| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,167,075 | T→C | 19.1% | D215G (GAT→GGT) | ygiS ← | putative ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,167,075 | 0 | T | C | 19.1% | 199.5 / 39.3 | 99 | D215G (GAT→GGT) | ygiS | putative ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (37/43); new base C (10/9); total (47/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCTAGCGCCAGATACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGAACAGCGTCGGC > NC_000913/3166976‑3167173 | tCTAGCGCCAGATACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGAt > 2:758989/1‑100 (MQ=255) cTAGCGCCAGATACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATc > 1:69992/1‑100 (MQ=255) cTAGCGCCAGATACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATc > 2:2202788/1‑100 (MQ=255) cTAGCGCCAGATACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATc < 2:2563481/100‑1 (MQ=255) tAGCGCCAGATACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCa < 2:2402598/100‑1 (MQ=255) tAGCGCCAGATACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCa > 2:2542719/1‑100 (MQ=255) cgcCAGATACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGc > 1:685098/1‑100 (MQ=255) ccAGATACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTCCCCACTGACCAAGcac > 2:2258720/1‑100 (MQ=255) ccAGATACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGcac < 2:2086674/100‑1 (MQ=255) gATACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACaaa > 2:501042/1‑100 (MQ=255) tACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAgg > 1:410326/1‑100 (MQ=255) tACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAgg > 1:623092/1‑100 (MQ=255) tACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGACCAAGCACAAAgg < 1:692265/100‑1 (MQ=255) aCTCGACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATCTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGc < 1:1269934/100‑1 (MQ=255) cTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCa > 2:2374206/1‑100 (MQ=255) cTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATATTTGCGTGCAGTAATCTTTTCATTAACTACCCACTGCTCACGCACCAAgg < 1:1025099/98‑1 (MQ=255) cAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCAcc > 1:558751/1‑100 (MQ=255) cAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGACCAAGCACAAAGGCAcc > 1:1291330/1‑100 (MQ=255) aCCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGt < 1:758986/100‑1 (MQ=255) aCCTGTTGCAATACTGTATGTTGCGCATCGCGGTACCTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCCCTGACCAAGCACAAAGGCACCGt > 1:2472403/1‑100 (MQ=255) ccTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGt < 1:220823/99‑1 (MQ=255) tGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGACCAAGCACAAAGGCACCGTTGt < 2:905317/100‑1 (MQ=255) tGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGACCAAGCACAAAGGCACCGTTGt < 1:2501124/100‑1 (MQ=255) gTTGCAATACTGTATGGTGCGCATCGCGGTACTTGGGATTTTTGCGTGCAGTAATCTTTGCGTTAACTACCCACGGATCAAGCGCAAAGGCACCGTTGTa < 1:502377/100‑1 (MQ=255) gCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAAc > 2:652403/1‑100 (MQ=255) gCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGACCAAGCACAAAGGCACCGTTGTAAAc > 2:1882161/1‑100 (MQ=255) cAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATGTTTTCGTTAACTACCCACTGACCAAGCACAAAGGCACCGTTGTAAAcc > 1:1445788/1‑100 (MQ=255) cAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAAcc > 1:106233/1‑100 (MQ=255) cAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAAcc < 2:619704/100‑1 (MQ=255) cAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAAcc > 1:553098/1‑100 (MQ=255) cAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAAcc > 1:771919/1‑100 (MQ=255) cAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGACCAAGCACAAAGGCACCGTTGTAAAcc > 2:980676/1‑100 (MQ=255) aaTACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAAcc < 2:679318/99‑1 (MQ=255) tGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTtc < 1:2537668/100‑1 (MQ=255) gTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTtct > 1:2220012/1‑100 (MQ=255) tATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTtctc > 1:26912/1‑100 (MQ=255) gTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTgg < 2:2115185/100‑1 (MQ=255) gTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTgg > 2:1237631/1‑100 (MQ=255) gTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTgg < 2:1318462/100‑1 (MQ=255) tGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGGTCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCt < 1:208010/100‑1 (MQ=255) tGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCt < 2:1060002/100‑1 (MQ=255) tGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCt < 2:349154/100‑1 (MQ=255) tGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCt < 1:623095/100‑1 (MQ=255) tGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCt < 2:1544529/100‑1 (MQ=255) tGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAAGCTTTTCGTTAACTACCCACTGACCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCt > 1:1386998/1‑100 (MQ=255) gcgcATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCtt < 1:400894/100‑1 (MQ=255) cATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACt < 1:73704/100‑1 (MQ=255) aTCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTc > 1:2456551/1‑100 (MQ=255) tCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTcc < 1:378623/100‑1 (MQ=255) gcgGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAg > 2:814098/1‑100 (MQ=255) gcgGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAg > 2:686348/1‑100 (MQ=255) tttGGCTTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTATAAACCATGTTCTCTGGCTTACTCCAGCTATCGc > 1:1294032/1‑100 (MQ=255) ttGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGcc < 2:1621206/100‑1 (MQ=255) ttGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGcc > 1:1725871/1‑100 (MQ=255) tGGATTTTTGCGTGCAGTAATCTTTTCGTTAATTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCa < 2:464782/100‑1 (MQ=255) gATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATg > 2:676693/1‑100 (MQ=255) tttttGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGtt > 2:1344081/1‑100 (MQ=255) ttGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAg < 2:647780/100‑1 (MQ=255) tGCGTGCAGTAATCTTTTCGTTAACTACCCACTGCTCAAGCTCAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGc < 2:567630/100‑1 (MQ=255) tGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGc < 2:1256790/100‑1 (MQ=255) tGCAGTAATCTTTTCGTTAACTACCCACTGACCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATg < 2:185760/100‑1 (MQ=255) cAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGAc < 1:721669/100‑1 (MQ=255) cAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCGTAATTCAGCTATCGCCATGTTTAGCGATGAc > 1:985725/1‑100 (MQ=255) cAGTAATCTCTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGAc < 1:852259/100‑1 (MQ=255) aGTAATCTTTTCGTTAACTACCCACTGGCCAAGCACAAGTGCACCGTTGTAAACCATGTGCTCTGGCTTAGTCCAGCTATCGCCATGTTTAGCGATGAc < 1:141215/99‑1 (MQ=255) gTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACat < 2:1621522/100‑1 (MQ=255) aaTCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACatga < 1:1921485/100‑1 (MQ=255) aaTCTTTTCGTTAACTACCCACTGACCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACatga < 1:852033/100‑1 (MQ=255) tCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACatgatg < 2:1874382/100‑1 (MQ=255) tCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACatgatg < 1:52770/100‑1 (MQ=255) tCTTTTCGTTAACTACCCACTGACCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACatgatg > 2:704180/1‑100 (MQ=255) cTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACAtgatga < 1:1796559/100‑1 (MQ=255) cTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACAtgatga < 2:819554/100‑1 (MQ=255) tttCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAgg < 2:1230257/100‑1 (MQ=255) tttCGTTAACTACCCACTGACCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAgg < 1:1297117/100‑1 (MQ=255) ttCGTTAACTAACCACTGATCAAGCACAAAGGAACCGTTGTAAACCATGTTCTCTGGCTTAATCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGa < 1:926622/100‑1 (MQ=255) tCGTTAACTCCCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGa > 1:712551/1‑99 (MQ=255) tCGTTAACTACCCACTGACCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGaa > 2:2577775/1‑100 (MQ=255) cGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAAc > 1:2056377/1‑100 (MQ=255) gTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAAcc > 2:2348611/1‑100 (MQ=255) tAACTCCCCACTGATCAAGCACCAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTGTGGCCATGTTTAGCGATGACATGATGAGGAAGCgg < 1:1969683/100‑1 (MQ=255) aaCTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCggg > 2:1561540/1‑100 (MQ=255) aaCTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCggg > 1:2537796/1‑100 (MQ=255) aCTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGa < 2:2537815/100‑1 (MQ=255) aCTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGa < 2:1064532/100‑1 (MQ=255) aCTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGa > 2:1044422/1‑100 (MQ=255) aCTACCCACTGACCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGa < 1:1201805/100‑1 (MQ=255) tACCCACTGATCAAGCACAAAGCCACCGGTGTAAACCATGTTCTCTGGCTTACTACAGCCATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGAAc < 2:673912/100‑1 (MQ=255) tACCCACTGACCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTAGCGCCATGTTTAGCGATGACATGATGAGGAACCGGGAAc < 1:36245/100‑1 (MQ=255) atctcACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGAAc < 2:1047426/96‑1 (MQ=255) aCCCACTGATCAAGCACAACGGCACCGTTGTAAACCATGTTCTCTGCCTTACTCCAGCTATCGCCATATTTAGCGATGACATGCTGAGGAACCGGGAAc > 1:755628/1‑99 (MQ=255) aCCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGAACa > 1:2519997/1‑100 (MQ=255) cccACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGAACAg < 1:2542700/100‑1 (MQ=255) cACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGAACAgat > 1:1047423/1‑98 (MQ=255) cACTGACCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGAACAGCg > 2:2360730/1‑100 (MQ=255) tGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGAACAGCGTCg < 2:2056390/100‑1 (MQ=255) gATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGAACATCGTCgg > 1:968114/1‑100 (MQ=255) gATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGAACAGCGTCgg > 1:1324803/1‑100 (MQ=255) aTCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGAACAGCGTCGGc > 2:1700651/1‑100 (MQ=255) aTCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGAACAGCGTCGGc > 1:1242941/1‑100 (MQ=255) | TCTAGCGCCAGATACTCAACCTGTTGCAATACTGTATGTTGCGCATCGCGGTACTTTGGATTTTTGCGTGCAGTAATCTTTTCGTTAACTACCCACTGATCAAGCACAAAGGCACCGTTGTAAACCATGTTCTCTGGCTTACTCCAGCTATCGCCATGTTTAGCGATGACATGATGAGGAACCGGGAACAGCGTCGGC > NC_000913/3166976‑3167173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |