | 15.2% | 256.9 / 29.9 | 99 | intergenic (+31/+33) | lpp/ldtE | murein lipoprotein/murein L,D‑transpeptidase |
| Reads supporting (aligned to +/- strand): ref base T (38/45); new base A (5/10); total (43/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
GCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGAAGGC > NC_000913/1757589‑1757787 | gctgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAt < 2:1781654/100‑1 (MQ=255) ctgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAtt > 1:61374/1‑100 (MQ=255) ctgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAAAACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAtt > 1:1659888/1‑100 (MQ=255) tgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATtg < 1:603980/100‑1 (MQ=255) tgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACAAAAAAAAAAAAAAATGGCGCACAAtg < 1:1088166/100‑1 (MQ=255) ctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATtgtg > 2:666606/1‑100 (MQ=255) tAAAGATGACGCAGCTCGTGCTAACCAGCGTCTAGACAACATGGCTACTAAATACTGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATcgtg > 1:294939/1‑99 (MQ=255) aaaGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTgcg > 2:1319131/1‑100 (MQ=255) aaaGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTgcg < 2:1007920/100‑1 (MQ=255) aaaGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTgcg < 2:2288131/100‑1 (MQ=255) aaaGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTgcg > 1:464458/1‑100 (MQ=255) aaaGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTgcg < 2:2312382/100‑1 (MQ=255) tGACGCAGTGCGTGCTAACCAGAGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAATGTGCGCCAtt < 1:2253151/100‑1 (MQ=39) gACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTAGTAAATACCGCAACTACTAGTACCTGTGAAGCGAAAAATTGCGCACAATGTgcgc > 1:759548/1‑95 (MQ=255) gACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAttt < 1:171696/100‑1 (MQ=255) gACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAttt < 1:2401888/100‑1 (MQ=255) gACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAATGTGCGCCAttt < 2:1487988/100‑1 (MQ=255) gACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAATGTGCGCCAttt < 2:839753/100‑1 (MQ=255) tcGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAATGTGCGCCAttt < 1:1570619/98‑1 (MQ=255) cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAttttt < 1:82551/100‑1 (MQ=255) gCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAATGTGCGCCAtttttc < 2:335976/100‑2 (MQ=255) cAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAATGTGCGCCAtttttca < 1:2277926/100‑3 (MQ=255) cAGCTCGTGCTAACCAGCGGCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAtttttt‑t < 1:131493/100‑1 (MQ=255) aGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAATGTGCGCCAtttttcac < 2:2436662/100‑4 (MQ=255) ggtCGTGCTAACCAGCGTCTGGACAACATGGATACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTg > 2:1743714/3‑100 (MQ=255) gCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTg < 2:786840/100‑1 (MQ=255) gCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTg < 1:1674435/100‑1 (MQ=255) gCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTg < 1:372449/100‑1 (MQ=255) gCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAATGTGCGCCAtttttcac < 1:2372566/99‑4 (MQ=255) cTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGt > 2:1411877/1‑100 (MQ=255) tCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAtttttcact < 1:217243/98‑5 (MQ=255) tCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTc < 2:1345926/100‑1 (MQ=255) cGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCt < 2:2476104/100‑1 (MQ=255) cGTGCTAACCAGCGTCTGGACAACATGACTAATAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTATGCGCCATTTTTT‑TTGTcc > 1:472789/1‑99 (MQ=255) gTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTg > 1:23558/1‑100 (MQ=255) gCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGcc < 2:454985/100‑1 (MQ=255) cTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCg < 1:330793/100‑1 (MQ=255) aaCCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGtt > 2:1047115/1‑100 (MQ=255) aaCCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGtt > 1:1063726/1‑100 (MQ=255) aCCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGttt < 1:1023536/100‑1 (MQ=255) ccAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTa > 2:1416652/1‑100 (MQ=255) cAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTAc < 2:945938/100‑1 (MQ=255) cAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTAc < 1:352586/100‑1 (MQ=255) cAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCAGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTAc > 1:578043/1‑100 (MQ=255) ccgatCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTAcc < 2:592769/96‑1 (MQ=255) atcGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTAcc < 2:1772907/98‑1 (MQ=255) gCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCg < 2:248003/100‑1 (MQ=255) gTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGc < 1:946290/99‑1 (MQ=255) ggACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTAccagatcgg > 1:592766/1‑93 (MQ=255) ggACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTg > 2:918168/1‑100 (MQ=255) ggACAACATGGCTACTAAATACCGCAAGTAATAGTACCCGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACt < 1:549746/99‑1 (MQ=255) acaacaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCg < 1:201032/100‑1 (MQ=255) caacaTGGCTACTAAAACCCACAAGTAATAATACATATTGAGTTACAAATGGCGCATATTGTGCGCCTTTATTT‑TCGTCTATCGTTTAccatta > 1:791439/1‑90 (MQ=255) acaTGGCTACTAAATACCGCAAGTACTAGTACCTGTGAAGTGAAAAATCGCGCACATTGTGCGCCATTTTTT‑TCGTCTGCCGTTTACCGCTACTGCGTCa > 1:932595/1‑100 (MQ=255) caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCAc < 2:21874/100‑1 (MQ=255) caTGGCTACTAAATACCGCAAGTAATAGTACCAGTGAAGTGAAAAATGACGCAAATTGTGCGCCATTTTTT‑TTGTCTGACGTTTACCGCTACTGCGTc > 1:412652/1‑98 (MQ=255) aTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCAcg < 1:1083675/100‑1 (MQ=255) tactaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTaa < 1:1873685/100‑1 (MQ=255) ctaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACa < 2:474919/100‑1 (MQ=255) aaaTACCGCACGTCATAGTACCTGTGAAGTGAAAAATGGCGCAGATTGTGCGCCATTTTTT‑TTGTCCGACGATTACCGCTACTGCGTCAcg > 1:1450767/1‑91 (MQ=255) aaTACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACatat < 1:1047112/100‑1 (MQ=255) aaTACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACatat > 2:1876397/1‑100 (MQ=255) aCCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTcc > 2:2568765/1‑100 (MQ=255) cGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTccc > 1:233709/1‑99 (MQ=255) gCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTccc < 1:2467071/98‑1 (MQ=255) gCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCtt > 2:1603182/1‑100 (MQ=255) gCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCtt > 2:2113370/1‑100 (MQ=255) cgatcttAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGc < 1:94710/94‑1 (MQ=255) aaGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGc > 2:463038/1‑100 (MQ=255) tccgatctACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGctc < 1:552138/93‑1 (MQ=255) tAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGctct > 2:2070637/1‑100 (MQ=255) aTAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTgg < 2:1565250/100‑1 (MQ=255) tAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGt < 2:1449127/100‑1 (MQ=255) aGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGtt < 2:1784441/100‑1 (MQ=255) tACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCa < 2:1158887/100‑1 (MQ=255) tACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCa < 2:2017356/100‑1 (MQ=255) aCCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGctcagatcgga > 2:552140/1‑92 (MQ=255) aCCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTc > 1:1717117/1‑98 (MQ=255) gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCAtt > 2:1896335/1‑100 (MQ=255) tgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTc < 2:2321325/100‑1 (MQ=255) caaaaaaaaTGGCGCACAATGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTgc > 1:2022426/5‑100 (MQ=255) agtgaaAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATAGTCCCTTGCTCTGGTTCACCATTCTgc < 2:1133932/100‑1 (MQ=255) ntgaaAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATCTTCCCTTGCTCTGGTTCACCATTCTgcg > 1:952613/2‑100 (MQ=255) aaaaaaaaTGGCGCACAATGTCCGCCATTTTTTATTATCTAAAGACAACCGCTACTGCATCACTCGTTCTCTATTTTCCAGCTCTGATTCACCa > 1:2090014/4‑94 (MQ=2) gaaAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCt > 1:594105/1‑100 (MQ=255) gaaAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCt > 1:2086619/1‑100 (MQ=255) gaaAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCt < 2:296645/100‑1 (MQ=255) gaaAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCt > 2:383307/1‑100 (MQ=255) gaaAAATGGCGCACACTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCt < 2:2556291/100‑1 (MQ=255) aTGGCGCACAATGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGActc > 2:2172452/1‑100 (MQ=255) ggCGCACATTGTGCGCCATTTTTT‑TTTTTTTTTTTTTACCGCTACTGCGTCACGCGTAACATATTCCTTTTCTCTGTTTCACCTTTCTTCGCtctct > 1:2025304/1‑93 (MQ=255) ggCGCACATTGTGCGCCATTTTTT‑TTGTCTTCCGTTTACCGCTACTGCGTCACGCGTAACATCTTCCCTTGCTCTGGTTCACCATTCTGCCCTGACTCTa > 1:2519442/1‑100 (MQ=255) cgcACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACt < 1:2346226/100‑1 (MQ=255) cgcACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGCAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACt > 2:1216186/1‑100 (MQ=255) cgcACATTGGGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACt < 2:1063730/100‑1 (MQ=255) gcACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCAGCGCTGACTCTACTg > 2:2551538/1‑100 (MQ=255) aTTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGaa > 2:2514095/1‑98 (MQ=255) aTTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGAAg < 1:999860/99‑1 (MQ=255) aTTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACGGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGAAgg < 1:33543/100‑1 (MQ=255) ttGTGCGCCATTTTTT‑TTGTCTGCCCTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGAAGgc < 1:522421/100‑1 (MQ=255) | GCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTT‑TTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGAAGGC > NC_000913/1757589‑1757787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |