| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 418,691 | C→T | 19.0% | A268V (GCC→GTC) | phoR → | sensory histidine kinase in two‑component regulatory system with PhoB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 418,691 | 0 | C | T | 19.0% | 236.6 / 45.5 | 111 | A268V (GCC→GTC) | phoR | sensory histidine kinase in two‑component regulatory system with PhoB |
| Reads supporting (aligned to +/- strand): ref base C (40/49); new base T (14/7); total (55/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.15e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.10e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
AAGGCGCGGTACGCGAAAAAGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGAAAAAACAGACA > NC_000913/418592‑418788 | aaGGCGCGGTACGCGAAAAAGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGc > 1:1996623/1‑100 (MQ=255)aaGGCGCGGTACGCGAAAAAGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGc > 2:533021/1‑100 (MQ=255) gcgcGGTACGCGAAAAAGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGTCGc < 2:865495/100‑1 (MQ=255) cgcgGTACGCGAAAAAGCGTTGCACACCATGCGCGAGCAGCCCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGCCGAAAATAGAAGCCGCa < 1:2238226/100‑1 (MQ=255) gcgGTACGCGAAAAAGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCAc < 2:1297633/100‑1 (MQ=255) cgGTACGCGAAAAAGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCAcc > 2:2027684/1‑100 (MQ=255) cagTAGGCGAAAAAGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCAcc < 1:1008536/98‑1 (MQ=255) ggTACGCGAAAAAGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGTCGCTGTCGAAAATAGAAGCCGCACCg < 2:1574608/100‑1 (MQ=255) gTACGCGAAAAAGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGa < 1:1095961/100‑1 (MQ=255) aCGCGAAAAAGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACg < 2:819842/100‑1 (MQ=255) cttccgatcttGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGTCGCACCGACGCAtt < 1:851871/91‑1 (MQ=255) aaaaaGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCAttt < 2:1734891/100‑1 (MQ=255) aaaaGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTg > 2:1096664/1‑100 (MQ=255) aGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGACGCAATTGCTGACGCTGTCGAAAATAGAAGTCGCACCGACGCATTTGCTc > 1:156911/1‑100 (MQ=255) gCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAACATAGAAGCCGCACCGACGCATTTGCTCa > 1:190631/1‑100 (MQ=255) gCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGTCGCACCGACGCATTTGCTCa > 1:880553/1‑100 (MQ=255) gCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCa > 2:2354796/1‑100 (MQ=255) cttGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGTCGCACCGACGCATTTGCTCAAt < 1:282290/99‑1 (MQ=255) ttGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATg < 2:1140660/100‑1 (MQ=255) tGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGTCGCACCGACGCAttagatcggaag > 2:851874/1‑90 (MQ=255) tGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGTCGCACCGACGCATTTGCTCAAtag > 2:282293/1‑98 (MQ=255) gCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGaa > 2:1830694/1‑100 (MQ=255) cacaCCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGTCGCACCGACGCATTTGCTCAATGaaa > 1:1344871/1‑100 (MQ=255) acacCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGaaaa > 2:2344669/1‑100 (MQ=255) cacCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAg > 2:2362305/1‑100 (MQ=255) cacCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAg > 1:74672/1‑100 (MQ=255) acCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAgg < 1:678026/100‑1 (MQ=255) cATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGtt < 2:1800912/100‑1 (MQ=255) cATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGtt < 2:717584/100‑1 (MQ=255) aTGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTg < 1:254661/100‑1 (MQ=255) tGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGa > 2:615299/1‑100 (MQ=255) tGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGa < 1:903757/100‑1 (MQ=255) tGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGa > 1:423278/1‑100 (MQ=255) gcgcGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGAt > 2:857946/1‑100 (MQ=255) gcgcGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGAt < 2:1515157/100‑1 (MQ=255) cgcgAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGTCGCACCGACGCATTTGCTCAATGAAAAGGTTGAtg > 2:1557582/1‑100 (MQ=255) cgcgAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGAtg < 2:2086202/100‑1 (MQ=255) gcgAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGAtgt > 1:49750/1‑100 (MQ=255) gcgAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGAtgt > 1:769619/1‑100 (MQ=255) gAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGTCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGc < 1:991519/100‑1 (MQ=255) cAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCga < 1:1283880/100‑1 (MQ=255) cAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCga > 1:634084/1‑100 (MQ=255) aGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCgat > 2:2258305/1‑100 (MQ=255) gACCCAGCGGATTGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCgat < 1:666614/99‑1 (MQ=255) gACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCCTTTGCTCAATGAAAAGGTTGATGTGCCgatg > 2:1284267/1‑100 (MQ=255) gACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCgatg > 1:1871098/1‑100 (MQ=255) gACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCgatg < 2:1721879/100‑1 (MQ=255) gACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCgatg > 1:988943/1‑100 (MQ=255) gACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGATTGCTGTGCCga > 1:1760544/1‑98 (MQ=255) aCCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCgatga < 2:2542575/100‑1 (MQ=255) aCCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCgatga > 1:2036226/1‑100 (MQ=255) nccAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGACGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCgatgat > 1:2318121/2‑100 (MQ=255) cccAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCgatgat > 2:240793/1‑100 (MQ=255) cccAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCgatgat < 1:1755351/100‑1 (MQ=255) gAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGTCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCgttg > 1:1779337/1‑100 (MQ=255) aaGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCgttgt < 2:356743/100‑1 (MQ=255) aGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCgttgtt > 2:1763252/1‑100 (MQ=255) ggACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAGGGTTGATGTGCCGATGATGCTGCGCGttgttg < 2:2460807/100‑1 (MQ=255) ggACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGttgttg < 2:2581434/100‑1 (MQ=255) ggACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGttgttg < 1:1646358/100‑1 (MQ=255) ggACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGttgttg < 1:396812/100‑1 (MQ=255) aCTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAg > 1:291403/1‑100 (MQ=255) cTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAgc < 2:1700676/100‑1 (MQ=255) ggTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAgcgc > 2:283496/1‑100 (MQ=255) gatGAAGCAATTGATGACGCTGTCGAAAATACAAGTCGCACCAACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAgcgc > 2:1747988/3‑100 (MQ=255) tGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGa < 1:1172767/100‑1 (MQ=255) tGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGATCAATGAAAAGGTTGATGTGCCGATGATGCTGCGAGTTGTTGAgcgcaa > 1:604614/1‑98 (MQ=255) gAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAg < 2:2132881/100‑1 (MQ=255) gAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAg > 2:108859/1‑100 (MQ=255) aaGAAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAgg > 1:212772/1‑100 (MQ=255) aGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGc < 1:573087/100‑1 (MQ=255) gCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCt > 1:2437668/1‑100 (MQ=255) aaTTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCa > 2:391322/1‑100 (MQ=255) tGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGAc < 2:943259/100‑1 (MQ=255) gCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGAct > 2:1162904/1‑100 (MQ=255) cTGACGCTGTCGAAAATAGAAGTCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGActc > 1:774991/1‑100 (MQ=255) cTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGActc > 2:735895/1‑100 (MQ=255) tGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGActct > 1:1960992/1‑100 (MQ=255) gACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTg < 2:775304/100‑1 (MQ=255) gACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTg < 2:1244268/100‑1 (MQ=255) gACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTg > 1:558232/1‑100 (MQ=255) gACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGGTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTg > 1:776338/1‑100 (MQ=255) cGCTGTCGAAAATAGAAGTCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAg > 2:700737/1‑100 (MQ=255) cggTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTc > 2:1755719/3‑100 (MQ=255) cTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTc < 1:2567999/100‑1 (MQ=255) gTCGAAAATAGAAGTCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAg < 1:1077496/100‑1 (MQ=255) gTCGAAAATAGAAGTCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAg > 1:528088/1‑100 (MQ=255) gTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAg < 1:1127915/100‑1 (MQ=255) tCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGa < 2:1724424/100‑1 (MQ=255) cGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGaa > 1:396470/1‑100 (MQ=255) aaaaTAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGaaaa < 2:198239/100‑1 (MQ=255) aaaTAGAAGTCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGaaaaa > 1:1322449/1‑100 (MQ=255) aagaGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGaaaaaa < 1:2399301/97‑1 (MQ=255) ataccaGCCGCAACGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGAAAAAAc < 2:2466708/95‑1 (MQ=255) aTAGAAGCCGCCCCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGAAAAAAc < 1:857943/100‑1 (MQ=255) tAGAAGTCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGAAAAAACa < 2:833765/100‑1 (MQ=255) tAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGAAAAAACa < 1:2119258/100‑1 (MQ=255) gAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGAAAAAACAGa > 2:2368412/1‑100 (MQ=255) aaGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGAAAAAACAGAc < 2:288211/100‑1 (MQ=255) aGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGAAAAAACAGACa < 2:423280/100‑1 (MQ=255) | AAGGCGCGGTACGCGAAAAAGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGAAAAAACAGACA > NC_000913/418592‑418788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |