| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,966,413 | A→T | 78.9% | D674E (GAT→GAA) | ptsP ← | PEP‑protein phosphotransferase enzyme I; GAF domain containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,966,413 | 0 | A | T | 78.9% | 207.7 / 48.8 | 99 | D674E (GAT→GAA) | ptsP | PEP‑protein phosphotransferase enzyme I; GAF domain containing protein |
| Reads supporting (aligned to +/- strand): ref base A (9/12); new base T (46/32); total (55/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.18e-01 | |||||||||||
CAATGCGCCGCAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGAAGACT > NC_000913/2966316‑2966511 | cAATGCGCCGCAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTc > 1:643804/1‑100 (MQ=255) aaTGCGCCGCAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTcg > 2:903570/1‑100 (MQ=255) aaTGCGCCGCAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTcg < 1:955017/100‑1 (MQ=255) gcgcCGCAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTcgccc > 2:1547874/1‑100 (MQ=255) cgccgcAGCAGGTATTTTGCCCGCGCTACTGAACGTCCGTTCATAGACAGATGGCGATTCCCAAGCCCAATGAGGATTGCCACGCACATGGGTTcgcccg < 2:1206665/100‑1 (MQ=255) cgccgcAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTcgcccg > 2:1244941/1‑100 (MQ=255) cgccgcAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTcgcccg > 2:1484417/1‑100 (MQ=255) cgcAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCa > 1:1468944/1‑100 (MQ=255) agcagGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATAGGTTCGCCCGCCAt > 1:1574978/1‑98 (MQ=255) gcagGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCAtttn < 1:1460710/100‑2 (MQ=255) gcagGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTc > 2:61026/1‑100 (MQ=255) gcagGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTc < 2:2308067/100‑1 (MQ=255) agGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCAc > 2:1930726/1‑100 (MQ=255) ggTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCAcc < 2:1310677/100‑1 (MQ=255) ggTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCAcc < 1:840462/100‑1 (MQ=255) gTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCg < 2:1915166/100‑1 (MQ=255) gTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCg > 2:2235099/1‑100 (MQ=255) tATTTTGCCCGCGCTACAGAACGTCCGTTCATATACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGAGTTCGCCCGACATTTCACCGc > 1:852039/1‑100 (MQ=255) tATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGc > 2:720909/1‑100 (MQ=255) ttttGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGcac < 2:798818/100‑1 (MQ=255) tttGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGcaca > 1:1839713/1‑100 (MQ=255) tGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACaaa > 1:1800304/1‑100 (MQ=255) ccGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACgg > 1:1112798/1‑100 (MQ=255) cgcgCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGga < 2:1914892/100‑1 (MQ=255) cTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATc < 2:1606498/100‑1 (MQ=255) cTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATc > 2:2293899/1‑100 (MQ=255) cTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATc < 2:294762/100‑1 (MQ=255) cTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATc > 1:630454/1‑100 (MQ=255) tACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCg > 2:1922640/1‑100 (MQ=255) aCAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACACACGCAGATCg > 1:92128/1‑99 (MQ=255) aCAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGa > 1:1345634/1‑100 (MQ=255) aCAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGa > 1:191280/1‑100 (MQ=255) aaCGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACTGCACAAACGGAGATCGATTcc > 2:1456650/1‑100 (MQ=255) aCGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCa < 2:1261008/100‑1 (MQ=255) cGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCAt < 2:1864539/100‑1 (MQ=255) tCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGt < 1:2561279/100‑1 (MQ=255) cGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTAt > 2:1672971/1‑100 (MQ=255) cATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTcc < 2:2227317/100‑1 (MQ=255) aTAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCg < 2:2260076/100‑1 (MQ=255) aTAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCg > 2:680412/1‑100 (MQ=255) tAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGc > 1:1288718/1‑100 (MQ=255) tAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGc > 2:2408936/1‑100 (MQ=255) tAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGc < 2:519082/100‑1 (MQ=255) tAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGc > 2:955271/1‑100 (MQ=255) tAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGc < 2:1287218/100‑1 (MQ=255) tAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGACCGATTCCATGCATTTCCg > 2:2161575/1‑99 (MQ=255) tAGACAGATGGCGATACCCAAGCCCAATAAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGc > 1:2475229/1‑100 (MQ=255) aGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCt < 2:920295/100‑1 (MQ=255) gACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCtt > 2:2123986/1‑100 (MQ=255) cAGATGACGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATACCATGTATTTCCGCTTcc < 1:1471763/100‑1 (MQ=255) aTGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCgg > 2:2158979/1‑100 (MQ=255) aTGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCgg < 1:1595947/100‑1 (MQ=255) tGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACACACGGAGATCGATTCCATGTATTTCCGCTTCCCggg < 1:867196/100‑1 (MQ=255) ggCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGc < 1:747656/100‑1 (MQ=255) ggCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGc < 1:2303208/100‑1 (MQ=255) cGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGa > 2:463234/1‑100 (MQ=255) gATACCCAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGat < 2:1112802/100‑1 (MQ=255) tACCCCAGCCCAATGAGGATTGCAACGCACTTGGGTTCGCCCGCCATTTCACCGCACAAACGTAGATCGATTCCATGTATTTCCGCTTCCCGGGCGa < 1:847028/97‑1 (MQ=255) tACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGatca > 2:1550628/1‑100 (MQ=255) cccAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGatcatc > 2:1555593/1‑100 (MQ=255) cccAAGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGatcatc > 2:2287747/1‑100 (MQ=255) cccAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGatcatc < 1:2139471/100‑1 (MQ=255) cccAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGatcagc > 1:1568149/1‑98 (MQ=255) aaGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGcc < 2:125603/100‑1 (MQ=255) aGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCa < 2:603674/100‑1 (MQ=255) aGCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCa < 1:2224656/100‑1 (MQ=255) gCCCAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCag > 2:1993795/1‑100 (MQ=255) cAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGc > 1:1052525/1‑100 (MQ=255) cAATGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGAAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGc > 1:2282401/1‑100 (MQ=255) cAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGc < 1:1263339/100‑1 (MQ=255) aaTGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCt > 2:1558738/1‑100 (MQ=255) tGAGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCg < 1:1930716/100‑1 (MQ=255) aGGATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTa > 2:74466/1‑100 (MQ=255) ggATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTaa < 1:2149103/100‑1 (MQ=255) gATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTatc < 2:1746348/100‑3 (MQ=255) gATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAAc < 2:41784/100‑1 (MQ=255) gATTGCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAAc < 2:2173685/100‑1 (MQ=255) gATTGCCACGCACATGGGTTCCGCCGCCATTGCACCGTACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTaan < 1:1748713/100‑2 (MQ=255) gCCACGCACATGGGTTCGCCCGCCATTTCACCGCACACACGGAGATCGATTCCATGTGTTTCCGCTTCCCGGGGGCTCACCGCAAGAGCCCGGAACa > 1:540308/1‑97 (MQ=255) gCCACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTg > 2:2513477/1‑100 (MQ=255) gCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTg > 2:1357374/1‑100 (MQ=255) ccACGCACCGGGGTTCGCCCGCAATTTCTCCGCACCCACGGAGATCGATTCCATGTATTTCCGATTCCCGGGCGATCATCGCCAGAGCGCGTAACAtt < 1:824733/98‑1 (MQ=255) cACGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTACCATTGc > 1:1605904/1‑99 (MQ=255) cACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCa < 2:2421337/100‑1 (MQ=255) cACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGATTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCa > 1:2078140/1‑100 (MQ=255) aCGCACATGGGTTCGCCCGCCATTTCCCCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAg < 1:369501/100‑1 (MQ=255) aCGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAg < 2:1812922/100‑1 (MQ=255) aCGCACATGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAg < 2:1459873/100‑1 (MQ=255) cGCACATGGGATCGCCCGCCATTTCACCGCGCACACGGAGATCGATTCCAGGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATGGCAgg < 1:2113529/100‑1 (MQ=255) cacaTGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGAt > 2:438030/1‑100 (MQ=255) cacaTGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGAt > 1:289330/1‑100 (MQ=255) caTGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAg > 1:597849/1‑95 (MQ=255) caTGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGACCATCGCCAGAGCTCGTAACATTGCAGGATGa > 2:1839195/1‑100 (MQ=255) caTGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGa < 1:1749822/100‑1 (MQ=255) tGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGaa > 2:1772570/1‑99 (MQ=255) tGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGAAg > 1:1475120/1‑100 (MQ=255) tGGGTTCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCCCGTAACATTGCCGGATGAAg > 2:1772501/1‑100 (MQ=255) gggATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGAAGa > 2:104895/1‑100 (MQ=255) gATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGAAGACt > 2:2505533/1‑100 (MQ=255) | CAATGCGCCGCAGCAGGTATTTTGCCCGCGCTACAGAACGTCCGTTCATAGACAGATGGCGATACCCAAGCCCAATGAGGATTGCCACGCACATGGGATCGCCCGCCATTTCACCGCACAAACGGAGATCGATTCCATGTATTTCCGCTTCCCGGGCGATCATCGCCAGAGCTCGTAACATTGCAGGATGAAGACT > NC_000913/2966316‑2966511 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |