Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,680,113 G→A 25.7% P878L (CCG→CTG)  yphG ← DUF4380 domain‑containing TPR repeat protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,680,1130GA25.7% 192.2 / 65.6 113P878L (CCG→CTG) yphGDUF4380 domain‑containing TPR repeat protein
Reads supporting (aligned to +/- strand):  ref base G (45/39);  new base A (18/11);  total (63/50)
Fisher's exact test for biased strand distribution p-value = 5.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01

Only 100 of 115 total aligned reads displayed.

CAGGCCTGCTGCGGCTGTCTGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCGGTCATGTCGTCGCGTTTC  >  NC_000913/2680014‑2680211
                                                                                                   |                                                                                                  
naGGCCTGCTGCGACTGTCTGGCATCAAGATGCTGGCAGGCGCGTAATAACTGGTTGAGGATAAGCTGACTGGTGACGTTCCCTTCCCCGCCTTCCCACg                                                                                                    >  1:1848198/2‑100 (MQ=255)
  ggCCTGCTGCGGCTGTCTGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACagg                                                                                                  >  2:1615365/1‑100 (MQ=255)
    ccTGCTGCGGCTGTCTGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTg                                                                                                <  2:1782070/100‑1 (MQ=255)
    ccTGCTGCGGCTGTCTGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTg                                                                                                >  1:421596/1‑100 (MQ=255)
         tgcGGCTGTCTGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAAtt                                                                                           <  1:1033966/100‑1 (MQ=255)
         tgcGGCTGTCTGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAAtt                                                                                           >  1:2360126/1‑100 (MQ=255)
           cGGCTGTCTGGCATCTAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTg                                                                                         <  2:2554033/100‑1 (MQ=255)
           cGGCTGTCTGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTg                                                                                         <  1:322670/100‑1 (MQ=255)
           cGGCTGTCTGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTg                                                                                         >  2:306228/1‑100 (MQ=255)
           cGGCTGTCTGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTg                                                                                         <  2:1246726/100‑1 (MQ=255)
            ggCTGTCTGGCATCAAGCTGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGATCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTg                                                                                         <  1:2273809/99‑1 (MQ=255)
            ggCTGTCTGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTgc                                                                                        <  2:535998/100‑1 (MQ=255)
              cTGTCTGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTgcgc                                                                                      >  1:2057696/1‑100 (MQ=255)
                 ncTGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTg                                                                                   >  1:118386/2‑100 (MQ=255)
                  cTGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTgg                                                                                  >  1:160586/1‑100 (MQ=255)
                   tGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGc                                                                                 <  1:1218279/100‑1 (MQ=255)
                   tGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGc                                                                                 <  1:2257262/100‑1 (MQ=255)
                   tGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGc                                                                                 <  1:831554/100‑1 (MQ=255)
                    ggCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCATTCCCCGCCTTCACACAGGTGGAATTTGCGCGTggag                                                                                >  2:754542/1‑98 (MQ=255)
                     gCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCga                                                                               <  1:267480/100‑1 (MQ=255)
                        tCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCgaga                                                                             <  1:2204064/99‑1 (MQ=255)
                        gcatcttgatgcCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGaa                                                                            >  2:531689/10‑100 (MQ=255)
                         cAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGaa                                                                            >  1:1367185/1‑99 (MQ=255)
                         cAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGCAt                                                                           >  1:2210227/1‑100 (MQ=255)
                             aTGCTGCCAGGCGCGTAATAACTGGTTGAGGATAGACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCATGGCGAGAATGTcc                                                                       >  1:250536/1‑100 (MQ=255)
                              tgctgcCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTccg                                                                      <  1:2250784/100‑1 (MQ=255)
                              tactgcCAGGCGCATAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTccg                                                                      >  2:1748622/3‑100 (MQ=255)
                               gctgcCCGGCGCGTAATAACTGGTTGAGGATAAACCGACTGGTGACCTTCCCTTCCCCGCCTTACCACGGGTGGAATTTGCGCGTGGCGCGAATGTcc                                                                       >  1:148680/1‑98 (MQ=255)
                               gctgcCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTccgc                                                                     >  1:582251/1‑100 (MQ=255)
                                ctgcCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTccgcc                                                                    >  1:2130443/1‑100 (MQ=255)
                                 tgcCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTccgccg                                                                   <  1:1113279/100‑1 (MQ=255)
                                    cAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCtt                                                                >  1:2459227/1‑100 (MQ=255)
                                    cAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCtt                                                                >  1:2512024/1‑100 (MQ=255)
                                    cAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCtt                                                                <  2:1732793/100‑1 (MQ=255)
                                      ggCGCGTAATAAATGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTg                                                              <  2:177852/100‑1 (MQ=255)
                                       gcgcGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGt                                                             >  1:709313/1‑100 (MQ=255)
                                        cgcgTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGt                                                             >  1:1161971/1‑99 (MQ=255)
                                        cgcgTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTc                                                            <  2:1123903/100‑1 (MQ=255)
                                        cgcgTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTc                                                            >  1:1575402/1‑100 (MQ=255)
                                          cgTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTg                                                          >  2:2114985/1‑100 (MQ=255)
                                          cgTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTg                                                          >  1:1334971/1‑100 (MQ=255)
                                           gTAATAACTTGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGc                                                         <  1:1843961/100‑1 (MQ=255)
                                            taataaCTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGcc                                                        >  2:1462782/1‑100 (MQ=255)
                                            taataaCTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGcc                                                        <  1:2393354/100‑1 (MQ=255)
                                             aataaCTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCt                                                       >  2:61703/1‑100 (MQ=255)
                                                aaCTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGAc                                                    >  1:52853/1‑100 (MQ=255)
                                                 aCTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGAcc                                                   >  1:1522222/1‑100 (MQ=255)
                                                  gaggTTGGGGATAACCTGACTGGTTACCTTCCCTTCCCCGGCTTCTCACGGGTGGAATTGGCGCGGGGCGAGAATGTCCGCCGCTTTGTCGGcgt                                                       >  1:214364/3‑93 (MQ=255)
                                                   tGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCg                                                 <  2:226148/100‑1 (MQ=255)
                                                     gTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCg                                                 >  1:543228/1‑98 (MQ=255)
                                                     gTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTg                                               <  2:2459244/100‑1 (MQ=255)
                                                     gTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTg                                               <  2:1339997/100‑1 (MQ=255)
                                                     gTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTg                                               <  2:1568243/100‑1 (MQ=255)
                                                     gTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTg                                               >  1:589336/1‑100 (MQ=255)
                                                       tGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTgag                                             >  1:1281436/1‑100 (MQ=255)
                                                       tGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAAGTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTgag                                             <  1:2546198/100‑1 (MQ=255)
                                                         aGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGAt                                           >  1:2285139/1‑100 (MQ=255)
                                                         aGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGAt                                           >  2:2106248/1‑100 (MQ=255)
                                                          ggATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATg                                          >  2:1233664/1‑100 (MQ=255)
                                                          ggATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATg                                          >  2:373976/1‑100 (MQ=255)
                                                            aTAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGcc                                        >  2:1369474/1‑100 (MQ=255)
                                                            aTAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGcc                                        <  1:102380/100‑1 (MQ=255)
                                                            aTAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGcc                                        <  2:158212/100‑1 (MQ=255)
                                                               aaCTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCcaca                                     <  1:131709/100‑1 (MQ=255)
                                                                  tgactgGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAAt                                  <  1:320857/100‑1 (MQ=255)
                                                                  tgactgGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAAt                                  <  2:2502260/100‑1 (MQ=255)
                                                                    actgGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTg                                <  1:2129268/100‑1 (MQ=255)
                                                                     ctgGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGa                               >  1:1519262/1‑100 (MQ=255)
                                                                     ctgGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGa                               >  2:1480008/1‑100 (MQ=255)
                                                                     ctgGTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGa                               <  2:1522231/100‑1 (MQ=255)
                                                                       ggTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGc                             <  2:531066/100‑1 (MQ=255)
                                                                       ggTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGc                             >  1:1018573/1‑100 (MQ=255)
                                                                       ggTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCAGTGAGATGCCACAAATTGAGc                             <  1:236744/100‑1 (MQ=255)
                                                                       ggTGACCTTCCCTTCCCCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGc                             >  1:2507058/1‑100 (MQ=255)
                                                                         tGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAg                           >  1:1624363/1‑100 (MQ=255)
                                                                          gACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGt                          >  1:401297/1‑100 (MQ=255)
                                                                            ccttcccttcCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTc                        >  2:1034204/1‑100 (MQ=255)
                                                                            ccttcccttcCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTc                        >  2:1034059/1‑100 (MQ=255)
                                                                            ccttcccttcCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTc                        >  2:2150476/1‑100 (MQ=255)
                                                                            ccttcccttcCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTc                        >  1:1075717/1‑100 (MQ=255)
                                                                             cttcccttccCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCt                       >  2:212800/1‑100 (MQ=255)
                                                                             cttcccttccCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCt                       >  2:268579/1‑100 (MQ=255)
                                                                               tcccttcccCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGc                     <  1:1783154/100‑1 (MQ=255)
                                                                               tcccttcccCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGc                     <  1:1075586/100‑1 (MQ=255)
                                                                                cccttcccCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTgn                     <  1:1921358/99‑2 (MQ=255)
                                                                                cccttcccCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCg                    >  1:1049891/1‑100 (MQ=255)
                                                                                cccttcccCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCg                    >  2:111555/1‑100 (MQ=255)
                                                                                 ccttcccCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTGTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCgg                   <  1:202568/100‑1 (MQ=255)
                                                                                  cttcccCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCGGt                  >  2:2011954/1‑100 (MQ=255)
                                                                                  cttcccCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCGGt                  >  1:1480368/1‑100 (MQ=255)
                                                                                  cttcccCGCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCGGt                  >  1:1201749/1‑100 (MQ=255)
                                                                                      cccGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCGGTCAtn              <  2:118387/100‑2 (MQ=255)
                                                                                      cccGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCGGTCATg              >  1:402897/1‑100 (MQ=255)
                                                                                       ccGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCGGTCATgt             >  2:179088/1‑100 (MQ=255)
                                                                                         gCCTTCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCGGTCATgtcg           <  2:2507077/100‑1 (MQ=255)
                                                                                            ttCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCGGTCATGtcgtcg        <  1:1951823/100‑1 (MQ=255)
                                                                                            ttCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCGGTCATGtcgtcg        <  1:2476327/100‑1 (MQ=255)
                                                                                            ttCCCACAGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCGGTCATGtcgtcg        <  1:832173/100‑1 (MQ=255)
                                                                                             tCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCGGTCATGTCGTcgc       >  2:828251/1‑100 (MQ=255)
                                                                                              cccACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCGGTCATGTCGTcgcg      >  2:359277/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
CAGGCCTGCTGCGGCTGTCTGGCATCAAGATGCTGCCAGGCGCGTAATAACTGGTTGAGGATAAACTGACTGGTGACCTTCCCTTCCCCGCCTTCCCACGGGTGGAATTTGCGCGTGGCGAGAATGTCCGCCGCTTTGTCTGCCTGACCCGTGAGATGCCACAAATTGAGCAGTTCTGCGGTCATGTCGTCGCGTTTC  >  NC_000913/2680014‑2680211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: