| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 55,620 | A→G | 79.0% | M497T (ATG→ACG) | lptD ← | LPS assembly OM complex LptDE, beta‑barrel component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 55,620 | 0 | A | G | 79.0% | 221.6 / 51.0 | 110 | M497T (ATG→ACG) | lptD | LPS assembly OM complex LptDE, beta‑barrel component |
| Reads supporting (aligned to +/- strand): ref base A (12/11); new base G (52/34); total (64/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.91e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
AGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGAGTTATACC > NC_000913/55522‑55716 | aGTCGTAGTTATAGATGTCGCTCTAACCGCGATACGGCACGTACAAATACTGCTCGCGCGGTTCCAGCGTTTGGGTATATCCCGGAGCCAGCATTTCCat < 1:1578609/100‑1 (MQ=255) cGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATc > 1:2072669/1‑100 (MQ=255) cGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATc > 2:1858440/1‑100 (MQ=255) gTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATcg > 2:1704790/1‑100 (MQ=255) tAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATcac < 2:1754784/100‑3 (MQ=255) aGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATcgcg > 1:74791/1‑100 (MQ=255) gTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGt > 2:1044319/1‑100 (MQ=255) gTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGt < 2:2070049/100‑1 (MQ=255) gTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGt > 1:351821/1‑100 (MQ=255) taGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCaa < 1:2063691/100‑1 (MQ=255) taGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCaa > 1:2481765/1‑100 (MQ=255) taGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCaa > 1:1730479/1‑100 (MQ=255) aGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCaaa > 2:252564/1‑100 (MQ=255) gATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTCCAAAg < 1:2373854/100‑1 (MQ=255) aTGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGa > 2:1398572/1‑100 (MQ=255) tGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGAc > 2:2095786/1‑100 (MQ=255) tGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGAc > 1:1366413/1‑100 (MQ=255) tCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCa > 1:2499448/1‑100 (MQ=255) tCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCa > 1:730835/1‑100 (MQ=255) cGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCAt > 2:2329551/1‑100 (MQ=255) cGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCAt > 2:1587746/1‑100 (MQ=255) gCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCAtt > 1:194915/1‑100 (MQ=255) ctctGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCAttt > 1:1969029/1‑100 (MQ=255) ctctGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCAttt < 1:1220451/100‑1 (MQ=255) tctGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCAtttt < 2:1532610/100‑1 (MQ=255) gATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGcc > 2:2314593/1‑100 (MQ=255) gATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGcc > 1:2453705/1‑100 (MQ=255) gATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGcc > 2:1289385/1‑100 (MQ=255) gATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGcc > 2:1788036/1‑100 (MQ=255) aTCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCg < 2:2495610/100‑1 (MQ=255) tCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGt < 1:1463421/100‑1 (MQ=255) tCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCg < 1:1727751/99‑1 (MQ=255) cgATACTTCATGTACAAATAAAGCGAGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACTATTTTTCCTTCaa > 1:1196777/1‑100 (MQ=255) cgATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCaa > 2:826251/1‑100 (MQ=255) aTACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACt < 1:2095772/100‑1 (MQ=255) tACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACtt > 2:610696/1‑100 (MQ=255) aCGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCCACttt > 1:1136010/1‑100 (MQ=255) cGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACtgtg < 1:300479/100‑1 (MQ=255) gCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGaa > 1:531478/1‑100 (MQ=255) cACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAAt < 1:1659698/100‑1 (MQ=255) cGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTg > 2:86997/1‑100 (MQ=255) cGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTg > 2:2408008/1‑100 (MQ=255) tACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGCCCATTTTGTCGTCAACTTTGAATTGc > 2:1284742/1‑99 (MQ=255) tACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCg > 2:577856/1‑100 (MQ=255) cAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGc < 2:327486/100‑1 (MQ=255) cAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGc > 1:1086553/1‑100 (MQ=255) aaTACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCAt > 1:653574/1‑100 (MQ=255) cTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTAcg > 2:2481249/1‑100 (MQ=255) cgcgcgcgGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCgg < 2:627397/100‑1 (MQ=255) cgcgcgcgGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCgg < 2:1701402/100‑1 (MQ=255) gcgcgGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTa < 2:644261/100‑1 (MQ=255) cgcgGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTaa > 2:1547250/1‑100 (MQ=255) cgcgGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTaa > 2:2239072/1‑100 (MQ=255) cgGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACg < 2:2034584/100‑1 (MQ=255) ggTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACgg < 2:2042725/100‑1 (MQ=255) gTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGCATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGGATTGCGGCATTACGCGGTTAACGGa > 1:2201464/1‑100 (MQ=255) ttCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGGCAACTTTGAATTGCGGCATTACGCGGTTAACGGAt < 1:2251583/100‑1 (MQ=255) tCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGAtt < 1:1528740/100‑1 (MQ=255) cAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCg > 1:1685019/1‑100 (MQ=255) cAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACAATTTGGCCGTCAACTTTGAATTGCGGAATTACGCGGTTAACGGATTCg > 2:2364590/1‑100 (MQ=255) cAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCg > 1:798188/1‑100 (MQ=255) cAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCg < 2:1421464/100‑1 (MQ=255) aGCGTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCg < 2:1132485/99‑1 (MQ=255) gTTTGGGTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCa < 1:2314579/100‑1 (MQ=255) tGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCt < 2:1136206/100‑1 (MQ=255) gggTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCtt > 2:1929229/1‑100 (MQ=255) ggTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTg > 2:1086133/1‑100 (MQ=255) ggTATAACCCGGAGCCAGCATTTCCGTATCGAGTTCAAAGACCATTTTGCCGTCATCTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCt < 1:1786148/98‑1 (MQ=255) ggataACCCTGAGGCAGCAGTTCCTTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTgg < 2:1119693/98‑1 (MQ=255) gTATAACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTgg > 1:1755587/1‑100 (MQ=255) taACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCg > 1:995251/1‑100 (MQ=255) taACCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCg < 1:826248/100‑1 (MQ=255) taACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCg < 1:975785/100‑1 (MQ=255) taACCCGGAGCCAGCATCTCCGTATCGCGGGCAAAGACCACCTCGCCGACATCTTTGAATTGCGGCATTACGGGGTTAACGGATTGTTCCAGCTTGGTc > 1:1990190/1‑99 (MQ=255) naaCCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCg > 1:904951/2‑100 (MQ=255) aaCCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCgt > 1:649296/1‑100 (MQ=255) aaCCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCgt > 2:1965186/1‑100 (MQ=255) aCCCGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTCCGCGGTTAACGGATTCGTCCAGCTTGGTCgtg < 2:1377534/100‑1 (MQ=255) cccGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCgtgt > 1:338458/1‑100 (MQ=255) ccGGAGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGtt < 2:851853/100‑1 (MQ=255) aGCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTg > 1:1373921/1‑100 (MQ=255) gCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTgg < 2:2362905/100‑1 (MQ=255) gCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTgg < 2:1086557/100‑1 (MQ=255) gCCAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTg > 2:292140/1‑99 (MQ=255) ccAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGa > 2:1726449/1‑100 (MQ=255) ccAGCATTTCCGGATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCAGTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGa < 1:287133/100‑1 (MQ=255) ccAGCATGTCCGTATCGCGTTCAAAGACCACTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGa < 2:1229636/100‑1 (MQ=255) cAGCGTTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAAGTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGCCGTGTTTCTGGAg < 1:335670/100‑1 (MQ=255) cAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGAg > 2:2145633/1‑100 (MQ=255) cAGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCACTCCGCCGTTAACGGATCCCTCCAGCCTGGCCGTCTTTc > 1:408448/1‑95 (MQ=255) atcATTTCCGTATAGCGTTCAAAGACCATTTTGCCGTCAACTGTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGAGt > 2:1754573/3‑100 (MQ=255) aGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGAg > 1:633923/1‑99 (MQ=255) aGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGAGt > 1:327201/1‑100 (MQ=255) aGCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGAGt < 1:67705/100‑1 (MQ=255) gCATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGAGtt > 2:182250/1‑100 (MQ=255) gCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGAGtt < 2:2379618/100‑1 (MQ=255) cATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGAGTta > 2:2233559/1‑100 (MQ=255) cATTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGAGTta < 2:1373929/100‑1 (MQ=255) cATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTCCCGTCTTCGTCCAGCTTGGTCGTGTTTCTGGAGtt > 1:2086987/1‑99 (MQ=255) aTTTCCGTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGAGt < 1:1090158/97‑1 (MQ=255) | AGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGCGGTTAACGGATTCGTCCAGCTTGGTCGTGTTTCTGGAGTTATACC > NC_000913/55522‑55716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |