Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,305,085 A→G 15.5% intergenic (+692/+23) eco → / ← mqo ecotin, a serine protease inhibitor/malate dehydrogenase, FAD/NAD(P)‑binding domain

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,305,0850AG15.5% 270.9 / 37.8 110intergenic (+692/+23)eco/mqoecotin, a serine protease inhibitor/malate dehydrogenase, FAD/NAD(P)‑binding domain
Reads supporting (aligned to +/- strand):  ref base A (43/50);  new base G (4/13);  total (47/63)
Fisher's exact test for biased strand distribution p-value = 1.11e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.25e-01

Only 100 of 111 total aligned reads displayed.

TTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCT  >  NC_000913/2304987‑2305184
                                                                                                  |                                                                                                   
ttGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATAc                                                                                                    <  1:1067914/100‑1 (MQ=255)
ttGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATAc                                                                                                    <  1:1068000/100‑1 (MQ=255)
ttGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATAc                                                                                                    <  1:2053236/100‑1 (MQ=255)
  ggATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCa                                                                                                  >  2:485660/1‑100 (MQ=255)
     tAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGc                                                                                               >  2:2001035/1‑100 (MQ=255)
       aGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCg                                                                                             >  2:1143051/1‑100 (MQ=255)
       aGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCg                                                                                             <  2:1018099/100‑1 (MQ=255)
        ggCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGCCTTATCAGCATACGCCACATCCGGCATACCATGCCgg                                                                                            >  1:2134739/1‑100 (MQ=255)
          cGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGAt                                                                                          <  2:2127540/100‑1 (MQ=18)
          cGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGAt                                                                                          <  2:2110637/100‑1 (MQ=18)
          cGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGAt                                                                                          <  2:886690/100‑1 (MQ=255)
          cGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGAt                                                                                          >  2:531059/1‑100 (MQ=255)
          cGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGCCTTATCAGCATACGCCACATCGGGCATACCATGCCAGa                                                                                           >  2:1860894/1‑99 (MQ=255)
           ggTTACGCCGCATCCGACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGAtg                                                                                         <  1:2527312/100‑1 (MQ=17)
           ggTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGAtn                                                                                         <  2:2201913/100‑2 (MQ=18)
           ggTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGAtg                                                                                         <  1:1194477/100‑1 (MQ=18)
           ggTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGAtg                                                                                         <  2:2136587/100‑1 (MQ=18)
           ggTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGAtg                                                                                         <  2:8480/100‑1 (MQ=18)
           ggTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGAtg                                                                                         <  1:1578759/100‑1 (MQ=18)
           ggTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGAtg                                                                                         <  1:466708/100‑1 (MQ=18)
           ggTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGAtg                                                                                         <  2:659188/100‑1 (MQ=255)
           ggTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGAtg                                                                                         <  1:1976187/100‑1 (MQ=255)
           gatctcgccgcATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGAtg                                                                                         <  2:2232540/95‑1 (MQ=14)
              tACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGATGTgg                                                                                      <  1:655443/100‑1 (MQ=21)
              tACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTgg                                                                                      <  2:1497804/100‑1 (MQ=255)
                cgccgcATCCGACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGATGTgg                                                                                      <  1:2227071/98‑1 (MQ=18)
                cgccgcATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGAtgagatc                                                                                    >  1:2232525/1‑95 (MQ=14)
                cgccgcATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCg                                                                                    >  1:119566/1‑100 (MQ=255)
                cgccgcATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCg                                                                                    <  1:881596/100‑1 (MQ=255)
                 gccgcATCCGACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGc                                                                                     <  1:1492161/98‑1 (MQ=255)
                  ccgcATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCCTGCCGGATGTGGCGTa                                                                                  >  1:1569173/1‑100 (MQ=255)
                  ccgcATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGc                                                                                     <  1:1995503/97‑1 (MQ=255)
                   cgcATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCgcct                                                                                 >  1:1570859/1‑97 (MQ=255)
                   cgcATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTAt                                                                                 <  1:1950174/100‑1 (MQ=255)
                       tCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCAtt                                                                             >  1:1990271/1‑100 (MQ=255)
                         cgaCATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTAc                                                                           >  2:1689828/3‑100 (MQ=255)
                         cAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTAc                                                                           <  1:142077/100‑1 (MQ=255)
                         cAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTAc                                                                           >  2:1872010/1‑100 (MQ=255)
                          aaCATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACa                                                                          <  1:2074666/100‑1 (MQ=255)
                          aaCATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACa                                                                          <  1:1721400/100‑1 (MQ=255)
                            cATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAAc                                                                        <  1:1779057/100‑1 (MQ=255)
                               cTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCa                                                                     >  1:1199686/1‑100 (MQ=255)
                               cTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCa                                                                     >  2:2582019/1‑100 (MQ=255)
                                tAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACg                                                                       <  1:761203/97‑1 (MQ=255)
                                caaCGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCaa                                                                    <  1:441373/99‑1 (MQ=255)
                                   cGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAatat                                                                 <  1:1537281/100‑1 (MQ=255)
                                         aGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGcc                                                            <  1:607578/99‑1 (MQ=255)
                                         aGCCGGTTGCCTGATGCGACGCGGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGcc                                                            <  1:2555192/99‑1 (MQ=255)
                                           ccGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCAct                                                         <  2:2179357/100‑1 (MQ=255)
                                            aggTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATACGCCAc                                                          >  1:1193130/2‑98 (MQ=255)
                                             ggTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCActtc                                                       <  2:1144908/100‑1 (MQ=255)
                                               ttGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCActtctt                                                     <  2:731996/100‑1 (MQ=255)
                                               ttGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCAACATCCGGAATACCATGCCGGATGTGGACTCTCATTCCAACGCAACATCCGCCaactct                                                      >  1:2383785/1‑94 (MQ=25)
                                                 gCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCtttt                                                   <  2:960896/100‑1 (MQ=255)
                                                  ccTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCttttt                                                  >  2:568296/1‑100 (MQ=255)
                                                  ccTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCttttt                                                  <  1:2109689/100‑1 (MQ=255)
                                                   cTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTg                                                 >  2:2315225/1‑100 (MQ=255)
                                                   cTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTg                                                 <  1:110054/100‑1 (MQ=255)
                                                    tGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGa                                                >  2:1057880/1‑100 (MQ=255)
                                                     gATGCGGCGCTGGCGCGTGTTATCTGTGTACGCAGCGTACGGCGTATCCTGCCGCATGGTCCGTAGCAGTACAGCGCAATATCCGCCACTGCTTGCTGaa                                               <  1:476725/100‑1 (MQ=255)
                                                      aTGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCCTTACAACGCAATATCCGCCACTTCTTTTTGAAc                                              <  1:1686302/100‑1 (MQ=255)
                                                         cGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACggg                                           >  1:1296246/1‑100 (MQ=255)
                                                         cGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACggg                                           >  2:648188/1‑100 (MQ=255)
                                                          gACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATTCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACggg                                           <  1:2373960/99‑1 (MQ=255)
                                                          gACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGt                                          <  1:1779512/100‑1 (MQ=255)
                                                          gACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGt                                          <  2:1704482/100‑1 (MQ=255)
                                                           aCGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGtt                                         >  1:1244478/1‑100 (MQ=255)
                                                           aCGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGtt                                         >  2:743465/1‑100 (MQ=255)
                                                              cTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCg                                      <  2:2180862/100‑1 (MQ=255)
                                                                ggCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGTATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGt                                    <  1:357130/100‑1 (MQ=255)
                                                                ggCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGt                                    >  1:2054498/1‑100 (MQ=255)
                                                                  cgcgTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGttt                                  <  2:2092926/100‑1 (MQ=255)
                                                                  cgcgTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGttt                                  <  1:2524391/100‑1 (MQ=255)
                                                                   gcgTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTc                                 >  2:1691185/1‑100 (MQ=255)
                                                                   gcgTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTc                                 <  2:909499/100‑1 (MQ=255)
                                                                    cgTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCa                                <  2:24881/100‑1 (MQ=255)
                                                                    cgTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCa                                >  2:1108994/1‑100 (MQ=255)
                                                                      tCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAAc                              <  2:1199690/100‑1 (MQ=255)
                                                                         tATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGc                           <  1:1843087/100‑1 (MQ=255)
                                                                           tCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTg                            >  1:2530738/1‑97 (MQ=255)
                                                                            cAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGt                        >  1:1065192/1‑100 (MQ=255)
                                                                             aGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGtt                       >  2:2221594/1‑100 (MQ=255)
                                                                                aTACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCAATACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCg                    >  1:1413546/1‑100 (MQ=255)
                                                                                  aCGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGc                  <  1:460606/100‑1 (MQ=255)
                                                                                   cGCCACATCCGGCATGGTATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCg                 >  2:161609/1‑100 (MQ=38)
                                                                                   cGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCg                 <  2:708819/100‑1 (MQ=255)
                                                                                    gCCACATCCGGCATGGTATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGAGGTTTCAACTGCGGTTTCGGCg                 >  1:1685532/1‑99 (MQ=37)
                                                                                    gCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGt                >  1:1777061/1‑100 (MQ=255)
                                                                                    gCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGt                >  2:2101290/1‑100 (MQ=255)
                                                                                     ccACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTa               <  2:1780253/100‑1 (MQ=255)
                                                                                      cacaTCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTAc              <  1:1689819/100‑1 (MQ=255)
                                                                                         aTCCGGCATGGTATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTAt           >  2:2539655/1‑100 (MQ=38)
                                                                                         aTCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAAGATCCGCCACTTCTTTTTGAACGGGTTGCGGTGTCAACTGCGGTTTCGGCGTCCt             >  1:236736/1‑98 (MQ=255)
                                                                                          tCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATc          >  2:2016587/1‑100 (MQ=255)
                                                                                            cGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATctg        >  2:2107900/1‑100 (MQ=255)
                                                                                                aTACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCtgctgc    <  1:527819/100‑1 (MQ=255)
                                                                                                 tACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGctgcc   >  1:16627/1‑100 (MQ=255)
                                                                                                 tACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGctgcc   >  2:2033342/1‑100 (MQ=255)
                                                                                                 tACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGctgcc   >  1:1062384/1‑100 (MQ=255)
                                                                                                  aCCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGTGGTTTCGGCGTACTATCTGctgcct  >  1:190199/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
TTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCT  >  NC_000913/2304987‑2305184

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: