| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,770,319 | C→G | 16.5% | P206R (CCG→CGG) | yfjR → | CP4‑57 prophage; putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,770,319 | 0 | C | G | 16.5% | 300.8 / 51.2 | 115 | P206R (CCG→CGG) | yfjR | CP4‑57 prophage; putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (53/43); new base G (4/15); total (57/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.07e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.71e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
GGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTA > NC_000913/2770220‑2770418 | cATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCgg < 1:2067018/100‑1 (MQ=255) atatCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGt > 2:847610/1‑100 (MQ=255) atCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGATACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTCAAAAACCg > 2:74342/1‑96 (MQ=255) tCGCCGTATTCACACTTGATGAAATCCATCTAATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCtt < 1:2548096/100‑1 (MQ=255) gCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCttca > 2:786639/1‑100 (MQ=255) ccGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCttcat < 1:159980/100‑1 (MQ=255) gTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCGGGTCttcaacc < 1:2034440/100‑4 (MQ=255) ttCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAgg > 1:1256976/1‑100 (MQ=255) ttCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGAATGAAGACCGGGTCTTCAACCAgg < 2:2176120/100‑1 (MQ=38) ttCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATCACAGTCTGTGTCGCCTGGTTGAAGACCCTGTCttcattcatg < 2:1755171/100‑3 (MQ=255) tCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCGGGTCTTCAACCAGGc < 1:748616/100‑1 (MQ=255) tCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGAATGAAGACCGGGTCttcaaccaggc < 2:1353787/100‑8 (MQ=37) tCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGAATGAAGACCGGGTCttcaaccaggc < 2:520170/100‑8 (MQ=37) tCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGAATGAAGACCGGGTAttcaaccaggc < 1:1025648/100‑8 (MQ=37) tCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGAAGGAAGACCGGGTCttcaaccaggc < 2:2194998/100‑8 (MQ=38) tCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGACTGAATGAAGACCGGGTCttcaaccaggc < 1:1046141/100‑8 (MQ=37) cacaCTTGATGAAATCCATCTGATTCATCCGTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGAATGAAGACCGGGTCTTCAACCAGGcg < 2:1229403/100‑2 (MQ=37) cacaCTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGcc < 1:1673634/100‑1 (MQ=255) cacaCTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGcc > 1:1984477/1‑100 (MQ=255) cacaCTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGcc > 1:2151882/1‑100 (MQ=255) cacaCTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGAATGAAGACCGGGTCttcaaccaggcg < 2:2126175/100‑9 (MQ=37) acacTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGAATGAAGACCGGGTCttcaaccaggcga < 1:1642234/100‑10 (MQ=37) cacTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCtt > 1:2352973/1‑100 (MQ=255) cacTTGATGAAATCCATCTGATTAAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCt > 2:1540163/1‑99 (MQ=255) ttGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTAcc < 2:1426944/100‑1 (MQ=255) ttGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGAATGAAGACCGGGTCTTCAACCAGGcgacaca < 1:905753/100‑7 (MQ=25) tgatgaGATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGAATGAAGACCGGGTCTTCAACCAGGcgacacag < 1:393/100‑8 (MQ=25) tgatgaAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTAc > 1:1230182/1‑98 (MQ=255) tgatgaAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTCTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTAccc > 1:1832491/1‑100 (MQ=255) tgatgaAATCCATCTGATTCAGCCTTTGCAGGAGACGTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTAccc < 1:2203655/100‑1 (MQ=255) gatgaAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTAcccc < 2:1996823/100‑1 (MQ=255) atgaAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCa < 2:1822213/100‑1 (MQ=255) tgaAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCAt > 2:1816752/1‑100 (MQ=255) ccATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGc > 2:1892592/1‑100 (MQ=255) cATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCt < 1:275530/100‑1 (MQ=255) cATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCt > 1:1295007/1‑100 (MQ=255) cATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCt < 1:1545907/100‑1 (MQ=255) cATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCt < 1:1867898/100‑1 (MQ=255) cATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCt < 2:1132849/100‑1 (MQ=255) cATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGATTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCt > 1:1822159/1‑100 (MQ=255) cATCTGATTCAGCCTTTGCAGGAGACTTTGCGCTGCAATGACAGTCTGTGTCGCCAGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTAGc > 2:232594/1‑99 (MQ=255) aTCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCtt > 1:488160/1‑100 (MQ=255) aTCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCtt > 2:569018/1‑100 (MQ=255) tCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCttt > 2:90121/1‑100 (MQ=255) cTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTTAAGACGCGGTCTTCATTCAGGGCTTCCCCCATTTTCGCTTTa > 1:1158358/1‑100 (MQ=255) cTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTa > 2:1335809/1‑100 (MQ=255) tGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTAt < 2:2451764/100‑1 (MQ=255) aTTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATcc < 2:265935/100‑1 (MQ=255) cAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGc > 1:1837146/1‑100 (MQ=255) cAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGc > 1:642614/1‑100 (MQ=255) aGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTACATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCa < 2:1820335/100‑1 (MQ=255) gCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCAt < 1:273720/100‑1 (MQ=255) cTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTc > 2:2137912/1‑100 (MQ=255) cTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTc > 1:2115051/1‑100 (MQ=255) tttGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGCCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCa < 2:1821384/100‑1 (MQ=255) ttGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCAc < 2:143283/100‑1 (MQ=255) tGCAGGAGACTTTTCTCCGTATTGACAGTCTGTGTCTCCTGGTTTAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCAc < 1:1498474/99‑1 (MQ=255) cAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGc > 2:889697/1‑100 (MQ=255) cAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGc > 2:889776/1‑100 (MQ=255) cAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGc > 2:2476374/1‑100 (MQ=255) ggAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCtt > 1:1636375/1‑100 (MQ=255) gcagaCTTTTCGCCGCAATGACAGTCTGTCTCGCCTGGTTGAAGACCCGGTCTTCATTCAAGCCTTACCCCATTTTCGCTTTATCCAGCATTCCCTGCt > 1:991873/3‑99 (MQ=255) agaCTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTAc < 2:1149587/100‑1 (MQ=255) cTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGtt > 2:2267440/1‑100 (MQ=255) cTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGtt < 2:833606/100‑1 (MQ=255) tttCGCCGCAATGACAGTCTGTGTCGCCTTGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTg < 1:1518787/100‑1 (MQ=255) tttCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTg < 2:1636384/100‑1 (MQ=255) tttCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTg > 2:1100238/1‑100 (MQ=255) ngccgcAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTc > 1:259647/2‑100 (MQ=255) cgccgcAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTc > 2:1883423/1‑100 (MQ=255) gccgcAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTcc < 2:2422916/100‑1 (MQ=255) gccgcAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTcc < 2:257590/100‑1 (MQ=255) gcAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGc > 1:618960/1‑100 (MQ=255) cAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGcc < 1:1518969/100‑1 (MQ=255) aTGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTTTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCTCTGCTTACGTTTGTTCCGGCCg < 1:735185/99‑1 (MQ=255) tGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGAc < 1:434867/100‑1 (MQ=255) gACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACa < 2:1498005/100‑1 (MQ=255) aCAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACan < 1:1872487/100‑2 (MQ=255) aCAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAg > 1:2448790/1‑100 (MQ=255) cAGTCTGTGTCGCCTGGTTGAAGCCCCCGTCTTCATTCAGGCCTTACCCCATTTTCGCTTGATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGc < 2:117522/100‑1 (MQ=255) gTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGccc > 2:1594606/1‑100 (MQ=255) gTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGccc < 2:2543305/100‑1 (MQ=255) tgtgTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCAcc < 2:583103/100‑1 (MQ=255) tgtgTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCAcc > 2:345065/1‑100 (MQ=255) tCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGaa < 2:620688/100‑1 (MQ=255) ggcctgaatGAAGACCGGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAAt > 2:1791657/9‑100 (MQ=255) gcctgaatGAAGACCGGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATa > 2:376987/8‑100 (MQ=255) gcctgaatGAAGACCGGGTCTTCAACCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATa > 2:1061599/8‑100 (MQ=37) ccTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAg > 2:1083898/1‑100 (MQ=255) cTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAgc > 1:2444117/1‑100 (MQ=255) cTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAgc > 1:1791409/1‑100 (MQ=255) cTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAgc > 1:752990/1‑100 (MQ=255) gaatGAAGACCGGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAgcgc > 2:1515095/4‑100 (MQ=255) tGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAgg > 2:1364147/1‑100 (MQ=255) aaGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCg < 2:493414/100‑1 (MQ=255) aaGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCg > 1:872217/1‑100 (MQ=255) aGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTAACTGCTTACGTTTGTTTCGGCCGACAGCCCACCGGAATAGCGCAGGCgt > 1:1003812/1‑100 (MQ=255) gACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCgtt > 1:784085/1‑100 (MQ=255) cccGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACATCCCACCGGAATAGCGCAGGCgttgt > 2:2027790/1‑100 (MQ=255) cccGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCgttgt < 2:1800449/100‑1 (MQ=255) | GGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAGCGCAGGCGTTGTTA > NC_000913/2770220‑2770418 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |