Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,079,004 G→C 18.1% intergenic (+73/+28) yoeF → / ← yeeX pseudogene, CP4‑44 putative prophage remnant;Phage or Prophage Related/UPF0265 family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,079,0040GC18.1% 247.6 / 46.7 99intergenic (+73/+28)yoeF/yeeXpseudogene, CP4‑44 putative prophage remnant;Phage or Prophage Related/UPF0265 family protein
Reads supporting (aligned to +/- strand):  ref base G (48/33);  new base C (11/7);  total (59/40)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.73e-01

Only 100 of 101 total aligned reads displayed.

TGCATACAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCTTTGG  >  NC_000913/2078906‑2079102
                                                                                                  |                                                                                                  
tgcATACAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCgg                                                                                                   >  2:1670185/1‑100 (MQ=255)
tgcATACAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCg                                                                                                    >  1:36057/1‑99 (MQ=255)
  cATACAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGc                                                                                                 >  1:231574/1‑100 (MQ=255)
   aTACAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCa                                                                                                >  2:541351/1‑100 (MQ=255)
     aCAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAAc                                                                                              >  1:572087/1‑100 (MQ=255)
      cAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAAcc                                                                                             >  2:2435699/1‑100 (MQ=255)
      cAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAAcc                                                                                             >  2:1517564/1‑100 (MQ=255)
      cAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAAc                                                                                              >  2:2150378/1‑99 (MQ=255)
       agaagaAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAAccc                                                                                            >  2:576587/1‑100 (MQ=255)
        gaagaaGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCt                                                                                           >  1:1212683/1‑100 (MQ=255)
        gaagaaGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCt                                                                                           >  2:1973691/1‑100 (MQ=255)
           gaagGCTGTTGTTAATTTCGATTGTTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCAt                                                                                        <  1:644256/100‑1 (MQ=255)
           gaagGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATGAATGAGCAATGAGGGTTGCCCGGCAACCCTCAt                                                                                        <  1:1551275/100‑1 (MQ=255)
           gaagGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCAt                                                                                        >  1:953484/1‑100 (MQ=255)
           gaagGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCAt                                                                                        >  1:843630/1‑100 (MQ=255)
           gaagGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCCGGCAACCCTCAt                                                                                        <  2:2272240/100‑1 (MQ=255)
           gaagGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCCGGCAACCCTCAt                                                                                        <  1:292284/100‑1 (MQ=255)
           gaagGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCCGGCAACCCTCAt                                                                                        <  1:2022766/100‑1 (MQ=255)
           gaagGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACCGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCCGGCAACCCTCAt                                                                                        <  2:20742/100‑1 (MQ=255)
             agGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACGCAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCAttn                                                                                      <  2:308099/100‑2 (MQ=255)
             agGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCCGGCAACCCTCATTg                                                                                      <  1:1397196/100‑1 (MQ=255)
              ggCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTgn                                                                                     <  1:2305313/100‑2 (MQ=255)
               gCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTg                                                                                      >  2:2279844/1‑98 (MQ=255)
                  gttgttAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATaa                                                                                 >  2:1592755/1‑100 (MQ=255)
                  gttgttAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATaa                                                                                 >  2:1433873/1‑100 (MQ=255)
                  gttgttAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATaa                                                                                 >  1:972260/1‑100 (MQ=255)
                   ttgttAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATaaa                                                                                >  2:2493891/1‑100 (MQ=255)
                    tgttAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATaaaa                                                                               >  1:1917098/1‑100 (MQ=255)
                    tgttAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATaaaa                                                                               >  2:1968778/1‑100 (MQ=255)
                     gttAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAAc                                                                              >  2:1274755/1‑100 (MQ=255)
                        aaTTACGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCCATGAGGGTTGCCCGGCAACCCTCATTGCATAAAACggg                                                                           <  1:381619/100‑1 (MQ=39)
                         aTTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGa                                                                          <  1:1769866/100‑1 (MQ=255)
                          tttCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGaa                                                                         >  2:368358/1‑100 (MQ=255)
                            tCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAAtt                                                                       <  2:1527307/100‑1 (MQ=255)
                            tCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAAtt                                                                       >  2:1874744/1‑100 (MQ=255)
                                 tGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTActtc                                                                  <  2:1103861/100‑1 (MQ=255)
                                 tGGTTATCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTActtc                                                                  <  1:2473046/100‑1 (MQ=255)
                                  ggTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTActtcg                                                                 <  1:2265480/100‑1 (MQ=255)
                                    ttCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTActtcgct                                                               >  2:2048651/1‑100 (MQ=255)
                                    ttCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTActtcgct                                                               >  1:2275092/1‑100 (MQ=255)
                                       tcGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTActtcgcttcg                                                            >  2:1894113/1‑100 (MQ=255)
                                        cGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTGCttcgcttcgc                                                           >  1:1364340/1‑100 (MQ=255)
                                        cGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTGCttcgcttcgc                                                           <  2:1364348/100‑1 (MQ=255)
                                        cGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTActtcgcttcgn                                                           <  2:2113849/100‑2 (MQ=255)
                                        cGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACttcgcttcgc                                                           >  2:2137136/1‑100 (MQ=255)
                                            tGAGAATGATGACGGTGATACACAGATACGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGtt                                                       >  1:879915/1‑100 (MQ=255)
                                              agaATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGtttt                                                     >  2:1154617/1‑100 (MQ=255)
                                              agaATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGtttt                                                     <  1:1592746/100‑1 (MQ=255)
                                              agaATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGtttt                                                     >  1:2115603/1‑100 (MQ=255)
                                                aaTGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTc                                                   <  2:1448861/100‑1 (MQ=255)
                                                    atgaCGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATAGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCAttt                                               >  2:635175/1‑100 (MQ=255)
                                                        cGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCg                                             >  1:2068394/1‑98 (MQ=255)
                                                        cGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGcc                                           >  2:2009362/1‑100 (MQ=255)
                                                        cGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGcc                                           <  1:2048639/100‑1 (MQ=255)
                                                           tGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCAt                                        >  1:1554307/1‑100 (MQ=255)
                                                           tGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCAt                                        >  2:2212711/1‑100 (MQ=255)
                                                             aTACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAg                                      <  2:876587/100‑1 (MQ=255)
                                                                  caGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCttt                                  >  1:2209152/1‑99 (MQ=255)
                                                                   aGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCa                                <  1:1262968/100‑1 (MQ=255)
                                                                   aGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCa                                <  1:1670176/100‑1 (MQ=255)
                                                                   aGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCa                                >  2:144375/1‑100 (MQ=255)
                                                                    gATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAg                               <  2:133422/100‑1 (MQ=255)
                                                                    gATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACACTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAg                               <  1:30695/100‑1 (MQ=255)
                                                                      tAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATCAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCt                             >  1:1437970/1‑100 (MQ=255)
                                                                      tAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCt                             <  2:1842435/100‑1 (MQ=255)
                                                                       aaGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCtt                            <  2:1082729/100‑1 (MQ=255)
                                                                        aGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCttt                           >  2:1327343/1‑100 (MQ=255)
                                                                            tCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTgg                       <  2:2199255/100‑1 (MQ=255)
                                                                             caatgagcaatgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACCTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGga                      <  1:1433865/100‑1 (MQ=255)
                                                                              aatgagcaatgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGgag                     >  2:173767/1‑100 (MQ=255)
                                                                              aatgagcaatgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGgag                     >  2:2501528/1‑100 (MQ=255)
                                                                              aatgagcaatgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGgag                     >  1:259011/1‑100 (MQ=255)
                                                                              aatgagcaatgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGgag                     <  1:1968768/100‑1 (MQ=255)
                                                                               atgagcaatgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGgaga                    <  1:2099064/100‑1 (MQ=255)
                                                                                tgagcaatgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGat                   <  2:1853953/100‑1 (MQ=255)
                                                                                tattcaatgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGat                   >  2:570817/5‑100 (MQ=255)
                                                                                 attcaatgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGata                  >  2:1444830/4‑100 (MQ=255)
                                                                                 attcaatgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGat                   >  1:810768/4‑99 (MQ=255)
                                                                                    caatgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATcg               >  2:485708/1‑100 (MQ=255)
                                                                                     aatgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATcgc              >  2:1687496/1‑100 (MQ=255)
                                                                                     aatgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATcgc              >  2:281823/1‑100 (MQ=255)
                                                                                      atgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATcgcg             >  2:920132/1‑100 (MQ=255)
                                                                                      atgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCGATAGCTTTCAGCTTTTTGGAGATATcgcg             >  1:2240635/1‑100 (MQ=255)
                                                                                      atgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATcgcg             >  1:1296780/1‑100 (MQ=255)
                                                                                      atgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATcgcg             >  1:1684536/1‑100 (MQ=255)
                                                                                       tgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCgcgg            >  1:78925/1‑100 (MQ=255)
                                                                                       tgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCgcgg            <  1:746180/100‑1 (MQ=255)
                                                                                        gagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCgcggc           <  2:2068407/100‑1 (MQ=255)
                                                                                        gagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAAATACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCgcggc           >  1:1601171/1‑100 (MQ=255)
                                                                                        gagGGTCGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTAATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCggggc           >  1:1533823/1‑100 (MQ=255)
                                                                                         agGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCgcggcg          <  2:972263/100‑1 (MQ=255)
                                                                                          gggTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGt         <  2:2046541/100‑1 (MQ=255)
                                                                                          gggTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGt         >  2:1614040/1‑100 (MQ=255)
                                                                                          gggTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGt         >  2:1277089/1‑100 (MQ=255)
                                                                                          gggTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGt         >  2:936776/1‑100 (MQ=255)
                                                                                          gggTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGt         >  1:1238778/1‑100 (MQ=255)
                                                                                            gTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTc       <  2:493394/100‑1 (MQ=255)
                                                                                                ccGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCTTTg   <  1:576585/100‑1 (MQ=255)
                                                                                                 cGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCTTTgg  <  1:1310466/100‑1 (MQ=255)
                                                                                                 cGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTGCGCCCATCGCTGTCAGCTTTTTGGAGATAGCGCTGCGTTCTTTg   <  1:1252118/99‑1 (MQ=255)
                                                                                                  |                                                                                                  
TGCATACAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCTTTGG  >  NC_000913/2078906‑2079102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: